Conserved Protein Domain Family
gyrB

?
PRK14939: gyrB 
DNA gyrase subunit B; Provisional
Statistics
?
PSSM-Id: 237860
Aligned: 504 rows
Threshold Bit Score: 1166.02
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
225874303  18 AQKTTYTSDNIKVLEGLEAVRLRPAMYIGSTGE-MGLHHLVYEVVDNSVDEALAGYATRIEVTIHVDNSITVVDDGRGIP 96 
148244172   7 QNSQEYKASSIKVLRGLDAVRKRPGMYIGDTDDgTGLHHMVFEVVDNAIDESLAGYCSKINIIIHEDKSVSINDNGRGIP 86 
148555711   9 PNANSYGADSIKVLKGLDAVRKRPGMYIGDTDDgSGLHHMVFEVSDNAIDEALAGHCDRIVITLNPDGSVSVEDNGRGIP 88 
56552479    5 KQHDDYDAGSIKVLRGLDAVRKRPGMYIGDTDDgSGLHHMVFEVSDNAIDEALAGYCDLVKIAIYDDGSVSVEDNGRGIP 84 
260753854   5 KQHDDYDAGSIKVLRGLDAVRKRPGMYIGDTDDgSGLHHMVFEVSDNAIDEALAGYCDLVKIAIYDDGSVSVEDNGRGIP 84 
294010033   9 pnsNAYGADSIKVLKGLDAVRKRPGMYIGDTDDgSGLHHMVFEVSDNAIDEALAGHCDRILITLNPDGSVSVEDNGRGIP 88 
85375173   17 RQNGEYGADSIKVLKGLDAVRKRPGMYIGDTDDgSGLHHMVFEVSDNAIDEALAGHCDLVLIELNPDGSVSVEDNGRGIP 96 
87201322    9 PNTNSYGADSIKVLKGLDAVRKRPGMYIGDTDDgSGLHHMVFEVSDNAIDEALAGHCDLVLIELNPDGSVSVEDNGRGIP 88 
88608222    1 MSNTDYTADSIKVLKGLEAVRKRPGMYIGDTDDgSGLHQMVYEVVDNSVDESLAGYCTAIEVVIDVDGSISVEDNGRGMP 80 
103488449  17 PNANAYGADSIKVLKGLDAVRKRPGMYIGDTDDgSGLHHMVFEVSDNAIDEALAGHCDLILITLNSDGSVSVEDNGRGIP 96 
225874303  97 VDektLDNGEKMPAVQVVLTKLHAGGKFDS----STYKVSGGLHGVGVSCVNALSEEFDVEIWRDGHTWEQDYARGIPIS 172
148244172  87 ID---IHPEEGISAAEVIMTILHAGGKFDN----NSYKVSGGLHGVGISVVNALSEWVKLTVYRNNKIYYQHYNKGVPEK 159
148555711  89 TG---IHAEEGVSAAEVIMTQLHAGGKFDNtndaNAYKVSGGLHGVGVSVVNALSDVLDLTIWRDGEEHYMRFQRGDAVA 165
56552479   85 TG---IHPEEGVSAAEVIMTQLHAGGKFDNnansNAYKVSGGLHGVGVSVVNALSDYLELTVWRDGQEHRMRFEHGVAVE 161
260753854  85 TG---IHPEEGVSAAEVIMTQLHAGGKFDNnansNAYKVSGGLHGVGVSVVNALSDYLELTVWRDGQEHRMRFEHGVAVE 161
294010033  89 TD---IHKEEGVSAAEVIMTQLHAGGKFENtsddNAYKVSGGLHGVGVSVVNALSEYLDLNIWRDGKEHYMRFAYGDAVA 165
85375173   97 VD---MHKEEGVSAAEVIMTQLHAGGKFENtsddNAYKVSGGLHGVGVSVVNALSEWLELVIWRDGKEHYMRFEHGEAVK 173
87201322   89 TD---IHAEEGVSAAEVIMTQLHAGGKFENtsddNAYKVSGGLHGVGVSVVNALSEWLELTIWRDGKEHWMRFAHGDAEG 165
88608222   81 TD---MHG-EGVSAAEVIMTQLHAGGKFDQ----SSYKVSGGLHGVGVSVVNALSDWLKLTIYRDGKVHFAEFENGETVR 152
103488449  97 TD---IHAEEGVSAAEVIMTQLHAGGKFENtsddNAYKVSGGLHGVGVSVVNALSEWLELTIWRDGQEHWMRFEHGDAVA 173
225874303 173 KLRQAGT--S---KK--------RGTKVHFLPDKSIF--------TVTEYNYDTLAQRLRELAFLNKGLEIVLVDERTaD 231
