Conserved Protein Domain Family
NuoD

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COG0649: NuoD 
NADH:ubiquinone oxidoreductase 49 kD subunit (chain D) [Energy production and conversion]
NADH:ubiquinone oxidoreductase 49 kD subunit (chain D) is part of the Pathway/BioSystem: NADH dehydrogenase
Statistics
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PSSM-Id: 440414
Aligned: 480 rows
Threshold Bit Score: 377.488
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_005220211   1 MP-EIRNYTINFGPQHPSAHGVLRLVLELDGEVIQRADPHVGLLHRATEKLAESKPYNQSIGYMDRLDYVSMMCNEHGYV 79 
EHR76023       1 ----MAQMWITMGPQHPMTHGLWTLRVKVDGETVVDTEAELGYIHRGVEKICESRDFTQVTPYCDRLCYVSAMTWANSYI 76 
WP_048058875   1 mAgKGRLVEIYFGPQHPGAPGNIAFKLTLDGERVVNVETIPGFLHRGFEKMMENRTWEMNVVLSYRFCVEDPDPLEIAYA 80 
WP_013129890   1 -MgDREYQVVYFGPQHPGAPGNIAYKLWLDGDRVVKAEVIPGFLHRGFEKMMENRTWEMNVAMSYRFCVEDPDHLEIAYS 79 
WP_013142484   1 -msKARVLTVFLGPQHPGAPGNVGFKLLLDGERVLDIDLIPGFLHRGFEKMMEYRRWDMDLVLSARVCVEDPDHVELTYT 79 
WP_014737282   1 ---mAGRYMLYFGPQHPGAPGNVGFRLEMEGERVVRAELIPGFLHRGFEKMMENRKWENSYVLSYRFCVEDPDPFEVAYA 77 
WP_015281281   1 ---MTDTIKIFHGPQHPGVTGNMSLELDLDGETIVAAKTHVGYLHRGFEKLIERRTVIQAFTIVCRICVPEPDPNEENFA 77 
WP_082085497  23 DLtSGKYLKLWQGPNHPGITGNMSVELTVCGDEVVEGRTHVGYLHRGFEKLMERRTFIQCFPIVCRICVPEPDFNEYCYA 102
WP_057953716  27 DLqSQKHTKLWQGPNHPGVTGNMSLELTLSGDEIVDAKTHVGYLHRGFEKLMERRTYMQCFPLSIRMCVPEADSNEYVLS 106
WP_006928800  36 DLkSGKYLKIWHGPQHPGVTGNMALELTLQGDVVVECKTHVGYLHRGFEKLMERRKFIQCFPIVCRICVPEPDYNEYLFA 115
WP_005220211  80 RAIEQLLGVEVPERAQYIRTMYDEITRILNHLMWLAAHALDIGAMSVFLYCFREREDLFDCYEAVSGARMHATYYRPGGV 159
EHR76023      77 YAAEDLLEADVPERAEYIRLISAEIQRLASHLMWLGAFGPDIGNLTLMTWCMRDREMFLDLLQELGGSRMHYNYPRIGGV 156
WP_048058875  81 MAVEKIHGVEIPENAKYIRMIQAEFSRIASHLFWSHFIGGSTGLRTPAYWALVAREEILKWFARFAGHRVYHNISVPGGV 160
WP_013129890  80 LAVEDIYRVEIPENAKWLRMIQAEMGRIASHLFWSHFIGGSVGLRTPAYWAVVAREEILKWFARVSGHRVYHNFSVPGGI 159
WP_013142484  80 HAMEQIFGIEPPEKAKYVRVIVAEFSRLANHLLWMMHFAGPIAARYATSWAIAAREEILKWFDYVAGHRVYHHYIFPGGI 159
WP_014737282  78 EALDMVFKVDPPPKAKYFRMIQAEFSRIASHMFWTHFMLGSVGLRTPAYWALAAREEILKWFAWVTGHRIYHNFSVPGGI 157
