Conserved Protein Domain Family
7tmC_RAIG1_4_GPRC5A_D

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cd15279: 7tmC_RAIG1_4_GPRC5A_D 
retinoic acid-inducible orphan G-protein-coupled receptors 1 and 4; class C family of seven-transmembrane G protein-coupled receptors, group 5, member A and D
Retinoic acid-inducible G-protein-coupled receptors (RAIGs), also referred to as GPCR class C group 5, are a group consisting of four orphan receptors RAIG1 (GPRC5A), RAIG2 (GPRC5B), RAIG3 (GPRC5C), and RAIG4 (GPRC5D). Unlike other members of the class C GPCRs which contain a large N-terminal extracellular domain, RAIGs have a shorter N-terminus. Thus, it is unlikely that RAIGs bind an agonist at its N-terminus domain. Instead, the agonists may bind to the seven-transmembrane domain of these receptors. In addition, RAIG2 and RAIG3 contain a cleavable signal peptide whereas RAIG1 and RAIG4 do not. Although their expression is induced by retinoic acid (vitamin A analog), their biological function is not clearly understood. To date, no ligand is known for the members of RAIG family. Three receptor types (RAIG1-3) are found in vertebrates, while RAIG4 is only present in mammals. They show distinct tissue distribution with RAIG1 being primarily expressed in the lung, RAIG2 in the brain and placenta, RAIG3 in the brain, kidney and liver, and RAIG4 in the skin. RAIG1 is evolutionarily conserved from mammals to fish. RAIG1 has been to shown to act as a tumor suppressor in non-small cell lung carcinoma as well as oral squamous cell carcinoma, but it could also act as an oncogene in breast cancer, colorectal cancer, and pancreatic cancer. Studies have shown that overexpression of RAIG1 decreases intracellular cAMP levels. Moreover, knocking out RAIG1 induces the activation of the NF-kB and STAT3 signaling pathways leading to cell proliferation and resistance to apoptosis. The specific function of RAIG4 is unknown; however, this protein may play a role in mediating the effects of retinoic acid on embryogenesis, differentiation, and tumorigenesis through interaction with a G-protein signaling cascade.
Statistics
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PSSM-Id: 320406
Aligned: 5 rows
Threshold Bit Score: 358.695
Created: 2-Feb-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
  next features
Feature 1:putative allosteric modulator binding site [chemical binding site]
Evidence:
  • Comment:based on the binding of human mGluR1 receptor to a negative allosteric modulator FITM (contacts at 4A)

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                #           ##  ##  #
Q8NFJ5     26 AWGIVLETVATAGVVTSVAFMLTLPILVCKVQDsNRRKMLPTQFLFLLGVLGIFGLTFAFIIgldGSTGPTRFFLFGILF 105 human
Q8BHL4     28 GWGIALETLAAVGAVATVACMFALVFLICKVQDsNKRKMLPAQFLFLLGVLGVFGLTFAFIIkldGATGPTRFFLFGVLF 107 house mouse
EMC86801   27 AWGIVLESLAAAGVLVTIFLICSLFSLICKVQDnNKRHMISIYFFFLLGTLGIFGLTFAFIIklnSRTRPTRFFLFGVIF 106 domestic pigeon
Q6PA25     18 AWGIVLETLAAAGIVFSIILILALLIMMPRISDpAKRAVSPVQLIFLIGTFGIFGLTFAFIVeltEQTCPTRFFLFGVLF 97  African clawed frog
Q9NZD1     21 PWGIILESLAILGIVVTILLLLAFLFLMRKIQDcSQWNVLPTQLLFLLSVLGLFGLAFAFIIelnQQTAPVRYFLFGVLF 100 human
Feature 1                                                                          #    #  ## 
Q8NFJ5    106 SICFSCLLAHAVSLTKLVRGrkplsllvILGLAVGFSLVQDVIAIEYIVLTMnrtnvn---vfselsAPRRNEDFVLLLT 182 human
Q8BHL4    108 AICFSCLLAHAFNLIKLVRGrkplswlvILSLAVGFSLVQDVIAIEYLVLTMnrtnvn---vfselpAPRRNEDFVMLLI 184 house mouse
EMC86801  107 ALCFSCLLTHAFNLNKLVRGrkpfswliLLLLIVSFALVQVVISIEYLVTMLvnqrdd----flsmtAEETNKDFVMLLI 182 domestic pigeon
Q6PA25     98 AICFSCLLAHASKLVRLVRGghgicwwmMLLMALFLPLVQVVIAILYIVLGLvrsgtpctvfngatnYHQLNQDFVLILI 177 African clawed frog
Q9NZD1    101 ALCFSCLLAHASNLVKLVRGcvsfswttILCIAIGCSLLQIIIATEYVTLIMtrgmm-----fvnmtPCQLNVDFVVLLV 175 human
Feature 1      #                                   #  ##  #   #              ##  #  #   #     
Q8NFJ5    183 YVLFLMALTFLMSSFTFCGSFtgWKRHGAHIYLTMLLSIAIWVAWITLLMlpd-----fdRRWDDTILSSALAANGWVFL 257 human
Q8BHL4    185 YVLVLMVLTFFTSFLVFCGSFsgWKRHGFHICFTSFLSIAIWVAWIVLLLipd-----idRKWDDTILSTALVANGWVFL 259 house mouse
EMC86801  183 YVLFLMALTFLVSMFTFCGSYkrWKRHGAHIFVTILFSVAIWVVWITMLTkgnt--vlnnPSWDDPVVAIALVSNGWIFL 260 domestic pigeon
Q6PA25    178 YVFLLMAITFLVSLISLCGPCkyWKRHGAHIYVTMFFSIGIWVAWICMLLrgnadlnqgnRTWDDPVLSIALVANGWVFL 257 African clawed frog
Q9NZD1    176 YVLFLMALTFFVSKATFCGPCenWKQHGRLIFITVLFSIIIWVVWISMLLrgnpq-fqrqPQWDDPVVCIALVTNAWVFL 254 human
Feature 1                  
Q8NFJ5    258 LAYVSPEFWLLTK 270 human
Q8BHL4    260 AFYILPEFRQLPR 272 house mouse
EMC86801  261 IMYIIPEICFLTA 273 domestic pigeon
Q6PA25    258 MMYMVPELCLMTR 270 African clawed frog
Q9NZD1    255 LLYIVPELCILYR 267 human

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