Conserved Protein Domain Family
P_permease

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cd01116: P_permease 
Permease P (pink-eyed dilution). Mutations in the human melanosomal P gene were responsible for classic phenotype of oculocutaneous albinism type 2 (OCA2). Although the precise function of the P protein is unknown, it was predicted to regulate the intraorganelle pH, together with the ATP-driven proton pump. It shows significant sequence similarity to the Na+/H+ antiporter NhaD from Vibrio parahaemolyticus. Both proteins belong to ArsB/NhaD superfamily of permeases that translocate sodium, arsenate, sulfate, and organic anions across biological membranes in all three kingdoms of life. A typical ArsB/NhaD permease contains 8-13 transmembrane domains.
Statistics
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PSSM-Id: 238536
Aligned: 22 rows
Threshold Bit Score: 279.137
Created: 10-Jan-2006
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
transmembrane
Feature 1:transmembrane helices
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1           ####           ##############                            ################## 
BAC96066     55 FVLSYILVMLEEylkmrksKPVLLAAGLIWILI-GFSYqshgqsevakaaLEHNLLe---yAELLLFLLVAMTYINAMEE 130 Vibrio vulnificu...
P74635       14 FVGVILLIMSEKi-----hLTIAAFLGALILVFtHVITlk--------egIDYISQs----YATLALFFGVMVLVRSFEP 76  Synechocystis sp...
BAB02474    147 FGIGYAGIIFEEslafnksGIGLLMAVSLWVVR-SIGApstei---avldLQHATAe---vSEIVFFLLGAMTIVEIVDA 219 thale cress
NP_146926     9 FTLTIMLVVSRYv-----dEVAAALAGVTALILlTNYT------------PEEAFNfv--eWNVIAILLGMWIIAGYMIE 69  Aeropyrum pernix
NP_228742    12 FIIVYLFIILEKh-----hRAVITMLGGSAALF-LVFKd----------pIEALVRyv--dFNTIFLLIGMMIFVSVTKR 73  Thermotoga maritima
NP_228851    11 AILAYYFIIFGKi-----aKSVVTLLIALVLMAiKVVEgl---------dLKNIGEvv--dFNTLGLLLGMMIIVHILKG 74  Thermotoga maritima
ZP_00007535  21 FVAAYILVVFEEathlrksKPVMLAAGLIWLLI-GLAYaiagrg-eetyeLSAHIIee--yGELFLFLLVAITYVNTLEE 96  Rhodobacter spha...
NP_692951    10 FIVSYIFIMTEKi-----nRAIIALAGGTLLILtGVYT------------IDEVFTqy-idWNTIALLFSMMVLISITEK 71  Oceanobacillus i...
NP_833197    20 FLITYGFIISEKl-----nRAVIALFGAAIMIIfGVED------------LHTAFTsh-iqWETITLLIGMMILVHITSQ 81  Bacillus cereus ...
NP_867419    27 MMATYVGVAIERf-----hKTVAALCGAAVLVIlSVALdl--------feYPTVYNflkedLNIFGVIIGTGVLVDVVGK 93  Pirellula sp. 1
Feature 1                             ################# ##################    ##################
BAC96066    131 RRLFDALQAW--MVSKGFDFrrLFWLTGFLSFFISPIADNLTTALLMCAVVMKVSGDNPKfvNLACINIVIAANAGGAFS 208 Vibrio vulnificu...
P74635       77 TKIFEYLATQmvLLAKGSGKl-LMLGVIAITTPICAVLPNATTVMLLAPLIPPLAQEIGVdfVPILILMVFVANSAGLLT 155 Synechocystis sp...
BAB02474    220 HQGFKLVTDN--ITTRKPKT--LLWVVGFVTFFLSSILDNLTSTIVMVSLIRKLVPQSEYr-KLLGGVVVIAANAGGAWT 294 thale cress
NP_146926    70 GGFTEATIRLv-SRSAGTYRk-FLLYMALLSGFISMFIDNVLVILLVGSLTIAAAKKAGGnpVLAILLVGFSANFMGTAL 147 Aeropyrum pernix
NP_228742    74 SGLFHFLGLYsvKLSGGNVFl-FFIAINTLVALLSSFLDNVTTILVFVPVTLVVCDTVDLdpVPFVISEIISSNIGGTAT 152 Thermotoga maritima
NP_228851    75 TGFFEYLAISaiKISRGRFWl-LFAFLMVLTAVTSAFLDNLITIILVSPILFLILDTMEVnpVPFFLFTIFIDNIGGMST 153 Thermotoga maritima
ZP_00007535  97 RRGFEVLRAK--LVSMGLSYrsLFLLTGALSFFLSGILDNLTTALVMGTVVMALGSHSPRfvTIGCISIVVAANAGGAFT 174 Rhodobacter spha...
NP_692951    72 TGLFTFIAIRfaQKVKGNQVa-LLIGSGILTAIGSAFLDNVTTVLIFVPIMIQITKLLKLplFPYLLMIIFSSNIGGSAT 150 Oceanobacillus i...