148244172 160 PIQVIGK--S---NK--------TGTIIHFKPNINIF--------SNTEFNYDILANRIRELSFLNSGVHIGIEEFST-E 217
148555711 166 PLKVVGP--An--GK--------KGTKVTFLPSPETF--------KITEFDFDKLEHRYRELAFLNSGVRLFLADERHaE 225
56552479  162 PLQVVGA--S---DK--------RGTRVRFHPSAETF--------KITEFNFEKLEHRYRELAFLNSGVRLQLTDKRTdP 220
260753854 162 PLQVVGA--S---DK--------RGTRVRFHPSAETF--------KITEFNFEKLEHRYRELAFLNSGVRLQLTDKRTdP 220
294010033 166 PLKVIGD--Ap--EGk-------KGTKVTFLPSTEKVpgdggtfkNHTEFDFEKLEHRYRELAFLNSGVRLFLADARHeE 234
85375173  174 SLEVTGD--AprvDQnpddngfkKGTRVTFMASHDTFk-------NVTDFDFEKLEHRYRELAFLNSGVRILLRDKRHeD 244
87201322  166 PLVVRGPapE---GK--------KGTRVTFQASHETFk-------NVLEFDFDKLEHRYRELAFLNSGVRILLRDKRHeE 227
88608222  153 SLSVTGEc-G---DK--------TGTLVHFLPSRSTFk-------NTTEVSFSTLENRFRELSFLNPGLRISLLDMRKgS 213
103488449 174 PLRVNGP--Ap-aGK--------KGTRVTFQASTDTFk-------NVTEFDFEKLEHRYRELAFLNSGVRIKLVDARHaE 235
225874303 232 pktgqpKRNDFKY-AGGIAEFIKHINKGKQIL--HDKPIVMEGLRDNVDMEIALQYNDSYSETVFCFANNINTADGGTHL 308
148244172 218 ------KKDIFKY-KGGIKSFIKHLNKTKTPI--HNDIIEINTQREKIKIVVALQWSDSYQQSIYCFTNNIPQRNGGSHL 288
148555711 226 r-----KEIELFY-EGGIAAFVKYLDRTKVAL--MPDPVAIMGQRDDVGIDVALEWNDSYYEQVLCFTNNIPQRDGGTHL 297
56552479  221 e-----KTVELFY-EGGIAAFVKWLDRAKTALipEPVAIH--GDRDDVMIDVALEWNDSYYEQVLCFTNNIPQRDGGTHL 292
260753854 221 e-----KTVELFY-EGGIAAFVKWLDRAKTALipEPVAIH--GDRDDVMIDVALEWNDSYYEQVLCFTNNIPQRDGGTHL 292
294010033 235 k-----KEIELFY-EGGIAAFVKWLDRNKQPL--MPDPIAISGSRDDVTIDVALEWNDSYYENVLCFTNNIPQRDGGTHL 306
85375173  245 v-----REHDMFY-EGGIAAFVKYLDRNKQPL--VAEPISVSAEKDGIGIDVALQWNDSYYENVLTFTNNIPQRDGGTHL 316
87201322  228 i-----KEHDLFY-EGGIAAFVKYLDRNKQPL--MPEPVAISANRDGIGIDVALEWNDSYYENVLCFTNNIPQRDGGTHL 299
88608222  214 s-----TGKVVFFsSGGTEEFVAYLDRSKQPI--HSTPIRVVGGVDSIAIDVSMQWNDSYYENVLCFTNNIKQKDGGTHL 286
103488449 236 h-----VSHDLFY-EGGIAAFVKYLDRNKTPL--LPDPIAISSERDGIGIDVALEWNDSYYENVLCFTNNIPQRDGGTHL 307
225874303 309 SGFKTALTRTINSAGQQLGLFKDVKENLSGDDVREGLVAVISVKLPQPQFEGQTKGKL-NSDIAGTVQALVNEKLGMFLE 387
148244172 289 AGFRGGLTRTVNNYIDNSDIAKKEKNSITGEDTREGLTAIINIKIPDPKFSSQTKDKLvSSEVRAPIESIINDKLNDYFL 368
148555711 298 AAFRAALTRTLNNYAEKSGALKKEKVSLTGDDMREGLTAIVSVKLPDPKFSSQTKDKLvSSEVRQPLESLMADKLAEWLE 377
56552479  293 AAFRAALTRTLNNYADKSGLLKKEKVQLTGDDMREGLTAIISVKLPDPKFSSQTKDKLvSSEVRQPLESLMADKMAEWLE 372
260753854 293 AAFRAALTRTLNNYADKSGLLKKEKVQLTGDDMREGLTAIISVKLPDPKFSSQTKDKLvSSEVRQPLESLMADKMAEWLE 372
