1NWB,1S98,2D2A


Conserved Protein Domain Family
TIGR00049

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TIGR00049: TIGR00049 
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Iron-sulfur cluster assembly accessory protein
Proteins in this subfamily appear to be associated with the process of FeS-cluster assembly. The HesB proteins are associated with the nif gene cluster and the Rhizobium gene IscN has been shown to be required for nitrogen fixation. Nitrogenase includes multiple FeS clusters and many genes for their assembly. The E. coli SufA protein is associated with SufS, a NifS homolog and SufD which are involved in the FeS cluster assembly of the FhnF protein. The Azotobacter protein IscA (homologs of which are also found in E.coli) is associated which IscS, another NifS homolog and IscU, a nifU homolog as well as other factors consistent with a role in FeS cluster chemistry. A homolog from Geobacter contains a selenocysteine in place of an otherwise invariant cysteine, further suggesting a role in redox chemistry. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other]
Statistics
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PSSM-Id: 272875
Aligned: 37 rows
Threshold Bit Score: 125.77
Created: 7-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1NWB_A              11 KVTDKAVEEIKKVAQENNIe----NPILRIRVVPGGCSGFQYAMGFDDTVEE--GDHVFEYDGVKVVIDPFSMPYVNGAE 84  Aquifex a...
AAC35199             4 NLTDKAAFRLRTFIRGEGSk----VTGIRVGVKDGGCNGYEYTLNLVKEPNS--EDLRFEQNNVPIYVDVHSASLLEGVV 77  Cyanothec...
Q47887               9 ELTDKAVAQVRHLLGSTPGh---rGLRLRIGVDPGGCSGYTYKLALVPGAET--GDVVLPQDGFDVVVHTTGVDLLRGMR 83  Frankia alni
AAD17270             9 ELTERARAQVRTLLGGSAEt---aGYGLRVGVNPGGCSGLTYNLALAPGAES--DDIVIHSDGFDVFVNSSMMGHLRGLR 83  Frankia s...
P37026              10 EFTDAAANKVKSLIADEDNp----NLKLRVYITGGGCSGFQYGFTFDDQVNE--GDMTIEKQGVGLVVDPMSLQYLVGGS 83  Escherich...
Q9ZE83               4 TITDRAFERIYELIELEKDk----NLVLRVSVDSGGCSGLMYNYELVSKDNIekDDYVFTRHNATIIIDSISQKFMLNCT 79  Rickettsi...
CAA17797            99 YVKDSAKKQLEKIAERKPEe----NSVLRVTVDGGGCHGYQVSFRMDNKIGn--ADTVFVRGKARVVADNISLPLISGSE 172 fission y...
FlyBase:CG13623-PA  36 QVSESCLKRLREICVDG--------SFLRVTVEGGGCSGFQYKFDLDKQLNe--DDRQFGEAEAKVVIDTVSLEYCSGAT 105 fruit fly
CAA33559             4 TLTEKAEFRLRAFLRGSAKdanetTKGIRVSVKDGGCSGYEYLMDVTSQPQP--DDLVTQQGSVLVYVDAKSAPLLEGIV 81  Nostoc sp...
AHW75135            59 IFTDSCCAKVADLIAEENNp----DLKLRVFVNGGGCSGFQYGFTFDEIKND--DDFEIEKNGLVFLVDPMSYQYLVGAE 132 Neisseria...
1NWB_A              85 LDYVVDFMGGGFTIR-NPNATGSCGCGSSFS 114 Aquifex aeolicus
AAC35199            78 IDFVESLTQSGFTFT-NPNASDTCGCGKSFS 107 Cyanothece sp. PCC 8801
Q47887              84 VDYTETLTSSGFTFA-NPNAKSSCGCGSSFG 113 Frankia alni
AAD17270            84 IDYVESLTSSGFTFT-NPNATSSCGCGNSFG 113 Frankia sp. EuIK1
P37026              84 VDYTEGLEGSRFIVT-NPNAKSTCGCGSSFS 113 Escherichia coli
Q9ZE83              80 LDFIEELGSSYFNVS-NPQAKAKCGCGNSFS 109 Rickettsia prowazekii str. Madrid E
CAA17797           173 IEYTNELIGSSFQLLnNPRAKTSCGCNVSFD 203 fission yeast
FlyBase:CG13623-PA 106 VDYHSELIRAGFRMVaNPLAEQGCSCGSSFS 136 fruit fly
CAA33559            82 IDFVEGLVESGFKFT-NPNATSTCGCGKSFK 111 Nostoc sp. PCC 7120
AHW75135           133 IDYTESLQGSQFVIR-NPNAETTCGCGSSFS 162 Neisseria meningitidis
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