WP_015281281  78 RGVEELLGLEISERAKYIRVMVLELARLQAHYLWLAGQGGSIGHGVVPQWAVGERDYILDLFEELTGGRVYHMYIYPGGV 157
WP_082085497 103 AAVEELAGIEVPEQAHWIRTLILEMGRINSYMMYLGGQAGAFGLGVIGQWTTYARDLMLDRFEELTGARIYHMFILPGGV 182
WP_057953716 107 TCVEELAGIEIPEAAKWLRTLALEMARLQVLLRVVPGIGATLSLGLGSQWGMYMREQILDRFEELTGGRIYHMYMLPGGV 186
WP_006928800 116 AAVEELAGIQVPERGQWIRALVLEMIRLASLTMGLGGQAGAFGLSPIGQWGVAHRDFILDLFEELTGGRIYHMYIVPGGV 195
WP_005220211 160 NRDLP-ErmpqfdkagskwhgakemtrrnanrqgSLLDFLEDFTERFPKHVDEYETLLTDNRIWKQRTVGIGVVSPERAQ 238
EHR76023     157 KRDMP-I---------------------------GFADRVIAKTKLFEKRLDEYEMMLDESTIWLVRLQGVGYANAEEMV 208
WP_048058875 161 RYPLP-K---------------------------SFVEDTLRLTNFVEEKVRDVEAALLKNNIFRDRTRGVGRLSSKEAL 212
WP_013129890 160 RYAVP-E---------------------------NFKEDTMRVVDFVEEKALDVEEAFLGNNVFKARLKGVGKLTGEEAL 211
WP_013142484 160 RWNIP-S---------------------------DFKEKTLKVLKVIKPLIDDLRDGFFYHPIFEKRARDMGRLKPGDAI 211
WP_014737282 158 RSDVP-Q---------------------------DFQSRTLDLTYRVEDLVKDVEKAALGNRVFKRRTRGIGVVKGETAL 209
WP_015281281 158 KRDLP-A---------------------------GFLERLCDLVDDLERRLPEYDRIFFDNTAVKKRLQGVGVVDPDEAL 209
WP_082085497 183 RDTLP-E---------------------------GFDQRMAETLKEIERTMKDVHDVMFHNAVFKKRSVGVGYIDPALID 234
WP_057953716 187 RGHLP-D---------------------------GFKKRMEQNLKDIEQFVANIEDLIFTNSVFKKRTVGRGIIKPEWVS 238
WP_006928800 196 RQDFPdD---------------------------GFPGRVEEVLQKLEKLILDIERVMFNNAVFKSRARGLGKIPADWIE 248
WP_005220211 239 ALGFTGPMLRGSGIAWDLRKKQPYAAYDKVDFDIPI-----GVNGDCYDRYLVRMEEMRQSNRIIRQCIDWL-R-AnpG- 310
EHR76023     209 NAGVSGPNVRAAGVNYDVRWAHPYSVYDEIDWEPAVekptsVKGADCYDRYRVRMEEMRQSCSMILDALNKI-P-G--Gm 284
WP_048058875 213 ELGVTGPVLRAAGLPYDLRKVTPYLNYDKIQFEVPI-----VQNGDAYDRSVLRFREIYESLKIIRESVKRIdP-E--G- 283
WP_013129890 212 NLGVTGPVLRASGVKYDLRLKAPYLNYDKVKFEVPV-----TNSGDSYDRAVVRFKEIHESLSIIKQALEEFkP-G--E- 282
WP_013142484 212 RLGATGPTLRGSGVKFDLRKALKYDAYGEIDFEIPT-----GEYGDSYDRALVRLREMYISMEIIRQAVEKM-PtE--G- 282
WP_014737282 210 RLGATGPVVRGGGLAYDVRKLAPYERYDSVNFEVPV-----GEVGDAYDRALVRFREVHESLKIIRQATMEVrP-G--G- 280
WP_015281281 210 RHGYAGPVIRACGLPRDVRRDAPYLVYDQLEFDIPT-----ETAGDAYARALVRRAEMYQSLRILRQVAERM-PaD--G- 280
