1IRU


Conserved Protein Domain Family
proteasome_beta_type_1

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cd03757: proteasome_beta_type_1 
Click on image for an interactive view with Cn3D
proteasome beta type-1 subunit. The 20S proteasome, multisubunit proteolytic complex, is the central enzyme of nonlysosomal protein degradation in both the cytosol and nucleus. It is composed of 28 subunits arranged as four homoheptameric rings that stack on top of one another forming an elongated alpha-beta-beta-alpha cylinder with a central cavity. The proteasome alpha and beta subunits are members of the N-terminal nucleophile (Ntn)-hydrolase superfamily. Their N-terminal threonine residues are exposed as a nucleophile in peptide bond hydrolysis. Mammals have 7 alpha and 7 beta proteasome subunits while archaea have one of each.
Statistics
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PSSM-Id: 239726
Aligned: 21 rows
Threshold Bit Score: 301.1
Created: 26-Apr-2006
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
active sitebeta subunit
Conserved site includes 8 residues -Click on image for an interactive view with Cn3D
Feature 1:active site [active site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1             #               # #              #                                      
1IRU_1      2 FSPYVFNGGTILAIAGEDFAIVASDTRLSEGF-SIHTRDSPKCYKLTdKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNn 80  cattle
O64464      6 DWVYENNGGTCVAIAGADYCVVAADTRLSVGY-NILTRDHSKICELAdKCALASSGFQGDIKALHKNLAARELLYQHQHn 84  rice
AAF05905   45 WSPYTDNGGTIAAIAGSNYVVLGADTRLNGDFcIHTRSDTSKLFKLTdRIFLASSGMQADRLQLQQMLKYRIQWYQYNNg 124 Trypanosoma brucei...
NP_703527  30 WYPYIDNGGTVIGLTGKDYVILAADTRLSLSY-SIYTRFCPKISKLTdKCIIGSSGMQSDIKTLHSLLQVKQRYKSGINk 108 Plasmodium falcipa...
AAO52127   23 FEAYVDNGGTVLAVAGKDYCVIAGDTRMSDGGyGIQTRKYTKIFQLTkKCVLATSGMQADTIALQKRLKSMLESFEKEHg 102 Dictyostelium disc...
NP_586070  83 FDPYEDNSGTTICLKQGDFIVVAGDTRHSSSM-VINSREMSKIFQVG-DFLLTGTGFYADTHEVYVKMVYEIRQYEVDDs 160 Encephalitozoon cu...
NP_191641   8 WSPYDNNGGTCVAIAGSDYCVIAADTRMSTGY-SILSRDYSKIHKLAdRAVLSSSGFQADVKALQKVLKSRHLIYQHQHn 86  thale cress
XP_763950   8 FNPYVNNGGTVIAATWNNYAVIAADTRLSQRY-LIHTRFSTKLFKLTdKCILGTSGMQADMLALQSVLERQIELYRYTHn 86  Theileria parva st...
XP_653346  21 WSPYEDNCGTCVVIKGEDFVVIASDTRMSRDY-MILTRNDSKIYPLTsKCVFTGSGMRADIKELTDQIKAHIKNYKYENg 99  Entamoeba histolyt...
XP_769691  48 FDPYIDNGGTIIAIAGPDFAMIAGDTRLSEGY-NILSRNVRKVFPVTdKIVYAASGMHADVQRLLKHMKIESTEYYLKTq 126 Giardia lamblia AT...
Feature 1                                                                                    #
1IRU_1     81 k--------------------amTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDeEGKGAVYSFDPVGSYQRDSFKAGGS 140 cattle
O64464     85 k--------------------rmSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDsEGKGCVFTYDAVGSYERTGYSAQGT 144 rice
AAF05905  125 gk-------------------vpSTKAIAKLTSTMLYQRRFFPYYTFNMIVGIDeKGAGVCYSYDPVGSTEPFRYGTCGS 185 Trypanosoma brucei...
NP_703527 109 liyiyiyickkiqlfvlehshypDIHVIARLLCVILYSRRFFPYYAFNILAGVDeNNKGVLYNYDSVGSYCEATHSCVGS 188 Plasmodium falcipa...
AAO52127  103 k--------------------pmSTPAIAQFLSNTLYYKRFFPYYTFNLVAGVDeQGEGWIWTYDAVGSHERVKYSSQGS 162 Dictyostelium disc...
NP_586070 161 ----------------------iNIHSAANLLSKILYSKRFFPYYSFCVLSGFE-KGKPYVYSYDPIGSFGSVTCVCSGS 217 Encephalitozoon cu...
NP_191641  87 k--------------------qmSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLDeEGKGCVFTYDAVGSYERVGYGAQGS 146 thale cress
XP_763950  87 r--------------------epTFNAIAQLLSTVLYGRRFFPYYTFNILCGIDeQGKGVVCGYDAVGNYNYEKYTAQGT 146 Theileria parva st...
XP_653346 100 k--------------------emSTESVAQVLSNTLYSHRFFPYYSFSLLAGINsKGKAVTYNYDAVGSFEERKYSCSGS 159 Entamoeba histolyt...
XP_769691 127 k--------------------eiAIEQFIRLLSAMMYYRRSFPWYTSSIVAGIDsEGRGAVYSYDVIGSTLRTRYGSAGT 186 Giardia lamblia AT...
Feature 1                                                      #  ##                       
1IRU_1    141 ASAMLQPLLDNQVGFknmqn----vehvPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGIREETVSLRKD 213 cattle
O64464    145 GSALIMPVLDNQLKSpsplllpardavtPLSETEAVDLVKDVFASATERDIYTGDKLEIVVINKAGTKREYIDLRKD 221 rice
AAF05905  186 ASSFVEPLLDCLLTRqhmvt----qapaDLTMEEALGMLKNAFTGAAERDIFTGDTVCFHIITADGVGTEMFELRKD 258 Trypanosoma brucei br...
NP_703527 189 GSQLILPILDNRVEQknql-----ikntNFNLGDDINFVKDAITSATERDIYTGDKTLIYVIDKMGINVNTLDLKQD 260 Plasmodium falciparum...
AAO52127  163 GNQLVIPLLDNQVAKfnqqi---vegnkDVSCEQVVSFVKDSITSAGERDIYTGDFADIVVVDKNGVHWEKFELKLD 236 Dictyostelium discoideum
NP_586070 218 GRSMIQPLLDSFIDKknwnn----aeetQLSQEDCIRLVVKAFNSAAERDVKTKDNLEVCVMRENQVMRETFPLRRD 290 Encephalitozoon cunic...
NP_191641 147 GSTLIMPFLDNQLKSpsplllpkqdsntPLSEAEAVDLVKTVFASATERDIYTGDKLEIMILKADGIKTELMDLRKD 223 thale cress
XP_763950 147 SSSLVISVLDNLLNGnnqk-----vkpeVNSLEDLVNLVKNAMVSAVERDICTGDSAELVICDGVVMEPVHMDLRID 218 Theileria parva strai...
XP_653346 160 GEELAYPLLDSLLKDrt----------ePLGEQEAINIARDVMTSACERDIHTGDNVEIVILNSNGIRKEVHFMASD 226 Entamoeba histolytica...
XP_769691 187 GNAMICPILDEAILSkn---------eaEITREFAFELIQSAFRSCAERDIYTGDSVVAMCISADGIQERTFELRKD 254 Giardia lamblia ATCC ...

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