NP_833197    82 SGVFEFVAIKaaKAAGGKPIr-ILLLLSLLTAVGSAFLDNVTTVLLIVPVTLSITRILKVnpVPYLISEVLFSNIGGTAT 160 Bacillus cereus ...
NP_867419    94 SGLFHFISMWivRLTGGQANr-LFMTLCVVTFLFVSVLTIVPAMLILSSLVLVICRSLGYkpMPLLLSVAVCANSGAIAT 172 Pirellula sp. 1
Feature 1       ######                       ###############                                    
BAC96066    209 PFGDITTLMVWQ-AGHVNFSQFMp-lFLPSAINYLLPALIMSFFIPEerpqtvhvdv-------------elkrgarriV 273 Vibrio vulnificu...
P74635      156 LVGDPATFIVGD-AINISFNDYLf-kLSFMGVLAIVSIVVITPFLFRhiwrsrfthle----------dlphpqinhpkV 223 Synechocystis sp...
BAB02474    295 PIGDVTTTMLWIhGQISTLPTMKd-lFLPSVVSLAVPLALMSLTSEVngkeqdpkdvla---------sekmaprgklvF 364 thale cress
NP_146926   148 LMGDLPPQLLHT-IAGAEFLDFIwtrGKPSSFPLLTATFLLTLGVFYilfirrepnsrid------daglsgestnrggL 220 Aeropyrum pernix
NP_228742   153 MIGDPPNIMIAS-AAKLHFLDFVv-nVAPAAVLTLIVTLIFLSAVYRrvifrkipvevvk-------dfdprraivdkkL 223 Thermotoga maritima
NP_228851   154 LIGSPLNIVLGS-ISGLSFNDFLk-nMGLVTVLMFVVVFFLFKRYVRidekafeklrnll-------svdpkrsitdpvV 224 Thermotoga maritima
ZP_00007535 175 PFGDITTLMVWQ-KGRLDFFEFFa-iLIPSLVNWAVPAAILFFAVPKgtpdaqaeti-------------rakpgalgvA 239 Rhodobacter spha...
NP_692951   151 LIGDPPNIMIGQaVDHFTFLSFLq-hTAPVAIIMFVIQLVLLLVLFRkplknarpeveki------vkldakekllispL 223 Oceanobacillus i...
NP_833197   161 LIGDPPNIMIGSaNKHLDFNAFLl-nLAPIVIIISIVTLGIIYFMYRnklkttpeqiekl------malnekdyikdqsL 233 Bacillus cereus ...
NP_867419   173 FASGLPNIMIGT-AAGIPYVDFLr-vSLPYAVVSLVVAIAGLRWFFRndlpwkqsdedkaalkqqiegfdpwalvenksV 250 Pirellula sp. 1
Feature 1       #############              ###############                                      
BAC96066    274 GLFILTIATAVAFHAVLHfpp----viGMMMGLAYLQFFGYFlrktlaqslakktaiaiangdedalkrigsvvpfdvFH 349 Vibrio vulnificu...
P74635      224 LMAGGVIITLVLIFFVIGeslpvpippASVALMGACLALLLAsqsk-----------------------------idtVH 274 Synechocystis sp...
BAB02474    365 GVGLGALVFVPVFKALTGlpp----ymGILLGLGVLWILTDAihyges------------------------erqklkVP 416 thale cress
NP_146926   221 LIISLTFFTMTVIAMALRpllg--fplGFITMAGASQLALTVevlrrlg-----------------------lagmveFE 275 Aeropyrum pernix
NP_228742   224 FYLSIILTLVVLVLFSLQkplg-lesfEVALLAGFLSLAFLKkk---------------------------------dIE 269 Thermotoga maritima
NP_228851   225 LKKSLFVFLSTLVLFGLHsfve--velSLIALIAACALLLMLgk---------------------------------nFE 269 Thermotoga maritima
ZP_00007535 240 ILFAATIVTAVSFKNFLNlpp----alGMMLGLGYLQLWSYVlkqkgtrw--------------------rdddmvldSF 295 Rhodobacter spha...
NP_692951   224 LYKSVSVLLLTIMGFILHsivh--vsmTAIALSGAILLLLLTekd-------------------------------lhTE 270 Oceanobacillus i...
NP_833197   234 LLKSISILGLTILGFVLHsiih--vdaAVIAMTGATLLMLIGvke-------------------------------hdIE 280 Bacillus cereus ...
NP_867419   251 LLRSSVILLCTVIGFALAqplg--vgmDFVAMVGATAALLFAgk---------------------------------gVE 295 Pirellula sp. 1
Feature 1            ###################                       ################                 
BAC96066    350 RVSR-AEWDTLLFFYGVVMCVGGLSLLGYLEVVSFTlyt------kwDPVWANITVGFLSAIVDNIPVMFAVLSmep--- 419 Vibrio vulnificu...
