Conserved Protein Domain Family
sarcinarray

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TIGR04209: sarcinarray 
sarcinarray family protein
Members of this protein family are exclusive to archaea, probably all of which have S-layer surface protein arrays. All member proteins have an N-terminal signal sequence. The majority of known members belong to codirectional tandem arrays in the genus Methanosarcina (nine in M. barkeri str. Fusaro). Nearly all members have an additional 50 residues, (trimmed from the seed alignment for this model), consisting of low-complexity sequence rich in E,N,Q,T,S, and P, followed by a variant (PAF) form of the PGF-CTERM putative archaeal surface glycoprotein sorting signal. The coined name, sarcinarray family protein, evokes the predicted archaeal surface layer localization, the taxonomic bias of known members, and the tandem organization of most members.
Statistics
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PSSM-Id: 275055
Aligned: 9 rows
Threshold Bit Score: 188.74
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_011034117  11 ILILFTSTASAYNPYG---DVyeyNLYFNGKLLNTTEVPKPVLKIGEPFDVKIDFAIYKKCEMSIKLSE--IEK-G--YF 82  Methanosarcina ...
WP_013897954  16 LIFLCTPISSSSNKPG---DI---QVYYNGVHLPGDNVAEPTLKIGEPFNVRINFTVYGDYKIYVKLDD--YGD-N--YF 84  Methanosalsum z...
WP_011307404  11 lllslVDIVSASSPYG---SI---DVYYNDKLLPGAEVAKPLLKIGEPFNLKVNMTVYQEYKVSGQLTE--LGE-G--YF 79  Methanosarcina ...
WP_011034119  12 ILLMLMGVVSATSQYG---SI---DVYYNDEILPGKEVAKPTLKIGEPFKVRIEMTLNQTSTVFVQVCS--LGG-N--FF 80  Methanosarcina ...
WP_011021180  17 CLVAFPNISSASSPYG---EM---QVYFNDRLLPGSEVAKPTLKIGEPFNVSINLTVYQKSEVSVMLSE--IGD-G--DF 85  Methanosarcina ...
WP_011307403  12 FLLIIPSTTLAESQYG---SM---DVYYNDKLLPGKETAKPTLKIEESFKVKINLTVYQKSDVYVSLSC--MEK-D--SF 80  Methanosarcina ...
WP_013038073  26 FTASFSTGVLANDSYA---VT---EVYCNGELYPEYFTPSPVLHANESFSLAVEMTVQQASVVDVNLNQhiLDS-Ga-SL 97  Methanohalophil...
WP_012036716  11 lllAVISLSSSDVDAR---SI---KAYFNCQ---EATVENVSLQVGEPFTVDLYMTPDGDSFAYATLME--PGYtN--AY 77  Methanocella ar...
WP_012901694   6 LALAAVILVSMAGDAEarhVI---KAYYNGQ---EATVTGVVLKVGEPFTIDLYVTPDRYATVSARLRE--PGG-GleSY 76  Methanocella pa...
WP_011034117  83 VILNGStPKMDVYRAD-VVEKNSTITYEWTVKPTEKWKGGSLPIDLVYQIDDFETKNSLVHGSFTIAYPYISNEHYE 158 Methanosarcina mazei
WP_013897954  85 VVQDGP-SPVGIYSDV-ILRSDECHAFEWTVYPTDKWAGGFIPLDFHYSMVERGNHVPVAHGAFTVAYPYISHEHYD 159 Methanosalsum zhil...
WP_011307404  80 EVVDGP-SKMNRYSST-ILKANESHVFEWTVVPTDKWAGGSLPINFHYSIVEKGNPEPVVNSEFTTAYCTISYEHYQ 154 Methanosarcina bar...
WP_011034119  81 EVKEGP-SEFGKTFYI-KSLDPGKHVFEWTLVPTDEWAGGSIPINFWYQINLIEEDEPAVKGEFTVAYCTISNEHYE 155 Methanosarcina mazei
WP_011021180  86 VILNGFtKEMNKYGSK-VMEKDSSKVFEWTVIPTENWAGGSIPVNFVYQINDFETGKILVNSGFTIAYPYISNEYYE 161 Methanosarcina ace...
WP_011307403  81 KIIKGPtSRIEEYSKPdILEANSSKEYEWTVEPTEKWSGGSLPLDIYYTILAHGDSEPLINSGFTVAYCTISNEHYQ 157 Methanosarcina bar...
WP_013038073  98 EIQTGP-CGFNSTHSR-EFAPNETFTYRWIIREAENTTSAPVPVEFRYSINQVNSPELTIEHSSIVVTPYITDECVE 172 Methanohalophilus ...
WP_012036716  78 GSISG--DPMWDTLTR-RCNESGPAHFSWVLAANDNWVNGTAPVNIHCQLNREGDTRPYALAYFTVVEARILPAESD 151 Methanocella arvor...
WP_012901694  77 GRISG--DPVDIVRKK--GGTGDTVHFQWVLAPTDAWAGGTAPLDIQYNVWG-ETMDGDVQGCFTAVEAYISPVKYG 148 Methanocella palud...
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