5ZEY,6Q98,1P6V


Conserved Protein Domain Family
SmpB

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COG0691: SmpB 
tmRNA-binding protein [Posttranslational modification, protein turnover, chaperones]
Statistics
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PSSM-Id: 440455
Aligned: 887 rows
Threshold Bit Score: 141.699
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5ZEY_C         1 Mtkksa---ssnnKVVATNRKARHNYTILDTYEAGIVLMGTEVKSLREGQASLADAFATVDDGEIWLRNVHIAEYHHGT- 76 
WP_013087680   1 Mkknd-----ikiQKIVLNKKSSYEYTIEKKIEAGIVLYGWETKSIRKKKVDITRSYVEIKDKEAYISEMNISSEKSFSv 75 
WP_014353917   1 Mlknik---knniKIIVNNKYVQYNMFISKELEAGIALQGWEVKAIRKKKVNISKSYITIKNNSAYLIGALFQPIVACHp 77 
WP_041070162   1 Mnkrkd---nipsSIITKNKGAYYKYNIEKELIAGIVLEGWEVKAIRAGKINITDSYISLQKGEAYLFGATFQPLAMASs 77 
WP_041062740   1 Mskq-------nnSIILYNKKVQYDYFIEKKFEAGIVLNGWEIKSIRAGKVNITNSYVFLHNAQAYIVGMTIKPLICSSn 73 
WP_066283712   1 Mkkkkvv-nqnnlNIISINKRIYHEYYINEEIEAGLVLLGWEVKSLRARKVNISNSYILINHGTAYLLGAIITPLYTSNf 79 
WP_067565317   1 Mtqkka--hntcsVVIAQNKRARYEYFIKQEFEAGLSLQGWEVKSLRAGKANISGSYVMLKNGEAYLFGATFQPLIAASs 78 
WP_067568219   1 MlhatrkvnksdyVTIAQNKRARHEYFIEQELEAGLSLHGWEVKSLRAGKANINDSYVLLKDGEAYLFGATFQSFTEASs 80 
WP_067498603   1 Miekki--rkadyTAIAQNKHAKYEYFIKKEFEAGVSLQGWEVKTLRAGKVNISNSYITLKNGEAYLFGATFQPLMTAPs 78 
WP_067569280   1 Mnkkyq---scliTNIWQNKNIKYKYFIEKELNAGLSLQGWEVKALRANKFNINNSYIILKNGEAYLFGAIFQPLILSFs 77 
5ZEY_C        77 ----WTNHAPRRNRKLLLHRKQIDNLIGKIRDGNLTLVPLSIYFTDGKVKVELALARGKQAHDKRQDLARRDAQREVIRE 152
WP_013087680  76 nkdlNHLEKNKRSRKLLLKKNEIYFLSSLINRKGYTAVAISLYWKNNICKIEIGIGKGKKQYDKRIKIKENEWKIRKMRT 155
WP_014353917  78 ----HLVYDQMRSRQLLLKKSELNSLIGYSKINGFTIVVCCLYWKNSYIKAKIGVAKGKTKHDKRLNIKNKEWKIKKMRL 153
WP_041070162  78 ----HIICEAVRPRKLLLNRQEIKLIYNYINRDGYTSIPLSLYWKNAWCKITIGIARGKKYHDKRSTIKKREWEVYKKRL 153
WP_041062740  74 ----KILEDSQRNKKLLFHKHEISSIYGYVNRKKYTLVATSLYWKKAWCKIEIGLAKGKKTIDKRENIKNREWKISQSRI 149
WP_066283712  80 ----YDLYDPMRTRKLLLNQYELNSLFGKVNRIGHTIVALSLYWKSSWCKIKIGIVKGKKKYDKRYEIKHREWRLNKEKI 155
WP_067565317  79 ----HVICNPMRIRKLLLNKCELNAVFGRVNRESYTVVSLLLYWKNEWVKLKIGVAKGKKEHDKRTDIKEREWQLNKARI 154
WP_067568219  81 ----HVVCDPMRTRKLLLNKKELDTLFGCVNYKHYTVIALSIYWKMTWIKVRIGVAKGKKEYDKRIEIKEREWQVTKGRI 156
WP_067498603  79 ----YIIYEPMRTRKLLLNKRELDSLFDYVNREGYTVVPLLLYWKKSWVKIKICVAKGKKRFDKRVNIKEREWLLNKARI 154
WP_067569280  78 ----YIKNDKMRIRKLLLNKHELKFLFNKVKHNNYTIIPLSIYWNKSWLKIKIGIAKGKKEHDKRLDIKKREWKLDKNRL 153
5ZEY_C       153 LGRR 156
WP_013087680 156 LKNK 159
WP_014353917 154 LKIK 157
WP_041070162 154 LKKQ 157
WP_041062740 150 LSKK 153
WP_066283712 156 MRST 159
WP_067565317 155 MNLV 158
WP_067568219 157 IKNR 160
WP_067498603 155 IKHI 158
WP_067569280 154 IKFN 157
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