Conserved Protein Domain Family
Lacto_palin_RPT

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NF040509: Lacto_palin_RPT 
translation of Lactobacillus palindromic repeat
This model was built for AntiFam to prevent false prediction of DNA repeat translations as proteins related to WP_020751851.1
Statistics
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PSSM-Id: 468516
Aligned: 74 rows
Threshold Bit Score: -1
Created: 24-Apr-2023
Updated: 4-May-2023
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_005715402  14 ITRSPAQKPACKDLGRNGQTRAITPKAAYTPVSNRAGSRS 53  Lactobacillus rhamnosus
WP_014566518   4 ETRSQAQKPAHKDLDRNGQTRAITFKATYTPVSNRACSRS 43  Lactobacillus casei
WP_016386088   3 ETRSQAQKPACKDLERNSQTHAITFKAAYIPVSKRACSRS 42  Lacticaseibacillus
WP_003658737  29 ETRSPTQKPAHKDLERNGQGPAITFKAAYAPVSKRVGSRS 68  Lactobacillus paracasei
WP_015764443  21 ETRSQGQKPAHKDLGRNGQSPAITSKAAYAPVSKRPCSRS 60  Lactobacillus rhamnosus
WP_005689006   3 ITRSLAQKSACKDLSRNGQDRAITSKATYTPTSKRAGSRS 42  Lactobacillus rhamnosus
WP_005713452   7 ITRSQGQKPACKDLRRNGQSPTITPEATYTPVSKRPCSRS 46  Lacticaseibacillus rhamnosus
WP_016363870   2 ETRSQSQKPPCRDLRRNDQSPAITPEATYIPVSKRSCSRF 41  Lactobacillaceae
WP_005715940  19 ITRSQAQKSACKDLRRNGQSPAITSEATYTPVSKRPCSRS 58  Lactobacillus rhamnosus
WP_005716721   3 ITRSQGQKPACKDLRRNGQTRAITSKDAYTPVSNRPCSRS 42  Lactobacillaceae
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