5TKM,5W3V,6X91


Conserved Protein Domain Family
NAD1

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pfam18778: NAD1 
Novel AID APOBEC clade 1
A distinct family of AID/APOBEC-like deaminases found in ray-finned fishes, the coelacanth, amphibians, lizards, and marsupials.
Statistics
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PSSM-Id: 465865
Aligned: 36 rows
Threshold Bit Score: 132.402
Created: 27-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5TKM_A        17 ERMDRDTFYDNFENEPIL---SGRSYTWLCYEVKikRGRSNLLWdT--G-VF-RGqvyfKPQy-HAEMCF--LSWFc-gN 85 
OCT92600       7 KLVSFEDFNGNFNNIG------QVHKTLACFNLG----NETPLW-KhwG-FAyNNp---NSD--HAEQII--LQELytfL 67 
XP_003765824   7 KEISEEEFYEHFCNIK------TPHQTLLCFSLKe---DDKTLW-KlwG-HA-YN----NPGqyHAEILV--LREIe-dY 67 
XP_007501436   7 KEISEEEFHRNFSSTK------ASHQTLLCFGLKe---EDKTLW-KlwG-HA-YN----NPGqcHAEILV--LREIe-nY 67 
XP_006025452  50 VEFHKA-FGFPYGQMT------PQNKHIIFYELR----NSSSML-VqkG-HA-TNcie---yniHPESVLfeLGGYl-dS 111
XP_003999306  45 YSEFYQIFGFPYGPAY------PQTKHLTFYELK----TSSGSL-VqkG-HA-SSctg---nntHPESMLfeMNGYl-dS 107
XP_024204018  28 RRIEPWEFDVFYDPRE------LRKEACLLYEIKw--gMSRKIW-RssGkNT-TN---------HVEVNF--IKKFt-sE 85 
P38483        16 RRIEPHEFEVFFDPRE------LRKETCLLYEINw--gGRHSIW-R----HT-SQn---TNK--HVEVNF--IEKFt-tE 73  Norway rat
5W3V_A         4 ALLTAKTFSLQFNNKRRVnkpYYPRKALLCYQLT--PQNGSTPT-R--G-HL-INk---KED--HAEIRF--INEIk-sM 68 
6X91_A       373 RRIEPWEFDVFYDPRE------LRKEACLLYEIK--WGASSKIW-R--S----SGk---NTTn-HVAVNF--IKKFt-sE 430
5TKM_A        86 QL---PADK---CFQITWFVSWTPC---PDC-VAKLAEFLSEHPN-VTLTISAARLYYYS-ER-----DYRRALCRLSQ- 147
OCT92600      68 GL---DQSNislKYKLNLYTSYSPC---FSC-CKDLCSFLDTYKNqVSMHLKIAKLYKFY-DS-----NNQRGLQMLRE- 133
XP_003765824  68 LM---ANILnatKYTITWFLSYSPC----HCcCDEITNFLMKFQIkIEFNIKAARPYYFDnDK------NQKGLKILKK- 133
XP_007501436  68 LMtniPNAA---KYNITWFLSYSPC---HSC-CDKIINFFMNSQTkIEFNIKAAKPYQFSnDQ------NPKGIKMLNK- 133
XP_006025452 112 VTy--RYDS---IGYIILYSNYSPCneaDHCcISKIYNFLTKYPD-IILCIYFSQLYHTE-DDfpvsaWNREALRSLASl 184
XP_003999306 108 AIr--NNNA---IRHIILYSSNSPCneaDHCcISKMYNFLIMYPD-VTLSIYFSQLYHTE-PEfpasaWNREALRSLASl 180
XP_024204018  86 RHf--HPSI---SCSITWFLSWSPC---WEC-SQAIREFLSQHPG-VTLVIYVARLFWHMdQQ------NRQGLRDLVN- 148
P38483        74 RYf--CPNT---RCSITWFLSWSPC---GEC-SRAITEFLSRYPH-VTLFIYIARLYHHA-DP-----RNRQGLRDLIS- 136 Norway rat
5W3V_A        69 GL---DETQ---CYQVTCYLTWSPC---PSC-AGELVDFIKAHRH-LNLRIFASRLYYHW-HP-----NYQEGLLLLCG- 130
6X91_A       431 RDf--HPST---SCSITWFLSWSPC---WEC-SQAIREFLSRHPG-VTLVIYVARLFAHM-DQ-----QNRQGLRDLVN- 493
5TKM_A       148 AG-ARVKIMDYEEFAYCWENFVDNEGQQ-FMPWYK--FDE---NYAFLHRTLKEIL 196
OCT92600     134 NG-ADITIMDLEDYKECFYLFVSPTd-T-FQPCPD--LN----HYSYGNARDMDLL 180
XP_003765824 134 LG-VLIKMMDFTDYEECLYLFVDPC-MK-FTAWPD--LEV---QSIANKMIFHHLF 181
XP_007501436 134 LG-ILFKMMEYSDFEECFYLFVDPC-TK-FTAWPD--LEA----QSIANITLSHHL 180
XP_006025452 185 WPhMTLHPLCGR----MWHSLLC----N-FVSN----IPE---ATFYYPVLPARAL 224
XP_003999306 181 WPqVILSPISGS----IWHSLLNNF-----------------------VSGISGST 209
XP_024204018 149 SG-VTIQIMRASEYYHCWRNFVNYLPGD-EAHWPQypPLW----MMLYALELHCII 198
P38483       137 SG-VTIQIMTEQESGYCWRNFVNYSPSN-EAHWPRypHLW----VRLYVLELYCII 186 Norway rat
5W3V_A       131 SQ-VPVEVMGLPEFTDCWENFVDHKEPPsFNPSEK--LKEldkNSQAIKRRLERIK 183
6X91_A       494 SG-VTIQIMRDSEYYHCWRNFVNYPPGD-EAHWPQy-PPA---WMMLYALELHCII 543
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