Conserved Protein Domain Family
ligC

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PRK08224: ligC 
ATP-dependent DNA ligase; Reviewed
Links
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Statistics
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PSSM-Id: 236191
Aligned: 79 rows
Threshold Bit Score: 417.374
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
158316925  18 MLARAAPQIPPD---MLYEPKWDGFRALVFRDGAELEITSRNTRPMTRYFPELVEVLLAALPDRCVLDGEIVVVGPNGLD 94 
13476676   18 MEARTAEALPREdglWQYEPKWDGFRCLGFKSGKAVDLRAKSGKPLGRYFPELMAALSALAATEFVIDGEIIVEIEDRAS 97 
13488524   18 MEARAAGVLPRDdgpWQYEPKWDGFRCLAFKAGKAVDLRAKSGKPLGRYFPELMAALSALAATEFVIDGEIIIEIEGRAS 97 
209547230  20 MEARSADDLPDDr-gWQYEPKWDGFRCLVFKEGSAVDLRAKSGKPLGRYFPEISEFFANLSLERFVVDGELVIDIDGKLS 98 
197121278  17 MEARLADVLPADd-gWQFEPKWDGFRCLLFKQDAEVVLQSKAGQPLGRYFPELVAAGRSLRAPRLVLDGEIVVPSGLGLS 95 
86157243   17 MEARLADVLPADe-gWQFEPKWDGFRCLLFKQDAEVVLQSKAGQPLGRYFPELVAAGRSLRAPRLVLDGEIVVPSGLGLS 95 
220915982  17 MEARLADVLPADd-gWQFEPKWDGFRCLLFKQDAEVVLQSKAGQPLGRYFPELVAAGRSLRAPRLVLDGEIVVPSGLALS 95 
217979817  21 MEARLADLLPEDs-aWQYEPKWDGFRCLAFRAGEDLELRAKSGKPLQRYFPEVAAYLRQIPAGRFVVDGELIIEIDGEFS 99 
197106170  16 MEAKLVDEVPREs-gWRFEPKWDGFRCLAFRAGDEVALRAKSGKPLDRFFPDVVAALRALPVERFVVDGELTIEVEGRLS 94 
110635034  26 MEAKTVETLPEEp-gWDFEPKWDGFRCLAHRDGDKIELYAKSGKPLGRYFPEVVEIVRALPGRKFILDGELVIAQGEALS 104
158316925  95 FEELSQRVHPATSRVAKLALETPVSFVAFDLLALGD-EAFTDQPFARRRAVLEEV-LaghAGPAApgtaparripsgVYL 172
13476676   98 FDALQMRLHPAESRIRKLSRETPAQLVVFDMLVAPGgRLLVELPLHDRRAEAEDL-V---AKAKTk----------tLRL 163
13488524   98 FDALQMRLHPAESRIRKLSRETPARLVVFDMLVAPEgRPRMELPLRDRRAEAEDLvAkakTKT--------------LRL 163
209547230  99 FDALQMRLHPAESRVQRLSAETPAKLVLFDMLMGIDgIPILDQDLEFRRAALEAF-AkdaINQGR------------LIL 165
197121278  96 FDALLQRIHPAESRVQRLARETPARLVAFDLLVDGDgRRLVESPLEVRRAALLRE-A---PGFPPe-----------LSV 160
86157243   96 FDALLQRIHPAESRVLRLARETPARLVAFDLLVDGDgRRLVEAPLEVRRAALLRE-A---SGFPPe-----------VSV 160
220915982  96 FDALLQRIHPAESRVQRLARETPARLVAFDLLVDGDgRRLVESRLEVRRAALLRE-A---PGFPPe-----------LSV 160
217979817 100 FAALQARLHPAASRIRRLSGETPARFILFDMLVDAEgAVLIGEPLLTRRRALEAFmAragAPSRQ------------LEL 167
197106170  95 FEALQLRLHPAESRVRKLAAAQPAALTLFDCLMDAKgRSLVEAPLSKRREALEAF-VarlGGAPA------------VRL 161
110635034 105 FDALQLRLHPAESRIRKLARETPAMLILFDMLMKPDgESLMTAPLTARRSALESF-LaqaVVSG-------------IRL 170
158316925 173 TPSTGELDMARQWFELYe-GAGLDGLVAKPPDGAYQPDKRA-MFKIKHDRTADCVVAGYRPHKNDpEAVGSLLLGLYADP 250
13476676  164 SPATTSLATADKWLKGAgtGGATDGVVAKLLNDPYKPGERA-MVKVKPLRTADCVVGGFRYQKGK-RQVGSLLLGLYNGD 241
13488524  164 SPATTSLATADNWLKGAg-SGSIDGVVAKLLNGPYRPGERA-MVKVKRLRTADCVVGGFRYLNGK-RQVGSLLLGLYNGD 240
