Conserved Protein Domain Family
ArsS_fam_HK

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NF038389: ArsS_fam_HK 
ArsS family sensor histidine kinase
ArsS in Helicobacter pylori is a sensor histidine kinase participating in a two-component system that controls the response to acid conditiions encountered during the process of gastric colonization. This HMM identified ArsS itself but also a broader collection of apparent orthologs from closely related non-gastric colonizers such as Helicobacter hepaticus, Campylobacter jejuni and Wolinella succinogenes. See BlastRule NBR014349 for specific identification of ArsS itself, distinguished by a signature His residue that becomes protonated at low pH.
Statistics
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PSSM-Id: 468500
Aligned: 47 rows
Threshold Bit Score: -1
Created: 24-Apr-2023
Updated: 3-May-2023
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_013326332   5 HAVLLTVLFALTVSLVSLSAIFWEFYKLNKEQYINHIFTKYSVITQIYREHQQRQSSEIMLEANLAVY-NLEVTKDE--K 81  Sulfurimonas au...
WP_013136373   4 ISITAFINTIFVLALAAITTTFLFFVKLDKEKSNQERQQRYSIIANSVLNSFELQPKEDQLRKLYSQFeVNPIDDR---I 80  Arcobacter nitr...
WP_004510477   5 QSIFFTILISFLISILLVIISFIIILANSYKAQEEQIYDRYIPISKMINRIE--FDFSEEIIKNFEEMnYKLYIEKKeiN 82  Aliarcobacter b...
WP_014473271   4 QSIFFTIAVSFIISILLVGISFLILLTHDFRMKEGRLLDKYMPVSKMVNRQD--FKFDDIFIKNLTEMnYSLLTEMSdiN 81  Arcobacter sp. L
WP_013134487   4 ESIFFTVTISFVISIFLVIASFIILVLHTQDDKEKHLSKKYLPVAKMVLEQQRTNGLTKFFVESLSNMdMEFINDIGkmN 83  Arcobacter nitr...
WP_008339208   4 NSIIFTITITFIIALVLVLVSFGILYKVSEKREDFLIVKRNMEATNMFFREFKHGGLTKKLEEDLKLInYSIISDQTeqN 83  Sulfurimonas go...
WP_008339818   4 HSILLRIVLSFFLAIVATTALFKVMHKHEFTNEREKLRVHYHHVAMSVMRWKIGESTYDELLVALKKDnISVVEDKKlyK 83  Sulfurimonas go...
WP_008339311   5 HSILFKLNIIFIITIISVTVIFLMLDGFIHKRSNFDLGFHLRHIDRNLHRDGEIEIKNLILPQTLEIVeDMSIVTKAkpI 84  Sulfurimonas go...
WP_012674959   7 NSILFRISLAFLLIIVLSSTFFYILYKNAKETELRDLIKNAVLLVSSDRSGLSKNIESNYELIEDPEFiYTVYTKGSieL 86  Sulfurihydrogen...
WP_012458877   6 NSILFKISLAFLLIILLSSVFFYFLYKNAQEKELRDFIRKALLTVSSEGTNFPQKFETNYKVIEDPEAiYKIYTNSKilM 85  Sulfurihydrogen...
WP_013326332  82 LKKEIFeKGKILKRegfksfntsllindkglytknvvtNLRATMIQYKRNIYFHIETPNG-DILIKDNELKPYSYINLLY 160 Sulfurimonas au...
WP_013136373  81 KKLDIInHAKELMFqes--------------------sigRVRIYEYYNKYYIYVQKMSY-NVLLLDLKSKPYNRSIALV 139 Arcobacter nitr...
WP_004510477  83 KITNDKnMKIFSERihp-------------------khGDIFRILKNNTDYYLYMKVRDNeVLVKDQNGFSNSRQIYIIL 143 Aliarcobacter b...
WP_014473271  82 SITYNHkTKVLFERihp-------------------ksNDVFRILNLNDTNYVYMKRKGDtVLIKDENTINSNSHIYIIL 142 Arcobacter sp. L
WP_013134487  84 AVLYNPqTKVALERry---------------------rTILVRVLDLHGDSYLFIKSDGLeIMFKDSDYKHVNPLIYLIV 142 Arcobacter nitr...
WP_008339208  84 KILNDPnLKHSEVEtrg-------------------rgRAKIQQLRLADISYVYIHTIRGnVILLNNN-QAVSHKGTILI 143 Sulfurimonas go...
WP_008339818  84 SIQN-----LKKFDtvs-------------------caKGDFHLYERDSFRYVIVPPEVGtMLLKDENTRSIN-VDYVWW 138 Sulfurimonas go...
