3J2I


Conserved Protein Domain Family
crvDNA_42K

?
TIGR00495: crvDNA_42K 
Click on image for an interactive view with Cn3D
42K curved DNA binding protein
Proteins identified by this model have been identified in a number of species as a nuclear (but not nucleolar) protein with a cell cycle dependence. Various names given to members of this family have included cell cycle protein p38-2G4, DNA-binding protein GBP16, and proliferation-associated protein 1. This protein is closely related to methionine aminopeptidase, a cobolt-binding protein. [Unknown function, General]
Statistics
?
PSSM-Id: 273105
Aligned: 5 rows
Threshold Bit Score: 552.572
Created: 7-Oct-2014
Updated: 25-Oct-2021
Structure
?
Program:
Drawing:
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
3J2I_A     1 MSGEDEQQEQ----TIAEDLVVTKYKMGGDIANRVLRSLVEASSSGVSVLSLCEKGDAMIMEETGKIFKK-EKEMKKGIA 75  human
AAB18127   1 MSSDDERDEKe--lSLTSPEVVTKYKSAAEIVNKALQVVLAECKPKAKIVDICEKGDSFIKEQTASMYKNsKKKIERGVA 78  thale cress
Q09184     1 MSTKEATSETavdySLSNPETVNKYKIAGEVSQNVIKKVVELCQPGAKIYDICVRGDELLNEAIKKVYRT--KDAYKGIA 78  Schizosaccharomyces...
AAB03665   1 -EIKEEAPVAi--eDLSNPVVVDSYNAAGIIANNAIKHVISKCVVGALVVDICQYGDDFIEAEAAKTFTK-RKNLEKGIA 76  Dictyostelium disco...
P50580     1 MSGEDEQQEQ----TIAEDLVVTKYKMGGDIANRVLRSLVEASSSGVSVLSLCEKGDAMIMEETGKIFKK-EKEMKKGIA 75  house mouse
3J2I_A    76 FPTSISVNNCVCHFSPLKSDQd--YILKEGDLVKIDLGVHVDGFIANVAHTFVVdvAqGTQVTGRKADVIKAAHLCAEAA 153 human
AAB18127  79 FPTCISVNNTVGHFSPLASDE---SVLEDGDMVKIDMGCHIDGFIALVGHTHVL--Q-EGPLSGRKADVIAAANTAADVA 152 thale cress
Q09184    79 FPTAVSPNDMAAHLSPLKSDPeanLALKSGDVVKILLGAHIDGFASLVATTTVVs---EEPVTGPAADVIAAASAALKAA 155 Schizosaccharomyces...
AAB03665  77 FPTCVSVNNCVGHFSPLKGNT---RTLKQGDVVKIDLGCHIDGYIAVGAHTIIIgnTsAESMTGKVADAICAAHYALEAA 153 Dictyostelium disco...
P50580    76 FPTSISVNNCVCHFSPLKSDQd--YILKEGDLVKIDLGVHVDGFIANVAHTFVIgvAqGTQVTGRKADVIKAAHLCAEAA 153 house mouse
3J2I_A   154 LRLVKPGNQNTQVTEAWNKVAHSFNCTPIEGMLSHQLKQHVIDGEKTIIQNPTDQqkKDHEKAEFEVHEVYAVDVLVSSG 233 human
AAB18127 153 LRLVRPGKKNTDVTEAIQKVAAAYDCKIVEGVLSHQLKQHVIDGNKVVLSVSSPE--TTVDEVEFEENEVYAIDIVASTG 230 thale cress
Q09184   156 QRTIKPGNTNWQVTDIVDKIATSYGCKPVAGMLSHQQEREVIDGKKQVILNPSDSqrSEMDTFTFEEGEVYGVDILVSTS 235 Schizosaccharomyces...
AAB03665 154 LRMIRPGKTSNEVTQVIEKISDMYGVTSVSGILSHELKRFIIDGEKVIFSKNEPS--QKIQTYEFQENEVYCIDIVMSTG 231 Dictyostelium disco...
P50580   154 LRLVKPGNQNTQVTEAWNKVAHSFNCTPIEGMLSHQLKQHVIDGEKTIIQNPTDQqkKDHEKAEFEVHEVYAVDVLVSSG 233 house mouse
3J2I_A   234 -EGKAKDAGQR-TTIYKRDPSKQYGLKMKTSRAFFSEVERRFDAMPFTLRAFEdEKKARMGVVECAKHELLQPFNVLYEK 311 human
AAB18127 231 -DGKPKLLDEKqTTIYKKDESVNYQLKMKASRFIISEIKQNFPRMPFTARSLE-EKRARLGLVECVNHGHLQPYPVLYEK 308 thale cress
Q09184   236 pSGKVKRSDIA-TRIYKKT-DTTYMLKLQASRKVYSEIQTKFGPFPFSTRNISfDSRTNMGLNECTSHKLLFPYEVLLDK 313 Schizosaccharomyces...
AAB03665 232 -EGKAREEADR-PTIYRRNLDSTYKLKSKASRDFKDQIVKRYSALPFPLRNFD-EKVSKLGLVELVEHQVLAAYPVLFDR 308 Dictyostelium disco...
P50580   234 -EGKAKDAGQR-TTIYKRDPSKQYGLKMKTSRAFFSEVERRFDAMPFTLRAFEdEKKARMGVVECAKHELLQPFNVLYEK 311 house mouse
3J2I_A   312 EGEFVAQFKFTVLLMPNGPMRITSGPFEpDLYKSEMEvqDAELKALLQSSASRKTQ---KKKKKKASktaeNATSGETLE 388 human
AAB18127 309 PGDFVAQIKFTVLLMPNGSDRITSHTLQ-ELPKKTIE--DPEIKGWLALGIKKKKGggkKKKAQKAGekgeASTEAEPMD 385 thale cress
Q09184   314 DGGIVAEFYSTIALTKKGTIILSDSEPKeDFIKSDKKveDPEIVALLETPIKVTKN---KKKSKKPS----KANE----- 381 Schizosaccharomyces...
AAB03665 309 SGCEVVQFKTTVLVLPNGNHKLIGTEFPlPFVRSEFSvtDDAIKALIASPLKIN-----KKAAKKAS----ATTTDVKMQ 379 Dictyostelium disco...
P50580   312 EGEFVAQFKFTVLLMPNGPMRITSGPFEpDLYKSEMEvqDAELKALLQSSASRKTQ---KKKKKKASktveNATSGETLE 388 house mouse
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap