Conserved Protein Domain Family
TCP

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pfam03634: TCP 
TCP family transcription factor
This is a family of TCP plant transcription factors. TCP proteins were named after the first characterized members (TB1, CYC and PCFs) and they are involved in multiple developmental control pathways. This region contains a DNA binding basic-Helix-Loop-Helix (bHLP) structure.
Statistics
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PSSM-Id: 460998
Aligned: 45 rows
Threshold Bit Score: 135.552
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q67WL3        57 TSTKDRHTKVDGRGRRIRMPAICAARVFQLTRELGHKTDGETIEWLLQQAEPAVIAATGtgtiPANFTSLNISLRSS-GS 135 Japanese rice
XP_010320553  88 TTTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGtgtiPANYSSLNISLRSSrHH 167
XP_006363220  83 TTTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGtgtiPANYSSLNISLRSSrHH 162
EFH52114     109 ASTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAATGtgtiPANFTSLNISLRSS-GS 187
Q93Z00       115 ASTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAATGtgtiPANFTSLNISLRSS-GS 193 thale cress
Q53PH2       150 RPTKDRHTKVEGRGRRIRMPALCAARVFQLTRELGHKTDGETIEWLLQQAEPAIVAATGtgtiPANFSSLAVSLRSAaSH 229 Japanese rice
RID44879      53 RSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAIVAATGtgtiPANFSSLSVSLRSS-GS 131
XP_004965036  62 TSTKDRHTKVDGRGRRIRMPAICAARVFQLTRELGHKTDGETIEWLLQQAEPAVIAATGtgtiPANFTSLNISLRSS-GS 140
BAK00816      57 TTSKDRHTKVDGRGRRIRMPAICAARVFQLTRELGHKTDGETIEWLLQQAEPAVIAATGtgtiPANFTSLNISLRSS-GS 135
ADM87266      94 TSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGtgtiPANFTSLNISLRSS-GS 172
Q67WL3       136 SLSipshlrlaglagprfgg------garaadawdrvvglgfgGAADAPssatsss------ssplllSFHSG------- 196 Japanese rice
XP_010320553 168 SASnylahnhnnfghv------------------------------------------yhdrnyfngvglFSSennsffp 205
XP_006363220 163 SASnylahnninnfgh-----------------------------------------vyhdrnyfngvglFSSennsffp 201
EFH52114     188 SMSlpshfrsaastfspnnmfs---pamlqqqqqrggggfhhpHLQGRAttsslfpgidnftpttsflNFHNP------- 257
Q93Z00       194 SMSlpshfrsaastfspnnifspamlqqqqqqqrgggvgfhhpHLQGRAptsslfpgidnftpttsflNFHNP------- 266 thale cress
Q53PH2       230 SSSpraapfhhlqqq-------------------------------------------qqhdvaamlgfhHHHhqllppp 266 Japanese rice
RID44879     132 TLSappsksvplygalglthh------------------------------qyeeqggafgahtppllGFHHHlqqhqq- 180
XP_004965036 141 SFSipahlrapglpgtrfg---------gargdpwdrvvglgfgGAEGPpsatssa------ssplllSFHSG------- 198
BAK00816     136 MLStipahlraaglpgsrfg------ggpradawdrfvglgfgGGLESPastttss------ssplllSFHSG------- 196
ADM87266     173 SMSvpsqlrssyfnpnfslsqrr--------------------------slfqgiglssdrsatttllNFQTGnsnlhqf 226
Q67WL3       197 -------SVGLDV-SPPSASTSPAAADLSRKRRWEQEMQQQQQYQ 233 Japanese rice
XP_010320553 206 sgnlnmlQAKEELcDDHDDNDNDNDNNTGRIKRRSEDQDLLQNNY 250
XP_006363220 202 sgnlnmlQAKEELcDD-DDDDNDNNNNTGRIKRRSEDQDLLQNNY 245
EFH52114     258 -----------------------------TKQEGDQDSEELNSEK 273
Q93Z00       267 -----------------------------TKQEGDQDSEELNSEK 282 thale cress
Q53PH2       267 pphqhpePTPQD----------PGAGEFMRKRYREADDLFKDTSR 301 Japanese rice
RID44879     181 --qqhhqQAPAETiPG------PDGESFSRKRYRSVDSSKEDGEG 217
XP_004965036 199 -------SVGLDV--SPSSSSAAASSDLSRKRRWEQEMQQQQQQQ 234
BAK00816     197 -------SVGLDV--SPSSSAAAASTELSRKRRWEQEMQQQQQQh 232
ADM87266     227 qakqemrDNSLDL------TETSIEESLSRKRRQDLDLQQEQQQN 265
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