294010033 307 AAFRAALTRTLNNYADKSGLLKKEKVSLTGEDMREGLTAIVSVKLPDPKFSSQTKDKLvSSEVRQPLESLMADKMAEWLE 386
85375173  317 AAFRSALTRTLNNYATASGLLKKEKVSLSGEDMREGLTAIVSVKLPDPKFGSQTKDKLvSSEVRQPLESLMGEKMGEWLE 396
87201322  300 AAFRAALTRTLNGYAERSGMLKKEKVSLTGDDMREGLTAIVSVKLPDPKFSSQTKDKLvSSEVRQPLESLMADKMVEWLE 379
88608222  287 AALRSAMTRVMHNYIVKENLIKKDKVVVSGEDVREGLSAILSVKLPDPKFSSQTKEKLiSSEVKPVIEKIVSDALASWLE 366
103488449 308 AAFRAALTRTLNGYGEKSGLLKKEKVSLTGEDMREGLTAIVSVKLPDPKFSSQTKDKLvSSEVRQPLESLMADRMTEWLE 387
225874303 388 QNPPVAKRIINKAIEAARAREAARKARDLTRRKGALDGGGLPGKLADCSERQPDRCELYLVEGESAGGTAKQGRDRRFQA 467
148244172 369 ENPKEAKIIIKKILDASRARNAARKAREITRRKGLFDISSLPGKLSDCQTKNPVESEIFLVEGDSAGGSAKQGRNRRTQA 448
148555711 378 ENPAHARSIIQKVIDAAAAREAARKARELTRRKGVMDIASLPGKLADCQERDPSKCELFLVEGDSAGGSAKQGRDRVYQA 457
56552479  373 ENPAHAKVIIQKIIDAAAAREAAKRARELTRRKGVMDIASLPGKLADCQERDPTKSEIFIVEGDSAGGSAKQGRNRHNQA 452
260753854 373 ENPAHAKVIIQKIIDAAAAREAAKRARELTRRKGVMDIASLPGKLADCQERDPTKSEIFIVEGDSAGGSAKQGRNRHNQA 452
294010033 387 ENPQHGRMIVQKVIDAAAAREAAKKARELTRRKGVMDIASLPGKLADCQERDPAKSELFLVEGDSAGGSAKQGRNRHNQA 466
85375173  397 ENPNDAKAIVQKIIDAAAAREAARKAREMSR-KGAMSVASLPGKLADCQERDPAKSELFLVEGDSAGGSAKQGRDRKTQA 475
87201322  380 ENPGHAKSIIQKVIDAAAAREAAKRARELTRRKGAMDIASLPGKLADCQERDPAKCELFLVEGDSAGGSAKQGRDRKTQA 459
88608222  367 ENPSSARVIARKVVESALAREAAKKARDLTRRKGGLEITTLPGKLADCQEKSPELSELLIVEGDSAGGSAKQGRDRKTQA 446
103488449 388 ENPAYAKAVIQKVVDAAAAREAAKKARELTRRKGAMDIASLPGKLADCQERDPAKCELFLVEGDSAGGSAKQGRDRHVQA 467
225874303 468 ILPLKGKILNVEKARYDKMLGHEEIRAMITALGCGIGKEDFDPAKLRYGRIILMTDADVDGSHIRTLLLTFFFRHMTELI 547
148244172 449 ILPLKGKILNVEKSRFEKILSSAEVGTLITALGCGIGKEEYNLNKLRYHKIVIMTDADVDGAHIRTLLLTFFYRYLPELI 528
148555711 458 ILPLKGKILNVERARFDRMLSSKEVGTLIQAMGTGIGRDDFNLEKLRYHKIVIMTDADVDGAHIRTLLLTFFYRHMKPII 537
56552479  453 ILPLKGKILNTERSRLDRMLSSKEVGTLIQALGTGI-RDEFNIAKLRYHKIVIMTDADVDGAHIRTLLLTFFYRHMPEII 531
260753854 453 ILPLKGKILNTERSRLDRMLSSKEVGTLIQALGTGIR-DEFNIAKLRYHKIVIMTDADVDGAHIRTLLLTFFYRHMPEII 531
294010033 467 ILPLKGKILNVERARFDRMLSSKEVGTLIQAMGTGI-RDDFNLEKLRYHKIVIMTDADVDGAHIRTLLLTFFYRQMPQII 545
85375173  476 ILPLKGKILNVERARFDRIISSKEVGTLIQAMGTGLR-DEFNLEKLRYHKIVIMTDADVDGAHIRTLLLTFFHRQMPEIV 554
87201322  460 ILPLKGKILNVERARFDRIISSKEVGTLIQAMGTGL-RDEFNLEKLRYHKIVIMTDADVDGAHIRTLLLTFFHRQMPEII 538
88608222  447 VLPLRGKILNVEKTRFHKVIGSAEIGNLIAALGTSIGEEEFNIDKIRYHKIIIMTDADVDGLHIRTLLLTFFFRYARPIV 526
