Conserved Protein Domain Family
FG-GAP_3

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pfam13517: FG-GAP_3 
FG-GAP-like repeat
This entry represents a repeat found in alpha integrins and related proteins in which form a 7-fold repeat that adopts a beta-propeller fold. This repeat contains a putative calcium-binding site. These repeats are found in multiple proteins from eukaryotes and bacteria and mediate diverse biological processes at both molecular and cellular levels, such as cell-cell interactions, host-pathogen recognition or innate immune responses.
Statistics
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PSSM-Id: 433275
Aligned: 681 rows
Threshold Bit Score: 28.7306
Created: 25-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_009227983     50 DINADGKMDLLVkgrnL---DkD--WN----PEV-FTLIN-TGQ-SLST-K------I-PFEI--------SNGWHkV-- 99   Prevotella ...
Q7NID6           25 DVNGDGAFEAFV----A---GfG--SA----NRV-LKWDG-S-HlVDVA-D------AvLADP--------ERQAI-G-- 70   Gloeobacter...
XP_028337740     62 DVDHDGDFEIVV----A---GyN--GP----NLV-LKYDRaQKRlVNIA-V------D-ERSSpyyalrdrQGNAI-G-- 116 
XP_002600740    305 DVNRDGKMEIFV----A---S-Y--GR----PNLvLKWSAeRRRyENIA-V------D-NPESpyyflrdpEGNGI-S-- 359 
WP_011700472    151 DLDRDGFLEIVV----Tg--AvG--SK----TNT-WVYNH-NGRlLDGW-P------Q-LAND--------NGYAW-Gvy 199  Syntrophoba...
WP_012910368    598 DRNGDGRLDLLL----N---S-R--NA----AVF-EQQPR-SGElYVFG-S------PrDVSTqn-----iEGHDT-S-- 646  Pirellula s...
XP_002600738    555 DFDNDGQIEVFF----NdivNwR--HGptapNRL-FKVTR-QGAqQDPT-IdqldigD-ALEP--------NGYGT-G-- 613 
jgi:Hbor_18790  283 DFDNDGSCEVFS----N---V-M--GAp---NRL-LRRR--EGAwVACD-Pg-----A-ATEP--------RGLGT-G-- 328 
Q7NID6          285 DFDNDGYEEIFF----N---NiG--QE----NRL-F-GRR-EGQwIPLD-P------AaAAEP--------LGLGT-G-- 330  Gloeobacter...
WP_012780507     75 NFDGSGIATMAM----V---K-RatSH----VIF-MRSAN-DGShYQIPfS------F-DVST--------AGNDFkG-- 123  Pedobacter ...
WP_009227983    100 ---VTPIDYNNDGYPDMLL 115  Prevotella sp. oral taxon 299
Q7NID6           71 ---VAAGDIDGDGREEIYV 86   Gloeobacter violaceus
XP_028337740    117 ---VTACDIDGDGREEIYf 132 
XP_002600740    360 ---VAACDIDGDGWEEIYI 375 
WP_011700472    200 nsnAAVYDLDKDGQGEIVV 218  Syntrophobacter fumaroxidans
WP_012910368    647 ---PTLVDFNRDGTKELLI 662  Pirellula staleyi
XP_002600738    614 ---GAAADLDGDGQLELIL 629 
jgi:Hbor_18790  329 ---ATVCDMDGDGTLELLV 344 
Q7NID6          331 ---AAVADFDGDGSLELLV 346  Gloeobacter violaceus
WP_012780507    124 ---IAAGDMNGDGVDELII 139  Pedobacter heparinus
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