P74635      275 NILRdVDWSTLIFFMSIFVIIGSLEKTGVTASLAQLlavvvgqniafGAIVLVFTVGLLSSVVPNIPLVVAMVPllkqyv 354 Synechocystis sp...
BAB02474    417 QALSrIDTQGALFFLGILLSVSSLEAAGILREIANYlda-----nipNVELIASAIGVVSAIIDNVPLVAATMGmydlt- 490 thale cress
NP_146926   276 NALKhVEWRALLFYAALFSLVGGLESEGVIEEIARLlvgsvssdpaiAYTVMYWSVGLLSLVIEHDALLLTFLYivkdaa 355 Aeropyrum pernix
NP_228742   270 DVFKeIEWGVIFFFIGLFLVVGALEEAGVLERISELvirlskgkmesTLISVLGISGLSSAFVDNIPFTATMIPvikkla 349 Thermotoga maritima
NP_228851   270 KVSEgIDWDTLFFYTGLFIISYSLEQIGVMEVIASFlkals-fnrflFVATVTWISILSTAFLSAVPATLIIAPtlkilv 348 Thermotoga maritima
ZP_00007535 296 HQIQrVEWDTLLFFFGIIFAVGGLGVLGYLTLASELlyt------dlGPTAANIIIGALSAIVDNIPLMFAVLTmdp--- 366 Rhodobacter spha...
NP_692951   271 HVFSkVEWVTLFFFIGLFTIVGGLEQVGIIDELARLlvattegdyvtTTILILWMSGIFSGFIDNIPFVAAMIPviqefe 350 Oceanobacillus i...
NP_833197   281 DVFAhVEWVTIFFFAGLFVLVGGLIDIGLISSLAKEvigvtngdigfAAILILWVSGIASATIDNIPFVATMIPliqdla 360 Bacillus cereus ...
NP_867419   296 DAIGkVNWTVILFFMGLFIIIGCVKHTGALKWVAQQvvlvsdnrielLVPLMGGFSAVASSIVDNIPVAATLIPivqdvs 375 Pirellula sp. 1
Feature 1                                 ####################                          ########
BAC96066    420 --------------------smsLGNWLLVTLTAGVGGSMLSIGSAAGVALMGAARGq----YTFFGHLKWSPVILLGYC 475 Vibrio vulnificu...
P74635      355 vnigfagpeilganfdgqlpaevLPLFYAMMFGATLGGNGTLVGASSNIVAAGISEQhg-rpISFHRFLRYGLPVMAVQL 433 Synechocystis sp...
BAB02474    491 ------------------sfpqdSEFWQLIAFCAGTGGSMLVIGSAAGVAFMGMEKV-----DFFWYFRKVSGFAFAGYA 547 thale cress
NP_146926   356 s----------------lagidpWNIYWGMAWSATLASNATTAAAPALYVAVAMSDReg-hrVRALEFLKYSLTFAFTSL 418 Aeropyrum pernix
NP_228742   350 vl-------------apetfsdlRPLWWALSLGACFGGNGTLIGASANVVGTSLIADrk--hITFWEYFKIGFPVLILSL 414 Thermotoga maritima
NP_228851   349 ------------------sqgfpASLWWVYAVGANLGTNLTPLGAVQNIVGLSLLEKytkhtVSFKEFFKVAWSFMFIPF 410 Thermotoga maritima
ZP_00007535 367 --------------------amsHGEWLLITLTCGVGGSMLAIGSAAGVALMGQAKGa----YTFMAHLKWTWAIALGYF 422 Rhodobacter spha...
NP_692951   351 s----------------ygmiylDPIWWALAIGACLGGNATLIGASANVVVAGMAESag-ekISFLRFMKFGMIIVFLSL 413 Oceanobacillus i...
NP_833197   361 tgl-----------glsvdspqiEVLWWALSLGACLGGNGTLIGASANVVVAGIAKReg-haFSYMDFLKIGLPLTIVAL 428 Bacillus cereus ...
NP_867419   376 g---------------gdtgvpaEPLWWTLVICCNLGGNGTPIGSISCVIAIYALKReagihVGWGTFLKLGGGIMVVQV 440 Pirellula sp. 1
Feature 1       #####   
BAC96066    476 ASIAVHLV 483 Vibrio vulnificus YJ016
P74635      434 VVAALFVA 441 Synechocystis sp. PCC 6803
BAB02474    548 AGIAAYLA 555 thale cress
NP_146926   419 IIHYIITL 426 Aeropyrum pernix
NP_228742   415 LVSGVYLL 422 Thermotoga maritima
NP_228851   411 IIATLYSL 418 Thermotoga maritima
ZP_00007535 423 ASIGAHLV 430 Rhodobacter sphaeroides
NP_692951   414 IVSSIYIY 421 Oceanobacillus iheyensis HTE831
NP_833197   429 LLSHAYIY 436 Bacillus cereus ATCC 14579
NP_867419   441 IGAIFYVM 448 Pirellula sp. 1

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