103488449 468 ILPLKGKILNVERARFDRIISSKEVGTLIQALGTGIR-DEFNIEKLRYHKIVIMTDADVDGAHIRTLLLTFFYRQMPEII 546
225874303 548 KRGHVYIAQPPLFKIKKGKFEQYIKDEREFVRVMVKRASDGMVVRYG-AtSATLEGAALTKFMGQLNEYLGFFDKVNKRL 626
148244172 529 ENGYLYIARPPLYKIKKGKQERYLKNDQELNDYLLQEGINNSYLFVSkK-TPPISGIELEFLIKEYYKINKIFDKLSKHY 607
148555711 538 ENGHLYIAQPPLYKVAKGRSEVYLKDDAALDEYLVTGGLGAMMLETP-S-GA-RSGDDLRVLVEHARRMRSLMRFVPKRY 614
56552479  532 ENGHLYIAQPPLFKVAKNRSEVYLKDEAALDNYLMDAGVASMMLHTD-N-GD-RSGNDLHQMVEHARRTRLLMNYVPNRY 608
260753854 532 ENGHLYIAQPPLFKVAKNRSEVYLKDEAALDNYLMDAGVASMMLHT--D-NGDRSGNDLHQMVEHARRTRLLMNYVPNRY 608
294010033 546 EAGHLYIAQPPLYKATRGRSEVYLKNEAALENYLVDNGVESMALETT-G-GM-RSGEDLRSLIEHGRRIRAVMRYVPRRY 622
85375173  555 KAGHLFIAQPPLYKVSKGRSEVYLKDDRELDRYLISGGLQGRVLDS--G-GTQRSGAELQTLVDHALRVRNLIGFAPRKY 631
87201322  539 KAGHLFIAQPPLYKVAKGRSEVYLKDNAAMDRYLVEAGLSGRVLETS-G-GA-RSGTDLEALVEHALRMRNLMAFVPRRY 615
88608222  527 ERGYLYIAQTPLYKVMRKGADVYLRDDAALEEYLLDRIVKGKELEGA-N-GNVYTGQSLKRVVQQCLVLSKILEKFDYRI 604
103488449 547 EKGHLYIAQPPLYKVAKGRSEVYLKDDSALENYLVDGGIDALMLET--T-GGARSGADLRGLIEHGRRLRALMRYVPRGH 623
225874303 627 RNDEVTGMFArLFAHEGKEPAKRADFEgpadaapAklvelhaelekiqrnyqfkalhqpafdeehqtwslsfvdaqgser 706
148244172 608 NLNLLKAI---SNSKPIDDLTNHKNMN-------Twctnltknlnknltlekthkvif-nkntneveytlyvygvnidht 676
148555711 615 DPVIVEALAL-TGALDPESGD--EGHR-------Asaravaawmgridpeaawsgd----laedggyhlqrlwrgvtdhh 680
56552479  609 YAPLIETAAL-AGAFQSDIAD--EKRQ-------Dilkqvaeiltrsdsesdarwsv---efipegflfrrlwrgvtdah 675
260753854 609 YAPLIETAAL-AGAFQSDIADEKRqdilkqvaeiltrsdsesdarws------------vefipegflfrrlwrgvtdah 675
294010033 623 NPAIIEALAI-NGALDPELSH--DAQA-------Erlantvrwmdaqddegrwsgr----iaeeggfhferlwrgvtdhh 688
85375173  632 NAAIIEAMAL-AGVFDPANRASAEALeraaerlqlgdpeaewsarr---------------tddggvafervwrgvtdah 695
87201322  616 NPAIIEALAL-AGALEPDMTV--EARD-------Aallraadwlnrgdtearwtvt----laeeggyhvqrmwrgvtdhh 681
88608222  605 PLEILEVVFLcGEEADPHLLAERVALI-------Sfgawtvvredssl--------------------ffertfqglrnr 657
103488449 624 NYGLVEALAL-NGALDPALDSAGRTAAavr--aaEwlnaaeraltggaeakwtit------aagggytlekrwrgvsdhh 694
225874303 707 rIDWTLASSPETRQML----------SKFALIREQlep--------pfVveyASKaTAaqteAeeseaeasd--eaeask 766
148244172 677 iLNSVFFNSFDYQSIK----------EFSKKIENV-------------I---TQE-SY----V----------------- 708
