Conserved Protein Domain Family
PRK06930

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PRK06930: PRK06930 
positive control sigma-like factor; Validated
Statistics
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PSSM-Id: 180757
Aligned: 20 rows
Threshold Bit Score: 194.948
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
30263679    1 MQDLIKQYNTTLRQLREAQKDAKE-----------EDVK-------------VLTDMISDITYSLEWMKKARRPGNRRGV 56 
16078321    1 MQDLLFEYKRTLKQTRIQYKPLAEadesvlsaeelKDKK-------------IIRNMITDLEYVTEWLEKGRQPGIRRAI 67 
52079725    1 MEDLLFEYKRALKNTKKLYKPYQDeqglt--aeqlNDKK-------------LIRNMMTDLEYVIDWLENGREPGIRRAI 65 
52785094    1 MEDLLFEYKRALKNTKKLYKPYQDeqglt--aeqlNDKK-------------LIRNMMTDLEYVIDWLENGREPGIRRAI 65 
16801460    1 MQELINEYRGALQEVNEVKANLQTkidakkrppqaAGQKrtiqevpekaimsKLNSIIRSLEYSIEWMELGHEPAPRRAI 80 
138896469   1 MNDLVQEYKKSLKMARKMYDNAVE-----------EDKK-------------IIAGMISDLEFAIEWMEPSR-PGNRRGI 55 
157693526   1 MQDLLIEYKRALKDARKRYEPFREkedkqlsdqekHDKK-------------IIASMVSDLEYVVEWLQIGRQPGARRGL 67 
154685691   1 MEDLLFEYKRTLKETKKWYKQLEEadetvltseelKDKK-------------IIRTIITDVEYVIEWLEKGRQPGIRRAI 67 
154687094   1 MQDLIIEYKNALKDVKKTYRQLSQvadslltaeqkSDKK-------------ISGGMISDLEYTIEWLQNGRQPGARRGA 67 
212638503   1 MDELLREYKQTLKDTKKLLERAPE-----------QDKT-------------IIRQIIVDLEFVIEWLTTGRHPGHKRGI 56 
30263679   57 ERLAAYQRERACDPLLMQRYFRSMDDnLyEWDNHQQEHSIGEWDKVRLEDALSLLTEREKEVYLMSRGYCLTYREIARYL 136
16078321   68 DRRDVYQRLMIKDPRIIESFSSAM--------MFEPDGQVSEEDRDRIREALALLTDREKEMFLLHKVECFSYERIADLL 139
52079725   66 DRRDSYKRMLLKDPRIIDTFSEQS--------AFEPAQEVSAYDKARIESALSALTAREKEIFILHKVEQFSYERIAAML 137
52785094   66 DRRDSYKRMLLKDPRIIDTFSEQS--------AFEPAQEVSAYDKARIESALSALTAREKEIFILHKVEQFSYERIAAML 137
16801460   81 HRRSGLQREVCVTDIETMRQWFVYEHgI-AYDFEDNEPKISEWDKIRMEDAMSTMSTQEKKVFLLKHEKNLSYSQISDEM 159
138896469  56 ERRATYQREKPFDPLLIQKFFRSSEP-VyEWDDHERESVITSWDRQRIEDALSALTAREHEVYLMSRGYGLTYSKTATTF 134
157693526  68 DRRSVYQRTILANPEVLEALSHEYTI------IQENEREFSERDKKRIDEALSVLTDREKDVFFMHTTQGLSFSEIAVML 141
154685691  68 DRRDAYQRMLIKDPRIIETYSQAL--------MFEPSANVTEEDRIRLRDALAVLTDREKEMLLLHKAECFSYERIAALL 139
154687094  68 DRRDVYKRTILSDPRLIDALPEEYAI------IQEPDGEVSDWDRERIEDALSVLTDREKDIFIMHAVQNLSFEEIAALL 141
212638503  57 ERRAAYQREKPFDPLLMQKYFRSTEP-TyEWDDHEKESVITSWDRERIEDALSVLTEREREVYLMSRGYCLTYSEIANYL 135
30263679  137 DITCSTVQSMIERAEKKIARQVNESLFCNC 166
16078321  140 GVKKSTVQTTIKRASLKMQRQQEEMNRSLA 169
52079725  138 GIKKSTVQTNVKRAQLKIAKQIEKPLDCMA 167
52785094  138 GIKKSTVQTNVKRAQLKIAKQIEKPLDCMA 167
16801460  160 EISVRSVRSYLHRGEEKIQNQIDGSLFCMA 189
138896469 135 VYHPVAFKP--------------------- 143
157693526 142 DVKKGTVQKHMERARTKMSKKVQERLFEAA 171
154685691 140 NVKKSTVQTTVKRALLKIQKQQEQRNQSPA 169
154687094 142 NIKKGTVQKNIERSRLKMINRANASLFCLA 171
212638503 136 CISSSSVQTMIERAERKIKKRIKESLFCMC 165
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