WP_008339311  85 EKRDFFkQPPKVPFikehgkp----------pppffkrEHSFDLLRYKDTIYVHIKEKNFeLLLRYHEQEYKQIVLFIRV 154 Sulfurimonas go...
WP_012674959  87 ERDFLT---------------------------------IKIFLIKYENTHYVLVNQFGIs--YLVKKKGEFSLHRIVVI 131 Sulfurihydrogen...
WP_012458877  86 ERDFLT---------------------------------VKIVLLVYEGNKYLLINRFGIs--YLVEKSDEFELHRVVIV 130 Sulfurihydrogen...
WP_013326332 161 SYITIfmIISLSFILILQRLRPLIRLRKKIELYGNGNMD-ISFKTNrdDEIGAVANELEHARQKINTILESRTLFLRNLM 239 Sulfurimonas au...
WP_013136373 140 IYIFAvaIFLSLYFAIRKKFIPLRTLDKQIQKFSSGDKN-IKLDFQnnDEIGKIAKSFNDAIRNINNLTDSKNLFMRNMM 218 Arcobacter nitr...
WP_004510477 144 VFSILliTITILYFMSLKKLMPLKVLKDKVKSLGDENFDfEYENIEakDEVSSLAMEFKKTSLKLKNLKEARNVFIRNIM 223 Aliarcobacter b...
WP_014473271 143 VFTILliTIILIYLITLRKLMPLKVLKDKVKTLGDENFDfECCNLKgkDEVSLLANEFKKSAEKLKSLKEARNIFIRNIM 222 Arcobacter sp. L
WP_013134487 143 VFAVLfiAIILSFITTWKRLYPIKLLKDKVITLGEEDFDfEYDTNDs-DEVSQLAIEFKNTAKKLKNIKESRNVFIRNIM 221 Arcobacter nitr...
WP_008339208 144 VFIVIflTFIFLFINTLNKLRPLNILKDKVQNFGDEEFDvSCS-SDkkDEISLLANEFDKSAKKLKKLKESRNIFIRNIM 222 Sulfurimonas go...
WP_008339818 139 LYAAFiaIMLLLLLSIAISLYPLKHLQLQIRRFGEGEVDiDFSSTRs-DEIAEVSNEFNKSAKKIREILQARIIFLRNIT 217 Sulfurimonas go...
WP_008339311 155 AYFVFlgILIIVYYMIRKNIQSLKTLQNSLKDYENG-VVdATKVLDgkDEIALVSKQFYKVASKLEAVNESRKLFLRNMM 233 Sulfurimonas go...
WP_012674959 132 GWVMFnlVILGIYIGIVKSFYPLKVLREKIKALKSG-NLnVSIDIKnnDEIGFIAKEFNEAINTLKKNEEVRKWFLRNIA 210 Sulfurihydrogen...
WP_012458877 131 AWIFFniLMLILYVGIIRSFYPLKILREKIKLLKAG-NLdISVEISsnDEIGFIAKEFNEAIKSLKKNEEVRKWFLRNIA 209 Sulfurihydrogen...
WP_013326332 240 HELKTPIAKGTIATQMLDSQKQRDRFSSIFKRLETLVTEFAMIEEVTSLDDKKDFSEYRLLDVIDGAIDMAMVDKEHVTM 319 Sulfurimonas au...
WP_013136373 219 HELKTPITKAMFIVESLDDNKNKEVLGRAFERMNNIIKELATVEKLSSNMSVIYKENTTFFCIYKKAMNILLIDASTIST 298 Arcobacter nitr...
WP_004510477 224 HELKTPITKGKFLTQLEQNEENNEKLKSVFDRLESLINEFATIEELISSTKNIEKKVYFLDDIIDNAKDILMIEDEKVIQ 303 Aliarcobacter b...
WP_014473271 223 HELKTPITKGKFLTSLEQNEQNNEKLKSVFNRLESLINEFASIEELISSSKNIEKKFYFLDDIVDNAKDILMIEDEHIIS 302 Arcobacter sp. L
WP_013134487 222 HELKTPITKGKFLSELENSDENAEKMRRVFTRLESLINEFTQIEELISSTKNIVKNNYFLDDIIDNATDMLMLEDDVIIS 301 Arcobacter nitr...
WP_008339208 223 HELKTPITKGKFLTELPQTSENNEKMQKVFYRLETLINEFASIEELMSTKKVLDKKDYYLADVIDNAVDILMCDEESVVH 302 Sulfurimonas go...
WP_008339818 218 HECKTPITSGKLALEFIEDSKSKNVLNNVFTRLELLLKEFVHIEKITATDQKLQKKLYPLTDVIGQATDMLFLEPDSIKN 297 Sulfurimonas go...
