2FUG


Conserved Protein Domain Family
nuoB_fam

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TIGR01957: nuoB_fam 
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NADH-quinone oxidoreductase, B subunit
This model describes the B chain of complexes that resemble NADH-quinone oxidoreductases. The electron acceptor is a quinone, ubiquinone, in mitochondria and most bacteria, including Escherichia coli, where the recommended gene symbol is nuoB. The quinone is plastoquinone in Synechocystis (where the chain is designated K) and in chloroplast, where NADH may be replaced by NADPH. In the methanogenic archaeal genus Methanosarcina, NADH is replaced by F420H2. [Energy metabolism, Electron transport]
Statistics
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PSSM-Id: 273896
Aligned: 15 rows
Threshold Bit Score: 269.222
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2FUG_6        18 GILFTTL----EKLVA----WGRSNSLWPATFGLACCAIEMMASTDARNDLARFGsEVFRAsPRQADVMIVAGRLSKKMA 89  Thermus thermop...
P19050        35 NVILTTV----DDLYN----WAKLSSLWPLLYGTACCFIEFAALIGSRFDFDRFGlVPRSS-PRQADLIITAGTITMKMA 105 Synechocystis s...
P57253        36 NIFMGKI----TQLLHklvnWGRKNSLWPYNFGLSCCYVEMVSAFTSVHDVARFGsEVLRAsPRQADVMVIAGTPFIKMA 111 Buchnera aphidi...
P56897        11 SVLFTTA----DSIIS----WSRRSALWPETFGIACCAIEMISAGCARYDLDRFG-VVFRPsPRQSDVMIIAGTVTRKFA 81  Sinorhizobium m...
WP_002215610  10 GFITTSA----DTVLN----YMRTGSLWPVTFGLACCAVEMMHAGMARYDLDRFG-IIFRPsPRQADLMIVAGTLTNKMA 80  Neisseria
WP_006279574  18 GFLVTKFgdltDYVMN----WARSGSLWPMTFGLACCAVEMMHTASSRYDLDRYG-IMFRAsPRQSDVMIVAGTLTNKMA 92  Wolbachia
WP_010901380  10 GVVTTTL----DQALE----WARSNSLWPLTFGLACCAIEMMAIQASDMDISRFGsEIFRNsPRQSDLMIVSGTVTKKMA 81  Thermoplasma ac...
WP_011034408  34 FLKKTKA----QDIIN----WGRKNSLWFMTQPMGCCGVEMIATGCAHYDTDRFG-IIPRNsPRHADVMIISGYVTKKYL 104 Methanosarcina ...
WP_010932449  12 NVLVTSV----DNVMN----WARLSSLWPMGFGLACCAIEMMATNASNYDLERFGiF-PRSsPRQSDLMIVAGTVTMKMA 82  Chlorobaculum t...
WP_000524416  17 MVQLGNV----ESVIQ----WGRSYSLWPYPFATACCGIEYMSTACSDYDIARFGaERPSFsPRQADMILVLGTITYKMA 88  Leptospira
2FUG_6        90 PVMRRVWEQMPDPKWVISMGACASSGGMFNn--YAIVQNVDSVVPVDVYVPGCPPRPEALIYAVMQLQKKVRGQ 161 Thermus thermophilus ...
P19050       106 PALVRLYEEMPEPKYVIAMGACTITGGMFSsdsTTAVRGVDKLIPVDVYIPGCPPRPEAIFDAIIKLRKKVANE 179 Synechocystis sp. PCC...
P57253       112 PVIQRLYDQMLEPKWVISMGACANSGGMYd--iYSVVQGVDKFLPVDIYIPGCPPRPEAYMQALILLQKLINEE 183 Buchnera aphidicola s...
P56897        82 PVVRRLYDQMPEPRWVIAMGTCAISGG-VYn-tYAVVQGSETFVPVDVHVPGCPPRPEALMHGFLLLQEKIKKS 153 Sinorhizobium melilot...
WP_002215610  81 PALRRVYDQLAEPRWVLSMGSCANGGGYYHy-sYSVVRGADRVVPVDVYVPGCPPTAEALIYGLIQLQQKIKRT 153 Neisseria
WP_006279574  93 AALRKVYDQMADPKYVISMGSCANGGGYYHy-sYSVVRGCDRIVPVDVYVPGCPPTAEALLYGMLCLQNKIKRT 165 Wolbachia
WP_010901380  82 PRVRRIYDEMPYPKYVIAQGVCVIQGGPYNq-gYSVVLGVDRVVPVDVYIPGCPPTPEALTNGIILLQKKIRGE 154 Thermoplasma acidophilum
WP_011034408 105 PALKRLWDQMPAPKWVIAMGDCAISGGPFYe-sYSTVQNIDEIFPIDVYIPGCPPRPEALIQGFVELQEKIKAR 177 Methanosarcina mazei
WP_010932449  83 ERVVTLYEQMPEPRYVLSMGSCSNSGGPYWhhgYHVLKGVDRIIPVDVYVPGCPPRPEALIGGLMKIQELIRME 156 Chlorobaculum tepidum
WP_000524416  89 PVLRQIYDQMAEPKFVISVGACASSGGMFHt--YGVLQGVDRILPVDVYVPGCPPRPEAILDALLKLQTKLKTQ 160 Leptospira
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