148555711 681 lIDPAFLRSAEARKLH----------ALAAEQAES-------------Y----ARsAR----Lvplrsaaaptgddedep 729
56552479  676 tLDWNFIQSSEAAKLH----------QLAQEQAES-------------Yi--STHpAR----Lvtlaaqm---------- 716
260753854 676 tLDWNFIQSSEAAKLH----------QLAQEQAES-------------Yi--SAHpAR----L----------------- 709
294010033 689 mIEAGFIGSAEARKLH----------AIAAEEADS-------------Y----RTsSR----Lvtakaaaaaeeagedel 737
85375173  696 lIEPKFLESAEARKLHsvaaeeaesyEVAARLKKL-----------------SSGeTT---------------------- 736
87201322  682 mIEAGFLVSAEARKLA----------KLAAENAEVyagmar-lvrataAaseADAaPAadddG----------------- 733
88608222  658 yEYSPLFVPEDLEKMA----------KIREAISDI-------------F---YPGfAR----F----------------- 690
103488449 695 aIDAAFLASQEARRLH----------TLAAEQAETyahparlvkgssaAalaADAaALaateA----------------- 747
225874303 767 paqKR-----GA------RSaaePVTKQtPQELFDYVVEQGKRDYQVQRYKGLGEMTSSQLWETTMDPERRTLLSVKLED 835
148244172 709 ---KN-----IN------KK---IRVQY-FSHVVEFLMNNARKGQSFQRYKGLGEMNPKQLWETTMDPEQRTLFKVKIED 770
148555711 730 ivdTR-----GT-----------A-VHQ-PSNLLDAVLAAGRKGMSIQRYKGLGEMNAEQLWETTLDPANRAMLKVEVAQ 791
56552479  717 ------------------deeagqdIYR-PSQLFEAILAVGSKGLSISRYKGLGEMNPEQLWETTLDPANRSMLKVEVEQ 777
260753854 710 ---VTlaaqmDEea--------gQDIYR-PSQLFEAILAVGSKGLSISRYKGLGEMNPEQLWETTLDPANRSMLKVEVEQ 777
294010033 738 pvaTK-----GS-----------ATVTR-PSELLEAILTAGRKGLAIQRYKGLGEMNAEQLWETTLDPDNRSMLRVEVEQ 800
85375173  737 ---APdpesaDEtdadtpSFtddDAITR-PTELLDAVLAAGRKGLSIARYKGLGEMNAEQLWETTLDPEARILLQVKVED 812
87201322  734 ---EVpaaptVQh---------kDAITR-PSELLEMVFAGGRKGLSIQRYKGLGEMNAEQLWETTLDPDNRSLLQVKVED 800
88608222  691 ---NN------------------GEYHS-ILAFIRDADSVARAGMVLQRFKGLGEMNPEQLWSTTLDPSNRTIFKVTIEE 748
103488449 748 ---AEddaeaSDgdlpaaTArkvTPITR-PSELLEAIFAHSRKGLAISRYKGLGEMNAEQLWETTLDPSNRSLLRVEAEQ 823
225874303 836 IAETETIFTTLMGEDVEARRKFIEDNALDVKNLDI 870
148244172 771 SIISDEVFSTLMGDAVEPRRNFIEDNALSVNNLDF 805
148555711 792 ADVADEIFTRLMGDVVEPRREFIQENALSVANLDV 826
56552479  778 ADVADEIFSRLMGDVVEPRRDFIQQNALSVANLDV 812
260753854 778 ADVADEIFSRLMGDVVEPRRDFIQQNALSVANLDV 812
294010033 801 ADVADEIFTRLMGDVVEPRREFIQDNALNVANLDV 835
85375173  813 ADVTDEIFTRLMGDVVEPRREFIQDNALNVANLDV 847
87201322  801 ADVTDEIFTRLMGDVVEPRRDFIQENALNVANLDV 835
88608222  749 AAVADQMCSMLMGDAVGPRRDFIVNNALNASNIDV 783
103488449 824 ADIAHEIFERLMGDEVEPRRDFIQTNALSVANLDV 858
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap