Conserved Protein Domain Family
SNARE_GS27

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cd15863: SNARE_GS27 
SNARE motif of GS27
GS27 (also known as Bos1, EPM6, golgi SNAP receptor complex member 2 or GOSR2) is a member of the Qb subfamily of SNARE (soluble N-ethylmaleimide-sensitive factor attachment protein receptor) proteins. GS27 forms a complex together with Bet1 (Qc), syntaxin-5 (Qa) and Sec22B (R-SNARE). This complex regulates the early secretory pathway of eukaryotic cells at the level of the transport from endoplasmic reticulum (ER) to the ER-Golgi intermediate compartment (ERGIC). SNARE (soluble N-ethylmaleimide-sensitive factor attachment protein receptor) proteins, which consist of coiled-coil helices (called SNARE motifs) that mediate the interactions between SNARE proteins, and a transmembrane domain. The SNARE complex mediates membrane fusion, important for trafficking of newly synthesized proteins, recycling of pre-existing proteins and organelle formation. SNARE proteins are classified into four groups, Qa-, Qb-, Qc- and R-SNAREs, depending on whether the residue in the hydrophilic center layer of the four-helical bundle is a glutamine (Q) or arginine (R). Qa-, as well as Qb- and Qc-SNAREs, are localized to target organelle membranes, while R-SNARE is localized to vesicle membranes. They form unique complexes consisting of one member of each subgroup, that mediate fusion between a specific type of vesicles and their target organelle.
Statistics
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PSSM-Id: 277216
Aligned: 48 rows
Threshold Bit Score: 76.0277
Created: 18-Nov-2013
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
heterotetramerzero layer
Feature 1:heterotetramer interface [polypeptide binding site]
Evidence:
  • Comment:based on homology to other members of the family

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1          ### ###### ##  ## ###### ## ### ###### ## ### ## ### ## #    
O14653    120 MDESLQFNSSLQKVHNGMDDLILDGHNILDGLRTQRLTLKGTQKKILDIANMLGLSNTVMRLIEKR 185 human
CAA97636  152 YQGLQKEQSVFERGNAQLDYILEMGQQSFENIVEQNKILSKVQDRMSNGLRTLGVSEQTITSINKR 217 baker's yeast
CDO75770  150 EHHALREHSFIQNTDSRLDDFIAQGRAVLDDLVDQRNVLKGTQRRLLDAANTLGLSRDVIGWIERR 215 Trametes cinnabarina
CEG80778   68 DEFALREQAFVNNTDSQLDDFIEQAQNLLENLTDQHNILKKTQKKVLDVANYLGLSQNVIRYIERR 133 Rhizopus microsporus
EAA30155  172 EQHALREQDFFRSTHSALDDYIARGQAVLGDLNQQREIMKNTQRKLYSVGNTLGISGDTIRMIERR 237 Neurospora crassa OR74A
CDK26213  172 QEGLLKEGSVLGRGNQQLDEILEMGRATFEDLVSQNEIIAKAQRKMTESLSTLGFSRATIRKIEKK 237 Kuraishia capsulata CBS 1993
KEI40978  176 IGAALDENSFYNNAGSALDDYIAQGQAILGNLGNQRDMMKGTQRRLLSAANTLGLSRSTISFIERR 241 Mixia osmundae IAM 14324
KFH65133  130 QAHAYRERDFAQRTGMQLDDMLHQGKAALDDLFQQRNKLKSTQRKILDAANTLGLSRNVIQYIERR 195 Mortierella verticillata NRRL 6337
Q9P7G5    143 QDGLLKEHDFLGRAESQVDEFLERGRMILGDLVEQGSVLKATKTKVLNAANTLGITRHTLSLINRR 208 Schizosaccharomyces pombe 972h-
CCG84702  133 QQGNLNEASALNRMGNTLDEYIESGLASLGDLRDQSTALKGTQKRLRDIAVGLGLSGDTIRLIERR 198 Taphrina deformans PYCC 5710

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