7P2P


Conserved Protein Domain Family
SPC25

?
pfam06703: SPC25 
Microsomal signal peptidase 25 kDa subunit (SPC25)
This family consists of several microsomal signal peptidase 25 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 25 kDa subunit (SPC25).
Statistics
?
PSSM-Id: 461993
Aligned: 155 rows
Threshold Bit Score: 66.8312
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
7P2P_C           61 DDSAKKVLLEKy--kYVENFGLIDGRLTICTISCFFAIVALIWDYmhPFPESKPVLALCVIS-----YFVMMGILTIYTS 133
2_pfamImport      7 DDTIVEFFQGKd--tFKLHYGWDNAKLLFMLLATIIAAVSHFFKHp-AIPEH-VLIYSCVGA-----FFFIHALLFGYTT 77 
jgi:OSTLU_92692  19 DDATVCAVLDAg---YDEDTRTVDAKIALSIAAIGAACAAHAVTMt-----nDATRWACAAA-----YGALACGAPCVAK 85 
XP_006652334     33 DETISDVVKSKg---YAEDTRLGNWKLAIGAAVIAIALLAQFYPK--KFPQNREFLLGCIAL-----YVVLNVVLLILSY 102
XP_015623270     30 DETVSEVAKSKg---YPEDARLSNRRLAVGAAVIAVALLAQFYPR--KFPENRDVLLACIAL-----YAALNVALQIVTY 99 
XP_006359031     29 DESVTEIVTSKg---YPEDVRLSNIRLLIGSIIIAIALVAQFYKK--EFPANRDFLIGCIVL-----YILFNVILQLIIH 98 
CBI31534         28 DEYVSEIVTSRg---YVEDVRMSNVRLLMGSIIIIIALVAQFYPK--KFPENRDFLIVCILLypfccYILFNGLLQLIIY 102
XP_002881686     29 DESVSDIVTSRg---YKEDVRLSNLKLILGTIIIVVALVAQFYNK--KFPENRDFLIGCIAL-----YVVLNAVLQLILY 98 
EFN57522         41 DEAVIEAAGEEg---HRIDNIYTDTKIVLGLLACGVACLAQFYPK--KYPDNTLLLAGCVVA-----YVVLSSLMTVVAM 110
EDQ90092         53 EEAFCKATGDAvpeeFEQATAEEDFKLIMAAIGCAFAGYACIYGLfvPHPASSQVVGICAAA-----YFVFMTILNVHAM 127
7P2P_C          134 -YKEKSIFLVA----------------HRKDPtgmdpddIWQLSSSLKRFDDKYTLKLTFISGRTKqqr--eaEFTKSIA 194
2_pfamImport     78 -FIEKDVLLRM----------------TRTGSag----kTILVRTSFPYTESHYSLSIHHGDAKDTpkkv-----elyVG 131
jgi:OSTLU_92692  86 -YAERDALLLTrargvdcdgrepaawaRNERSk-----dGLTVHVRCARLAETLEVIVSAKSDGKCeakd-avrCDVRCE 158
XP_006652334    103 -TKEKDAIMFT----------------HPPAGsfs--stGLVISSKLPRFSDMYTLTIASADPQSIsank-pvhFTKSVT 162
XP_015623270    100 -TKEKNAILFT----------------YPPAGsfn--rtGLVISSKLPRLSDMYTLTIASADPHSKssse-pvhFTKSVT 159
XP_006359031     99 -TKEKNAILFT----------------YPPEGsfn--stGLVVSSKLPRFSDMYTLTVESADPKSIsarp-kveFTKSVT 158
CBI31534        103 -TKEKNAILFT----------------HPPEGffn--stGLVVSSKLPRFSDLYTLSIASADPKSKaakd-pveFTKSVT 162
XP_002881686     99 -TKEKNAILFT----------------YPPEGsft--stGLVVSSKLPRFSDQYTLTIDSADPKSIsagk-sveLTKSVT 158
EFN57522        111 -VCEKDVIAFT----------------RAAPGgp----pALAIASRLPRFQQFYTLCVTPRGARAAsrgggaqSLSRSVG 169
EDQ90092        128 fFDQHAAVLMR----------------SQKTGq------RLSTFVHMNKYSPELTVEMILASSAGTsssq---tfdGHVG 182
7P2P_C          195 KFFDHSGTLVMDAYEPEISRLHD 217
2_pfamImport    132 RYFDKDGYFSKDAFNKDIETVLS 154
jgi:OSTLU_92692 159 EFVTEDGEFLEDEYEALIWRVLE 181
XP_006652334    163 KWFTKEGVLVEGLFWKDIERLID 185
XP_015623270    160 KWFTKDGVLVEGLFWKDVEKLID 182
XP_006359031    159 KWFAKDGVLVEGLFWKDVEALVN 181
CBI31534        163 QWFTTDGILVEGLFWKDVEGLIN 185
XP_002881686    159 QWFTKDGVLVEGLFWKDVEALIK 181
EFN57522        170 EYFHEDGQLAAGVIKKDAVELLr 192
EDQ90092        183 QFFYEDGEMCREAVVQVTEDLLS 205
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap