Conserved Protein Domain Family
RseC_MucC

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pfam04246: RseC_MucC 
Positive regulator of sigma(E), RseC/MucC
This bacterial family of integral membrane proteins represents a positive regulator of the sigma(E) transcription factor, namely RseC/MucC. The sigma(E) transcription factor is up-regulated by cell envelope protein misfolding, and regulates the expression of genes that are collectively termed ECF (devoted to Extra-Cellular Functions). In Pseudomonas aeruginosa, de-repression of sigma(E) is associated with the alginate-overproducing phenotype characteriztic of chronic respiratory tract colonization in cystic fibrosis patients. The mechanism by which RseC/MucC positively regulates the sigma(E) transcription factor is unknown. RseC is also thought to have a role in thiamine biosynthesis in Salmonella typhimurium. In addition, this family also includes an N-terminal part of RnfF, a Rhodobacter capsulatus protein, of unknown function, that is essential for nitrogen fixation. This protein also contains an ApbE domain pfam02424, which is itself involved in thiamine biosynthesis.
Statistics
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PSSM-Id: 461236
Aligned: 161 rows
Threshold Bit Score: 38.7128
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_052199358    12 EGDIALLHTEGQSACGSCQANSTCgtglla---klfptRARQPLRLPI------DhLarrplpGQRVVLGIDEDYLQRNT 82  endosymbiont ...
jgi:Dret_1803   14 EGNMATVKLPKPQACGSCGGEGSCcs----------glTASGDVTVRAtnepgaR-L------GEVVDVLLVQESSSKAV 76 
jgi:Deba_1740   11 RGGMAMVETIQTEACSQCSSRGACqm-----------mGGERMRVVPAineagaK-E------GQRVIIAARRSTVMGAG 72 
Q3A3J1          13 GCHVAMVLCRKSTFCAGCAAMGLChv-----------gDDGRSMLVEThnvlgaV-V------GDKVRLASRAGQFLLAS 74  Pelobacter ca...
WP_015947361    12 YGKKVRVKSHRNECCDHCEARDGCrv-----------mGGGKDMFFEVenslnaQ-M------GDQVKVRVSDKAFLKAI 73  Desulfatibaci...
WP_012175928    12 SGTSAWIRTQRAAACEHCQSKDSCkt-----------mGGGNDMEVEAanrveaR-T------GDRVVVSFATASLIKAT 73  Desulfosudis ...
CCK79189        12 DKSTAWITTTRSGACEACASRESCga-----------gDNKKEITVTVkntldvK-K------GDHVIIGLETKPILFLT 73 
WP_004073285    12 TPETAWIKTTRSAACESCASKDSCgv----------shHPSEEMTIILpntlgvE-E------GDHVIVGIHSAPMLFLS 74  Desulfobacter...
WP_014150063    12 EHNQVWVESKPKQGCGGCLQKSSCstsv--------ldkfIKKRSIAVdcdielK-T------GDEVVIGISEGILIKAS 76  Methylotuvimi...
jgi:Metme_3095  12 ADGEVWIKSLQSGACGGCAQHSSCgtatlskwlpkrefAVESDRPLKV---------------GDQVRVGLDDSHVLLSS 76 
WP_052199358    83 LLLYAVPLLGLLGGAILGDLSSagdtagGGSELAAIFGGLFGLTAAIFWVRWRSHCATARLAHSVRILR 151 endosymbiont of unidenti...
jgi:Dret_1803   77 SILYLFPLAAMVLGAILGSWLHp----lGDPEISAVVLSLVCLGAAFGLIGWRSSR-TRDREIPPRIIS 140
jgi:Deba_1740   73 FLVYMVPVMALIGGAVVGKAYGpd--ygFEPQSAAVLLGVGLLAACWLAISRFSKRMAGNKNLAVRVIR 139
Q3A3J1          75 FLLYVVPLLALIGGAVLGEIIGafytlrIDPNLLAAIFGLSFLVGSFFIIR-IGSRAIPRGTFMPEIIE 142 Pelobacter carbinolicus ...
WP_015947361    74 FLVYVIPMIAFIGGAFWGNTLGep--lgMDPSATAALAAFGLMGVVFAVVRVIGNRLGQKAGYKPRMVc 140 Desulfatibacillum alipha...
WP_012175928    74 FLIYMFPILCLMAGAGIGVRLSqtvfpsVDQSVLSAVIGFGAFVLAVVFVRIRGNRMAKEDQYKPVIIR 142 Desulfosudis oleivorans
CCK79189        74 FLLYVFPIILLTIGAVIGNSLApy--fqMNPSLVSMISGFFFFGLSFYFIRKKNNSLANREEYKPFLVR 140
WP_004073285    75 FFLYVFPIILLIIGALIGDALApv--leMSSSALSMGFGFLLFAVAFLIIRKKQAGMSKKDKYKPFLVR 141 Desulfobacter postgatei
WP_014150063    77 LLLYMLPLVVMVLSGAVAEAFLps--gyEHGDLVIAGTAISALLLSLWAISKLQQSFFYTFFSRPVVIR 143 Methylotuvimicrobium alc...
jgi:Metme_3095  77 IVLYLLPILVMLLGVGLANTFLp----pAFCEAWLPELSLSLLLATFWGIHKLQNVLLLYFCFRPQIVG 141
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