209547230 166 SPFTRDRIEATRWLSAS--GADTDGVVCKRVDGLYLPGERA-MMKVKRLRTADCVVGGFRYESDS-HFVGSLLLGLYNDQ 241
197121278 161 SPATLRRADAEAWLATP---SGTDGVIAKRLGVPYASGERDaMVKVKRVVTLDAVVGGFRRGQRG-GPPASLLLGLHGPD 236
86157243  161 SPATLRRADAEAWLATP---SGTDGVIAKRLGVPYASGERDaMVKVKRVVTLDAVVGGFRRGQRG-GPPASLLLGLHGPD 236
220915982 161 SPATLRRADAEAWLATP---SGTDGVIAKRLGVPYASGERDaMVKVKRVVTLDAVVGGFRRGQRG-GPPASLLLGLHGPD 236
217979817 168 SPVTLDPKKAHRWLEDSr-RGAIDGVMAKRRDGFYEPGARA-MIKVKRKRTADCVVGGFRYAANS-RKVGSLLLGLYDDA 244
197106170 162 SPFTEDRARACRWLDEA--GFVLDGVVAKRADGPYVPGERA-MLKIKKIRTADCVVGGFRHAKGT-EAVGSLLLGLYGDD 237
110635034 171 SPHTRDRREAEAWLEGA--GGALDGVIAKKFDGAYESGERA-MLKVKRIRSADCVVGGFRYGKDS-TLVGSLLLGLFNGE 246
158316925 251 ADeadpenatdparespLLSVGVTSAFPMARRRELVRELAHLVVPIDshpwarqgpENAAQPGgdageepaaaagqpart 330
13476676  242 GL---------------LDHVGFTSTIANDERAVLTQRLGHLLGGSG---------FTGKAPG----------------- 280
13488524  241 GL---------------LDHVGFTSTIANDERAVLTEKLENLRGGSG---------FTGKAPG----------------- 279
209547230 242 GD---------------LDHVGFTSTITDAERPELTSRLEALRGGSG---------FTGKAPG----------------- 280
197121278 237 GR---------------LHHVGHV-TLAPRQRERFAALLEPLAAPGAp-------gFTGEAPG----------------- 276
86157243  237 GR---------------LHHVGHV-TLAPRQRERFAALLEPLAAPGAp-------gFTGEAPG----------------- 276
220915982 237 GR---------------LHHVGHV-TLAPRQRERFAALLEPLAAPGAp-------gFTGEAPG----------------- 276
217979817 245 GK---------------LDHVGFTSAISEAERQALTEKLEALRGPPG---------FTGRAPG----------------- 283
197106170 238 GL---------------LHHVGFTSTISNAERPELTRRLEALAGGSG---------FTGNAPG----------------- 276
110635034 247 GK---------------LDHVGFTSMISNEERPALTRRLEKLKGPPG---------FTGKAPG----------------- 285
158316925 331 pwdvGESRWARGRDLSFVPLRPELVVEVRYDHME-GPRFRHTTQFVRFRPDRDPGGCTYAQL--ERPVRFDIADVL 403
13476676  281 ----GPSRWSSERSGEWEPVRPELVVEVRFDQVT-GNRFRHGTKLLRWRPDKEPRQCTFGQI--E----------- 338
13488524  280 ----GPSRWSTERSGEWEPVRPELVVEVRFDHVT-GDRFRHGTKLVRWRPDKAPLQCTFEQL--E----------- 337
209547230 281 ----GPSRWSTRRSSEWEPLTPELVVEVRFDHVT-GHRFRHGTKLLRWRPDKRPRQCKFEQI--ER---------- 339
197121278 277 ----GPSRWARGRSTEWIPVRPELVVEVAYRHAA-GGRLRHGARLLRVRPDKAPGQCVMRDLpggearfg------ 341
86157243  277 ----GPSRWARGRSTEWIPVRPELVVEVAYRHAA-GGRLRHGARLLRIRPDKAPGQCVLRDLpggearfa------ 341
220915982 277 ----GPSRWARGRSTEWIPVRPELVVEVAYRHAA-GGRLRHGARLLRVRPDKAPAQCVMRDLpggearfg------ 341
217979817 284 ----GPSRWSTERSSKWEPLRPELVVEVCFDQVTdGR-FRHGTRLMRWRPDKSPRQCKMAQL--N----------- 341
197106170 277 ----GPSRWSTERTGEWTPLRPELVVEVRYDQVT-GERFRHGTKLVRWRPDKAPRQCTFEQI--RPPARAGGVPSA 345
110635034 286 ----GPSRWSTERSSEWEPLRHELVVEVAYDQVT-GDRFRHGTRLLRWRPDKAPHQCTFEQLehEARPGKLIEEVI 356
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