1RLG,1RA4


Conserved Protein Domain Family
eL8_ribo
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TIGR03677: eL8_ribo 
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ribosomal protein eL8, archaeal form
This model specifically identifies the archaeal version of the large ribosomal complex protein eL8, previously designated L8 in yeast and L7Ae in the archaea. The family is a narrower version of the pfam01248 model which also recognizes the L30 protein.
Links
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Statistics
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PSSM-Id: 188367
Aligned: 11 rows
Threshold Bit Score: 143.745
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
1RLG_A         2 YVRFEVPEDMQNEALSLLEKVResgKVKKGTNETTKAVERGLAKLVYIAEDVDPPEIVAHLPLLCEEKNVPYIYVKSKND 81  Archaeoglobus f...
WP_011170585   4 YVKFEISQELEEKTAEVVANAE---KIKKGANEVTKAVEKGIAKLVVIAQDVQPEEIVAHIPVICDEKGIAYSYSSTKEA 80  Methanococcus m...
WP_011448597   4 YVTFEVSEEIQNKALEAVEAAResgKIKKGSNEATKAIERGIAQLVLIGGDVEPAEIVMHLGPLCEEKKIPYLFISKQND 83  Methanospirillu...
B64450         7 YVKFKVPEEIQKELLDAVAKAQ---KIKKGANEVTKAVERGIAKLVIIAEDVKPEEVVAHLPYLCEEKGIPYAYVASKQD 83  Methanocaldococ...
WP_004042964   4 YVDFDVPADLADSAVEALEVARdtgIVKKGTNETTKSIERGNAQLVLIAEDVSPEEIVMHLPELADEKGIPFIFVETQDD 83  Haloferax
WP_011498391   1 MVKFEVPDELADKALEAIELARdtgKIKKGTNEATKAIERGITKLAVIAADIEPSEIVAHIPALCEEKNTPYIFVKQQKE 80  Methanococcoide...
WP_010916707   5 YVKFETPEDVSQKALDLVESAFrsgKIKKGTNEVIKSIERGESKLVVIAEDVNPPEVVYYLPSLCEDKKVPYVYVKKKAD 84  Thermoplasma vo...
WP_011153308   7 YVKFEVPEELANKVYELVRKARetgKIRKGTNETTKAVERGQAKLVIIAENVNPPEIVMHLPALCEEKGVPYVYVPSKEE 86  Nanoarchaeum eq...
WP_011695524   6 YVRFDVPPELASKSLEALELARdtgRIKKGTNEATKAVERGVAKLVIIGEDVEPPEIVAHLPPLCEEKNTPYVYVKKQSD 85  Methanosaeta th...
WP_010875894  13 YVKFDVPKELADKAAEALEIARetgKVSKGTNEVTKAVERGVAQLVLIAEDVEPAEIVAHLPLLAEEKEIPYIYIPTKDE 92  Methanothermoba...
1RA4_A         7 YVKFKVPEEIQKELLDAVAKAQ---KIKKGANEVTKAVERGIAKLVIIAEDVKPEEVVAHLPYLCEEKGIPYAYVASKQD 83  Methanocaldococ...

1RLG_A        82 LGRAVGIEVPCASAAIINEGELRKeLGSLVEKIKGLQ 118 Archaeoglobus fulgidus
WP_011170585  81 LGKAAGLEVPTSAIAVVAEGSADE-LKDLVEKLNGLK 116 Methanococcus maripaludis
WP_011448597  84 IGAACGLEVGSAAAAIVKSGKAKEtIDEIAAQIAALK 120 Methanospirillum hungatei
B64450        84 LGKAAGLEVAASSVAIINEGDAEE-LKVLIEKVNVLK 119 Methanocaldococcus jannaschii
WP_004042964  84 IGHAAGLEVGSAAAAIVDAGDASDdVEDIATKVEDLR 120 Haloferax
WP_011498391  81 LGAACGIGVGCAAVVITDAGKGSElVEDVAQKVAALK 117 Methanococcoides burtonii
WP_010916707  85 LGSKVGI-ASAASVSIVDYGKNEElYKSIVSAVEQLK 120 Thermoplasma volcanium
WP_011153308  87 LGKAAGINVSAASAAIIDAGEAKDlLEEIIRSVQELK 123 Nanoarchaeum equitans
WP_011695524  86 VGAAAGLSVKSAAAAIIEPGKGKElLEEIIQKLQALK 122 Methanosaeta thermophila
WP_010875894  93 LGAAAGLNVGTASSAIVEAGDAEDlIKEIIEKVEELK 129 Methanothermobacter thermautotrophicus
1RA4_A        84 LGKAAGLEVAASSVAIINEGDAEE-LKVLIEKVNVLK 119 Methanocaldococcus jannaschii
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