WP_082085497 235 SYGITGPNARAAGVVKDLRKDAPYLVYPMLNFEPVS-----GTDSDIFTRADVRRRDVLVSIDLIRQILGRM-PrT--G- 305
WP_057953716 239 QYGIVGPNARGAGFKRDVRKDYPYLKYSELNFDPYV-----GKDSDIYTRAQVRKHDLLMTVDLIRQILDKV-PtS--G- 309
WP_006928800 249 PFGITGTTARAAGVAIDVRKDNPYLIYDQLDFEIIL-----GTESDVYERTLLRKEEILNSINLIRQILKKM-PrT--G- 319
WP_005220211 311 ---------PVRIDDAkviAPsrermkedmealihhfklfseGYCTPPG-EVYAAVEAPKGEFGCYIVS--------DGA 372
EHR76023     285 ntnyasgdeMIFTKAP---------------------------TRAPEGaTGFSNYECTRGASQFYIQG--------GGD 329
WP_048058875 284 ---------GLRVKLP---------------------------LTAPPG-EGIARVESARGEYMIHIIS--------TGG 318
WP_013129890 283 ---------PLRVKLG---------------------------LTAPIG-EGVARVESARGEYMIHIVS--------QGG 317
WP_013142484 283 ---------PYRYRLP---------------------------AAIPTG-EGIGRVESARGEFLAHILQrppgahrySKP 325
WP_014737282 281 ---------PYRVKIP---------------------------LTAPPG-RGYARVESARGEYTVHVTS--------VGG 315
WP_015281281 281 ---------PIQCKLP---SHr--------------------KLKLPKA-ETYVQSESARGAFGYFMAG--------DGS 319
WP_082085497 306 ---------PTMSKLP---NVl--------------------HWNIPRG-ETYIKGECSRGEYGFYLVT--------DGS 344
WP_057953716 310 ---------DLRAKTP---NVl--------------------HWEIPKG-ETYVRSESSRGEYGMYMVS--------DGS 348
WP_006928800 320 ---------PVRVKLP---NVl--------------------HWKVPAG-ETYVRAETGRGEMGYYLVS--------DGS 358
WP_005220211 373 ---NKPYRLKIRAPGFPH-LAALDEMSRG--HMIADVVAIIGTLDIVFGEIDR 419
EHR76023     330 grgKNPYRLSIRSPMFIT-IPFVAKTMIG--YKIADIPAIMGSFDPCIGETDR 379
WP_048058875 319 ---RKPYRVRLKSMSLPLmTTVVEYIVKRdeVTIADFPILLASLDPCAPDIDR 368
WP_013129890 318 ---RKPYRVRLRSMSMPLlTTVVDHIISKeeVTIADFPVILASLDPCAPDLDR 367
WP_013142484 326 ---LNPYRIKFRGPTMAHlTTVLKHIVHNeeITVADLPVLIGSFDPCAPDIDR 375
WP_014737282 316 ---RSPYRVRFKSPSMPLlTTVLDYIIKNeeVTIADLPVILASLDPCAPDIDR 365
WP_015281281 320 ---ERLRRLQVRGPSLVHaFTLLEPLLIG--AQLADVALIMVSLTTCPPEIER 367
WP_082085497 345 ---GYPRRVNVRGPSYTHaMALLERMIVN--LNISDVAGLMVSLHTYPPEIER 392
WP_057953716 349 ---KYPRRVNLRGPSYTHaVALLEKMLIN--ANISDVHAIMVSLQTCPPEIER 396
WP_006928800 359 ---EYPRRVHVRGASYTHaMALLEQLAVG--LSIADVAGLMVSLQTCPPEIER 406
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