6SHU


Conserved Protein Domain Family
Med

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COG1744: Med 
Lipoprotein Med, regulator of KinD/Spo0A, PBP1-ABC superfamily, includes NupN [Signal transduction mechanisms]
Statistics
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PSSM-Id: 441350
Aligned: 862 rows
Threshold Bit Score: 82.1105
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6SHU_A        43 GkSEAKTVSLIVDGAFDDKGFNESSSKAIRKLKADL-NINI-IEKASTGNS-YLGDIANLEDGNSNLIWGIGFRL----S 115
WP_013255239  39 DaPAQVKVAMLMSGPINDGGWNTSAYEGLTRLRDEL-GFEI-AYTEMVPQSqQKSILRNYAQRGYDLVIGHGFEF----G 112
WP_015173201  33 PtNTGLKVALITSGAANDQSWSEAGIGGLKLIEERY-QAQT-SYQASVSNEaAEAVLRQYAKDGYDFIIAQSGGY----V 106
WP_126422190  45 EaKDSYKVALVISGPALDGGWGQGHYESLQKACEENsKWEMlEPKENTASAdAATAAQSYVDQDVDLIIAAGNEFcsdwA 124
WP_013253650  27 EsSDQLKVAALLPGPINDGGWNTNMYDSLKFMEKEL-GAKI-AYTERTPASdYEEIFRGYAASGYNIVFGHGFEF----G 100
WP_069178349  44 AsDKVWKVAMIANTPIADGGWNSACYAGMTGAAENF-GFET-AYSENVAQTdYVSILTEYGNMGFDLVFAPGNEF----T 117
WP_015176304  67 StSSTFKVALVVTGSKDNNSWSQACFEGLNLIKDKF-NAQV-DF-TGLDGEdSEAALRKYAQSGYDLVIAASGGY----I 139
WP_111525836  39 QkSGKYKVAFILNCSINDGGWGTACYSELVSACEKNsDWTM-EYTDNLSQDgYYDAMVAYCNAGFNLIYAPGGEY----T 113
WP_069178679  48 TdHSQYKVALVLPGTINDEGWNATAFQGLELIK-QA-GFET-AYSENVKTSdYEAVYRGYAGKGYDLIIGHGFEF----L 120
WP_126422192  48 SgDKKYKVAMIMSGITTDGGWDQGHYESLKRAIDEHpNWEMlEPKENTADAdAATAAQTYVDQDVDLIIGNGNQFasdwA 127
6SHU_A       116 DILFQRASENVSVNYAIIEGV--Y-Dei-qiPKNLLNISFRSEEVAFLAGYFASKASKTGKIGFVGGVRGKVLESFMYGY 191
WP_013255239 113 DSIMEVAPEFPDVKFYQVGGE--V-Qa-----DNVGSGVFGLGELSYLAGKLSAKFTKTNKIGFIGAMEIPTTLAEIDML 184
WP_015173201 107 AAAEKVAAEFPRTKFAVVNTY--PgNn-----SNLGAVAFRSGEVGYLTGYLAAMKSQSKKVGYIVGDRYPMYVEEEALF 179
WP_126422190 125 EVVAEAAESHPNVHFLMTNTDptTdLadyetLDNLETVQVNLKQAGSLAGVVAGLMTKSNCIGFVGGMRIPTTLTKYSAY 204
WP_013253650 101 EPAEKVAKEFPDVTFIITSTS--IsQp-----PNLGSFLVDDFQCGFVQGAVAAILSKSGIVGYVGGMEIPPIVNQSKGF 173
WP_069178349 118 DAVLEVAPAFPKTNFLVLNGD--V-Ka-----ENVMSVKADNTQMGFLAGALAGLKTRTKKVGFVGGMEITTAKQAINGY 189
WP_015176304 140 KAAEKVAREFPRTKFALITTY--PgNn-----RNLGAVAFRSGEVGYLTGALAAMKTKSNKVGYIVGASYPVYKEEEALF 212
WP_111525836 114 DAVLQVANEYPDIAFAILNGD--TdVpekatNKNVTSLLPNAQQIGWIAGALAGLMSETGNIAFIGGMELTTTVAKYKGY 191
WP_069178679 121 DPAKAVAADFPKTMFAVTSTI--EyEa-----PNVFAMDTNSSDAGFLAGVLAAKMTKTKVVAVPCGLEIPGIIRYATGF 193
WP_126422192 128 EVVASAADEHPNVNFLITNTDpeAeMgdyenLDHVETVLPDFVQTGALAGVVAGLMTQTKSIGFIGGMKLPSTTKKYAAY 207
