Conserved Protein Domain Family
RWD_ScGIR2-like

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cd23824: RWD_ScGIR2-like 
RWD domain of Saccharomyces cerevisiae genetically interacts with ribosomal genes protein 2 (GIR2) and related proteins
GIR2, also called DRG family-regulatory protein 2, acts as a negative regulator of GCN2 kinase activity by interacting with GCN1 and disrupting the GCN1-GCN2 interaction in amino acid-starved cells. It also interacts with RBG1. The RBG1-GIR2 complex is responsible for efficient cell growth under conditions of amino acid depletion and binds the activator GCN1. Critical mutations in the RWD domain of GIR2 abolishes its interaction with GCN1. GIR2 may interact with ribosomes through GCN1, which binds directly to ribosomes.
Statistics
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PSSM-Id: 467660
Aligned: 16 rows
Threshold Bit Score: 167.497
Created: 14-Aug-2017
Updated: 27-Apr-2023
Structure
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Aligned Rows:
 
putative Gcn1
Feature 1:putative Gcn1 interface [polypeptide binding site]
Evidence:
  • Comment:upon induction of starvation the Rbg2-Gir2 protein complex is stabilized and efficiently binds Gcn1 protein, critical Glu and Tyr mutations in the RWD domain of Gir2 abolishes its interaction with Gcn1

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1               #                                                            #           
Q03768         3 YKEEQKQELEVLESIYPDELRIINdeYPKIKFEVAIKLELdtgd----stsvLTKEHTIIAEFKLPENYPDEPCLISLEA 78  Saccharomyces c...
Q6CQJ5         3 YKEEQTQELEILESIYPDEFTVLNseYPEIELQIDIKLDPvplddssytvdsITNDHILHTIFTLPENYPDEAPLIKIMP 82  Kluyveromyces l...
Q750B2         3 YQEEQKQELEVLESIYADDLTVVCgeYPKIQFEVDLKLDLiplasssftaaaISKEQHLVVDITLPERYPEEAPQLSIRP 82  Eremothecium go...
CCF56875       3 YKEEQTQEIEVLESIYPDELEILNanYPNIQFKIDLNLELnei------spsLTKQHSLEITFTLPETYPDEPPLISIDS 76  Kazachstania af...
CCH58199       3 YEEEQVQELEVLQSIYPDEFTILNetYPNIHFQIDIKLELdte-------ieLKKEHIISVDIQLPETYPDVAPILSLDP 75  Tetrapisispora ...
GAV55270       3 YQEEQNQELEVLESIYPDELEVIKrkYPDVHFRILLKLELpied-----lsiLKKEHSIEVDFHLPENYPEEAPIIALHP 77  Zygosaccharomyc...
CCE93269       3 YTGEQEQELEVLESIYPDELTVITktYPEVHFKVDVKLEPqled-----pttLNKEHTVCIDFRLPEKYPEEAPMIELEA 77  Torulaspora del...
SCU94068       3 YQEEQNQELEVLESIYPDELTVVSntFPKIEFEVRLPLDLvpldsssftadsLTKDHWVVINIKLPETYPETVPIITLSA 82  
XP_003646144   3 YKEEQEQELEVLRSIYPEEVEVLCgeYPRIRFQVDLKLEVvplerssftcdtISKEHHLVLEFQLPERYPEEAPEVKIEP 82  Eremothecium cy...
SCV04559       3 YKEEQLQELEVIESIYPDEFSCLDneYPGIKFNVRINVEPqpfpdssftadsLSNDHYLDLQFSLPENYPDVAPKLEIEC 82  Lachancea sp. P...
Feature 1                                                                                        
Q03768        79 QEvalndn-----eedneEDEDEVEYDDHGNKVLKKFENlpDLISFKGYLPELTVQLESQIEtDMLLGMQMCFALISSIK 153 Saccharomyces c...
Q6CQJ5        83 EEvpkfdrddedvddeddEDKDEIEYDDHGNPIVSKFENipDKIHFDEFIPQCIEKLNEQIQeDMLLGMQMCFALISNIK 162 Kluyveromyces l...
Q750B2        83 WDvrgg--------deagEEDEEQEYDEHGNPVVAKLENipDSISFDGEVDGFASQAMRQVEeDMLLGIQMCFALISSIK 154 Eremothecium go...
CCF56875      77 FEeslvde----ssdeedEDDDGIEFDDHGNKILKNNVNlpDAISFNEYIPDLETKLLNAIDeDMLLGMQMCFTVISNAK 152 Kazachstania af...
CCH58199      76 QEislkee----esdsesEDEDEVEFDEHGNIVISKVQDfgSKIHFKDHVNELLVTIEEQIEtDMLIGMQMCFALISTIK 151 Tetrapisispora ...
GAV55270      78 IEtplagy-----eesksKEEEEQAYDDHGNKIVSRLHDnaNSIHFDSYIPELQVQIEEHIKdDMLLGMQMCFALLTSIK 152 Zygosaccharomyc...
CCE93269      78 IEegqq--------eeddGDEEEPEFDEHGNRVSSKFQSlpDQINFDSYLPELQVLLEEQIEnDMLLGMQMCFTLISSVK 149 Torulaspora del...
SCU94068      83 EHerkaglksdgddanqdESDKEIEYDDHGNPLEAKLENlpDQVAFEDHLNVLESQVESQAEeDMLVGMQMCFALVSWLK 162 
XP_003646144  83 YVvsmegg----geegegEEEEEQEYDDHGNLIVGKVENipDLITFNEYVPKLMLDVHRQVEeDMLLGMQMCFALISSIK 158 Eremothecium cy...
SCV04559      83 IEesrkdd-----ddeedEDEEEIEYDENGNPIEAKLTNlpDQIHFQGYALRLTSQVEQQAEdEMLIGMQMCFAFVAWIK 157 Lachancea sp. P...
Feature 1               
Q03768       154 ERCEQWY 160 Saccharomyces cerevisiae S288c
Q6CQJ5       163 DYAEQWF 169 Kluyveromyces lactis
Q750B2       155 EDAESWF 161 Eremothecium gossypii
CCF56875     153 EFSETWF 159 Kazachstania africana CBS 2517
CCH58199     152 ENCEQWF 158 Tetrapisispora blattae CBS 6284
GAV55270     153 DHCESWF 159 Zygosaccharomyces rouxii
CCE93269     150 DLCETWF 156 Torulaspora delbrueckii
SCU94068     163 EACERYF 169 
XP_003646144 159 ELSEDWF 165 Eremothecium cymbalariae DBVPG#7215
SCV04559     158 ESCETWF 164 Lachancea sp. PJ-2012b

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