Conserved Protein Domain Family
RING-HC_Topors

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cd16574: RING-HC_Topors 
RING finger, HC subclass, found in topoisomerase I-binding arginine/serine-rich protein (Topors) and similar proteins
Topors, also known as topoisomerase I-binding RING finger protein, tumor suppressor p53- binding protein 3, or p53-binding protein 3 (p53BP3), is a ubiquitously expressed nuclear E3 ubiquitin-protein ligase that can ligate both ubiquitin and small ubiquitin-like modifier (SUMO) to substrate proteins in the nucleus. It contains an N-terminal C3HC4-type RING-HC finger which ligates ubiquitin to its target proteins including DNA topoisomerase I, p53, NKX3.1, H2AX, and the AAV-2 Rep78/68 proteins. As a RING-dependent E3 ubiquitin ligase, Topors works with the E2 enzymes UbcH5a, UbcH5c, and UbcH6, but not with UbcH7, CDC34, or UbcH2b. Topors acts as a tumor suppressor in various malignancies. It regulates p53 modification, suggesting it may be responsible for astrocyte elevated gene-1 (AEG-1, also known as metadherin, or LYRIC) ubiquitin modification. Plk1-mediated phosphorylation of Topors inhibits Topors-mediated sumoylation of p53, whereas p53 ubiquitination is enhanced, leading to p53 degradation. It also functions as a negative regulator of the prostate tumor suppressor NKX3.1. Moreover, Topors is associated with promyelocytic leukemia nuclear bodies, and may be involved in the cellular response to camptothecin. It also plays a key role in the turnover of H2AX protein, discriminating the type of DNA damaging stress. Furthermore, Topors is a cilia-centrosomal protein associated with autosomal dominant retinal degeneration. Mutations in TOPORS cause autosomal dominant retinitis pigmentosa (adRP).
Statistics
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PSSM-Id: 438236
Aligned: 45 rows
Threshold Bit Score: 74.2428
Created: 2-May-2013
Updated: 17-Oct-2022
Structure
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Aligned Rows:
 
Zn binding site
Feature 1: Zn binding site [ion binding site], 8 residue positions
Conserved feature residue pattern:C C C H C C C CClick to see conserved feature residue pattern help
Evidence:
  • Comment:based on the structures of other RING-HC fingers with bound zinc
  • Comment:C3HC4-type RING-HC finger consensus motif: C-X2-C-X(9-39)-C-X(1-3)-H-X(2-3)-C-X2-C-X(4-48)-C-X2-C, where X is any amino acid and the number of X residues varies in different fingers
  • Comment:A RING finger typically binds two zinc atoms, with its Cys and/or His side chains in a unique "cross-brace" arrangement.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1            #  #               # #  #  #          #  #    
Q9NS56        100 DSKCPICLDRfdn---vsYLDRCLHKFCFRCVQEWSKnkaECPLCKQPF 145  human
EAL66888       97 DSTCSICLSPfen---ltFLDICFHQFCFVCILQWSElnqRCPLCKSEY 142  Dictyostelium discoideum AX4
KIY70913        9 VESCSICLHTykd---raIVPTCSHEFCFGCILEWSEqssKCPLCNQII 54   Cylindrobasidium torrendii FP15055 ss-10
OEU20463      183 VESCCICMCDvepn-dlaSINSCSHQFCFGCIEKWSErenKCPLCKVRF 230  Fragilariopsis cylindrus CCMP1102
XP_003388691   28 ELKCPICLEDydn---kaFVNVCFHAFCYVCIVQWSEvsnKCPMCKVSF 73   Amphimedon queenslandica
GAX18965      228 ESTCTICLCEpdke-evsALDGCNHLFCFSCIEKWSErenSCPLCKCRF 275  Fistulifera solaris
XP_027305988   30 DSLCPICMDNitd---aaYVDPCSHRFCYRCIRRWGRrnsTCPLCRQRI 75   mallard
NP_001323588   36 GKSCPICLENlterrsaaVITVCKHGYCLACIRKWSSfkrNCPLCNTRF 84   thale cress
ORX76673       98 LVSCPICLEHfsn---ktMLNPCYHAFCYICINKWSKvsqNCPLCKQPF 143  Anaeromyces robustus
XP_004348113   81 DDACPVCLGDfvd---ktMLESCFHIFCYECIRRWSAvnrMCPLCKTKY 126  Capsaspora owczarzaki ATCC 30864

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