WP_008339311 234 HELKTPLTKSKLYLGFMEESKIKDGLELSLNKLELLIDDMANIEKITTDNVDIDKKDFRAIDIIDNAMDMLFINKNGVII 313 Sulfurimonas go...
WP_012674959 211 HELKTPITKGKIAIELLEDEKGKQHFERIFNRLEFLVNQLMTVEKIASKDLKLKFECVDVKKVIENAISLLLSYEKPNVH 290 Sulfurihydrogen...
WP_012458877 210 HELKTPITKGKIAIELLEDEKGKQHFEKIFNRLEFLVNQLLMMEKLATKNLELKLECHSLENLINSGISLLLSEDKNNVI 289 Sulfurihydrogen...
WP_013326332 320 KIS-GKIKVHVNYRLYTTAIKNMIDNAMKYSTDSHITILMNDkNELCFESKGECLAHPLQYYIEPFTKE---NPSKNSFG 395 Sulfurimonas au...
WP_013136373 299 KMS--NFDLKVDIALFSIIIKNLIDNAIKFSPNHHATLIATQ-KRIEVISNGEKLKYDLNYYTEPFSQE---EKRKDGFG 372 Arcobacter nitr...
WP_004510477 304 NYE--NKKIEVNFKLFSIAIKNLIDNAVKYSPNKEVTIKVENeN-IIFENMGKELEAPFEKYFEPFFSSe--DKSKNSFG 378 Aliarcobacter b...
WP_014473271 303 KYE--NKKLEVNFKLFSIAIKNLIDNAVKYSPNKEVIIKNEDeN-IIFENEGKALDEPFERYFEPFFSNe--DKSKDSFG 377 Arcobacter sp. L
WP_013134487 302 KYE--NKKLNVNFKLFCLAVKNLIDNAIKYSDDRKVTIKTNNqDEIIFENSGEGLKYPLEKYFEPFFANe--SKSKNSFG 377 Arcobacter nitr...
WP_008339208 303 EYE--NIKINIDFKLFSIAMKNLLDNGIKYSPDKRVVVKTEDgK-IIFENIGQELQHSLQDYYEPFFNGd-nVKSNQSFG 378 Sulfurimonas go...
WP_008339818 298 NFS--KRRLEINFELFTIVFKNLIDNGLKYSQDNDFYIECEEhG-IHFCSRGDKMDEELDYYVQPFTKGe--MKASESFG 372 Sulfurimonas go...
WP_008339311 314 KDEs-TMVMSVDFKLFSIVLKNLIDNGIKYSADGMVFVECKD-EKIYVSSRGERLEYNFVNYLEPFFKGdlnEINQRGFG 391 Sulfurimonas go...
WP_012674959 291 TVFeETLKINVDVNIFSIAIKNLLDNGLKFSEDGKVEVIVKD-KRIYFKNKGSKPPFDKELLFEPFIKEt-sLKNQTGLG 368 Sulfurihydrogen...
WP_012458877 290 IDLkESIKIKADNNIFPIALKNLIDNGLKFSEDNKVKIVVEN-KMIEFRNKGNKPSIDIDMIFEPFIKEt-tLKNQSGLG 367 Sulfurihydrogen...
WP_013326332 396 LGLYLVDSILKAHGEVLAHEYENGVNRFIFA 426 Sulfurimonas autotrophica
WP_013136373 373 LGLYIVKTTIELHDFKFKYAYENGRNHFIID 403 Arcobacter nitrofigilis
WP_004510477 379 LGLYIVYNIFKANGYILEYEHLNGLNRFICK 409 Aliarcobacter butzleri
WP_014473271 378 LGLYIVHNILKANGYILEYEYVDGINRFVCK 408 Arcobacter sp. L
WP_013134487 378 LGLYIVNSILKANNCILKYEYKDEINIFKIA 408 Arcobacter nitrofigilis
WP_008339208 379 LGFYIISNILNANGFKLIYKHENGINNFIIY 409 Sulfurimonas gotlandica
WP_008339818 373 LGLYIVDAILRKHNYTLSYKYENGYNCFTIE 403 Sulfurimonas gotlandica
WP_008339311 392 LGLYIVNEILLKHRFEFLYEHKNDKNIFIID 422 Sulfurimonas gotlandica
WP_012674959 369 LGLYITKFILDFHNVKIDYTYENGENVFTLD 399 Sulfurihydrogenibium azorense
WP_012458877 368 LGLYITKFILDLHKISINYKYENQENVFMLD 398 Sulfurihydrogenibium sp. YO3AOP1
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