6SHU_A       192 EAGAKYA----NSNIKVVSQ-YVGTFGDFGLGRSTASNMY-RDG-VDIIFAAAGLSGIgvIEAAKE----L---GpdHYI 257
WP_013255239 185 RETIAEV----NPKASFTVA-YTGSWTDVNKGKEAALAQI-ANG-VDVIVAIGDACDVgaIQAAKE----R---G--AYV 248
WP_015173201 180 RRGAKAQ----NPEIEVSSV-FLGSWTNGLKCTEVAQEMV-SKG-VDVLALNADAAGAtaMQAIAQ----Ky-pE--VRF 245
WP_126422190 205 LAAAQKV----NSAVKGVYN-FEAGFSDASAGVKLTESWIgTDN-VDVMWCDASAVDGgvRQALES----AgadT--HFN 272
WP_013253650 174 VAGAKYV----DKSIDAKAL-LTGSFEDIAKAKEMSKSLI-AEG-ADILVADADESNHgvIEAVEE----A---G--ALV 237
WP_069178349 190 YQGVAYT----NPEAEVSVS-WANSWDDTAKGKEIAMSMI-STNdTDVFFGTASAVDVgvREGLVEf---E---D--RWG 255
WP_015176304 213 RRGVKAT----NPSVQASTA-FLNSWIDTDKATKVATDMV-ASG-VDVLTINADEAGLaaLKAVTQ----Kp--G--VFV 277
WP_111525836 192 AEAAKYVaekdGKSINVLDAvYANSFDDSSKGIEFANAMM-EQN-ADVFFGDASAVDSgaRQAIDEhnsaKgkvE--VYD 267
WP_069178679 194 RQGVEYI----DPEIKVLSS-YTGSSSDTAQLKELTAAMV-QQG-ADIIAPNADQAGIgaFEYVKE----Hk--D--LRI 258
WP_126422192 208 LAAAQKI----DASITGQYN-FEAGFTDASLGTKLAEQWIaSNN-VDVMWGDASAVDNgvRQALQN----AgadT--HFD 275
6SHU_A       258 IGVDQDQSYLA-P---NNVIVSAVKKVDSLMYSLTKKYLEtGVLDGGKTmFLGLKEDGLGLVLnenLKSNYS-EIYNKSL 332
WP_013255239 249 IGWSGDFNSLA-P---DIVLTSMVQSVPDMILMQGKMLKE-GNWKGMSKv-WGIADGVEYPGT---WSKVVPaELKDEVM 319
WP_015173201 246 IGWTQDQHAIA-P---GKVITSVLQDIPALVFNAATLMQQ-GRWEGKLYk-FGLKEQIYSFAP---LRG-LTpEEEAAFN 315
WP_126422190 273 IAQPIDLCGSDhP----CVVTSTVTDW--KMGEAMSAIED-GSFGSGKViEANIENGGVSLGK---YSDAVSqDVQDKVA 342
WP_013253650 238 IGSSGDIYETV-PdarDVILTSMTENMPKGLTVLAKSVAD-GTFEAKNYi-IGLHDGAVALAPfrdKASLVSaDQQAQID 314
WP_069178349 256 IAQPGESLDQN-P---ERILTSIITDNVALVGIGLERTQA-GTFGGEVIe-AGVKEGVLYVGK---IGESMk-DVEEAFM 325
WP_015176304 278 IGWAKDQYELA-P---GKVLTSVLQDIPNLVLNVAVLTQQ-GRWEGKLYk-FGLKEKIYDFAP---FRGTLTsQEEETFK 348
WP_111525836 268 IGQPADILGQN-----ECVIGSQITDNSSLIELSFKAIEE-GKFGGEVLy-GDLQNGVLSVGK---LSDLVPaEKQSLYN 337
WP_069178679 259 IGVYGDQKALA-P---DQTLTSAIIDLPGAIEQVAELGFE-GRLEAKAYv-FGVKEGSVWLTD---FSSDVPqDVQDLLM 329
WP_126422192 276 IAQPIDAVGDDqP----TVITSTITDW--MIGQAMDEIES-GKFGGGVAiTGNMDNGGITLGK---FSDKVSqDVQDKIA 345
6SHU_A       333 KIGQSIMNGIIKVP 346
WP_013255239 320 ADFEAMKAGTLHKR 333
WP_015173201 316 QVKEQVIVGEIDVA 329
WP_126422190 343 EYTEQIKADTFLTD 356
WP_013253650 315 KIIQDLKDGTIDLN 328
WP_069178349 326 KIFDELKAGSITID 339
WP_015176304 349 TIREAVTTGKIDVS 362
WP_111525836 338 EYIEQMKADKFMK- 350
WP_069178679 330 DVIGKIKNGEIEVK 343
WP_126422192 346 EYSDQIKAGSFISD 359
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