1JOP


Conserved Protein Domain Family
DUF386

?
pfam04074: DUF386 
YhcH/YjgK/YiaL
This family consists of bacterial proteins. YjgK (TabA) influences biofilm formation by toxin-antitoxin systems. Another member of this family, YhcH, is a possible sugar isomerase of sialic acid catabolism.
Statistics
?
PSSM-Id: 461158
Aligned: 203 rows
Threshold Bit Score: 79.9285
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
1JOP_B          1 M-IISSLTNPNF--KvgLP--KVIAEVCDYLNTLDlNALENG----RHDI-NDQIYMNVMEPETAEPSSKKAELHHEYLD 70  Haemophilus in...
Q6LQD9          1 mvVLENLEQFKT--L--YRdgRKWNRCVEAI-----ENIGNIrdgvYHSI-GDSLAYMIEDGVAKNSE--HFIGNRRYFD 68  Photobacterium...
Q5E0N0          1 MiILDNLEQFKV--V--YRdgRKWNRCVEAI-----ENIGNLrdgiMYSI-GDSLVYMIEDGIAKNTE--TFVGNRRYFD 68  Aliivibrio fis...
Q87M54          1 miVLDSLEQFKQ--V--YRngRKWNRCVEAI-----GNIGSIkdgvMHSI-GDSLVYMVEDGIAKQTE--TFIGNRRYFD 68  Vibrio parahae...
P0AC73          1 MrIIDNLEQFRQ--I--YAsgKKWQRCVEAI-----ENIDNIqpgvAHSI-GDSLTYRVETDSATDA---LFTGHRRYFE 67  Escherichia co...
tigr:AHA_0206 129 mitLDNLTLFKN--I--YRegKKWGRCVEAI-----NNLANLkpgiCHSI-GDSLTYRLQEGASPATS--LFEGQRRYFD 196
CDC94717        1 M-YFDNLNNLTPnmI--SHftDGIKKCLTYAKKNDlSSFDCG----HYEIdGDNVYLNIAEFETAPVETKGWEAHRKFLD 73 
WP_002842533    1 M-IFGNVKNLSE--Y--SYleDQIKECFDYYKNNDlKSFEKG----SHEIdGQRLFVNIVEYTTTKPENRFWEAHKNYLD 71  Peptostreptoco...
WP_021870872    1 M-IFGNMDHVEE--F--PYleKGIKECFEYAKTHDlASFEKG----SHEIdGDRLFVNIVEYTTTTPEERFWEAHKKYLD 71  Clostridium sp...
CDD06929        1 M-IFGNIQNLEE--Y--PFleEQIKECFAYAREHElVSYEKG----SHEIdGDRLFVNVVEYTTTTAEERFWEAHRQYLD 71 
1JOP_B         71 VQVLIRGTENIevgATYPNLSKy--eDYNEADD---YQLCaDIDDKFTVTMKPKMFAVFYPYEPHKPccvvnG-----KT 140 Haemophilus in...
Q6LQD9         69 VHYYLEGQETI---EANHKQQLdvvmPYQDETDreyLAGS-----GTLQTVGQGQVVILDNNNAYRFi----------GD 130 Photobacterium...
Q5E0N0         69 IHYYLEGRETV---EVASKSELesvqAYSDETDrehLNGN-----GQKHQLCEGQVAVFDNTKAYKFh----------GD 130 Aliivibrio fis...
Q87M54         69 VHYYLEGQETV---EFADKTALtleqTYRDETDrefFSGQ-----GEIRELCEGQVAIFENSEAYRFh----------GD 130 Vibrio parahae...
P0AC73         68 VHYYLQGQQKI---EYAPKETLqvveYYRDETDreyLKGC-----GETVEVHEGQIVICDIHEAYRFi----------CN 129 Escherichia co...
tigr:AHA_0206 197 VHYYLEGEETV---EWAAKSDLrveqGYDDTTDrewLVGE----VRERQQVGNGQVVIFENDEAYRFv----------GD 259
CDC94717       74 IHLILRGTEQI---DVNFTPNMkpldYLE-AND---FATF-FGTLNGTVILKENDFLICYPTDAHRPgia------peNP 139
WP_002842533   72 LHLMLDGCEQI---DLNFINNMklgeFVE-KDD---FLPM-EGPKNSSVVLRDGDFLICYPADAHMTava------vdEP 137 Peptostreptoco...
WP_021870872   72 VHVMLRGTEQI---DLNFIQNMklneFVE-KDD---FLPM-DGNKNSSVVLTDGDFLICYPNDGHRT-----AvqagdKP 138 Clostridium sp...
CDD06929       72 LHLMLRGTEQI---DLNFIQNMdvkeFVE-KDD---FLPM-DGEKNSSVILRDGDFLICYPSDGHRTava------vdGP 137
1JOP_B        141 EKIKKLVVKVP 151 Haemophilus influenzae
Q6LQD9        131 KRVRKVVLKVT 141 Photobacterium profundum
Q5E0N0        131 NRVRKVVLKVT 141 Aliivibrio fischeri ES114
Q87M54        131 NRVRKVVLKVT 141 Vibrio parahaemolyticus
P0AC73        130 NAVKKVVLKVT 140 Escherichia coli K-12
tigr:AHA_0206 260 APVRKLIIKVT 270
CDC94717      140 EMIKKAVFKIA 150
WP_002842533  138 QKIKKAIFKIQ 148 Peptostreptococcus anaerobius
WP_021870872  139 ETIKKAIFKVR 149 Clostridium sp. AM32-2
CDD06929      138 ETIKKAIFKIR 148
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap