Conserved Protein Domain Family
DUF5588

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pfam17826: DUF5588 
Family of unknown function (DUF5588)
This is a family of unknown function found in chordata.
Statistics
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PSSM-Id: 465524
Aligned: 6 rows
Threshold Bit Score: 621.555
Created: 26-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_001497644   6 WWPGGEFEDSVFEERRERRPGPPAPYRAKCCEPQWFYEETGSSDDVEALTVQKFRGDLAYRRQEYQKALQEYSSISEKLP 85 
XP_006086393   6 WLLGGEFEDSVFEERRERRPGPPASYRAKLCEPQWFYGETESSDDVEALTIRKFRGDLAYRRQEYQKALQEYSSISEKLP 85 
XP_005316243   6 WI-GGEFEDSVFEEGPQRRPGSPAPYRAKRCEPQWFYEETESSDDVEVLTIKKFKGDLAYRRQEYQKALQEYSSISEKLS 84 
Q9D2X8         6 WVLGGEFEDSVFEQRPERRPEPPSPYRAKLCEPQWFYEETECSDDIEVLTLKKFRGDLAYRRQEYEKALQEYSSISEQLP 85  house mouse
XP_008254098  35 WLFGCEFEDSVFEERPERRPGPPVSYCAKRCEPQWFCEETESSDDVEALTTKKFKGDLAYRQGEYQKALQEYSSIAEKLS 114
XP_003408222   6 WLFGGEFEDSVFEEGRERRAGPPASYCAKCCEPQWFYEETGSNDDVEALTIKKFKGDLAYRRQEYQKALQEYSSVSEKLS 85  African savanna...
XP_001497644  86 STNFAVKRDVQEGRARCLVHLGRHVEALEIAADLENKATNTDHLTTVLYLQFAICSSLQNLEKTIFCLQKLISLHPFNPW 165
XP_006086393  86 STNVSMKRDVQEGQARCLAHLGRHAEALAIAANLEMKATNTDHLTTVLCLQLAICSSSQDVQRTTFCLQKLVSLHPFSPW 165
XP_005316243  85 STNFAMKRDVQEGQARCLAHLGRHMEALEIAANLENKATNTDHLTTVLYLQLAICSGLQNLEKTIFCLQKLISLHPFNPW 164
Q9D2X8        86 STNFAMKRDVQEGQARCLAHLGRHEEALEMAADLESKATNTDHLTVVLHLHLAVFSSLQSREHTILCLHKLIALHPLNPW 165 house mouse
XP_008254098 115 PTNFSMKRDIQEGQARCLAHLGRHQEALEIATELENKATNTDHLTTVLYLQFAICSSLQNLEKTIFCLQKLISLHPFNPW 194
XP_003408222  86 FSSFAMKRDVQEGQARCLTHLGRHAEALQIAANLENKATNTDHLTTVLYLQFAICSSLQNLEKTIVCLQKLISLHPFNPW 165 African savanna...
XP_001497644 166 NWGKLAEAYLNLGPALSASCASSQKQNNFTSSDKTIKSSFPHWGKHHLLCFPDTLPENSLFPMEASSSDNQKKEKALK-- 243
XP_006086393 166 TWGRLAEAYLAAGPALSASAASSHRQSHSTSRDKAVTSACPHSGKDCCLCFPETLPESSVCSVETSSSKSRKKEEALK-- 243
XP_005316243 165 SWGKLAEAYLNLGPALSASIASSQRQNNFTSSNKTVLSSFPHSRKDCILCFPETVPESSVLSVEASVRNGQKIEKAFK-- 242
Q9D2X8       166 SWCKLAEAYLSPGPGLPAG-VSPQGQKSSASSDKAVGPSSVHSGTGSLLSLPTTLPENALLSVEASGS-AQENMPSLA-- 241 house mouse
XP_008254098 195 NWGKLAEAYLSLGPALSTSLASAQKQNSFTSSDEPVKSSSPHSGRGCLLCLPETLPASSVFPVEARSSHSRENEDALK-- 272
XP_003408222 166 NWGKLAEAYLNLGPALS---ASSQKRNSCTSSDKTIKSSSLHSEKDCLLCFPETLPGSPRFSVDTSGSDSQQNEKALKst 242 African savanna...
XP_001497644 244 -----NvqictaeKREAVLLENQMKACASFIRTRLLLQLAQAQQASFALERNLRTQQEIEDKVKGFSFKEDALLLIAEVM 318
XP_006086393 244 -----N-------FRDSLSLEARMKACASFIRTRLLLQLTRSQQTSFALERNLRTQQEIEDKMKGFGFKEDTVQLMTEVM 311
XP_005316243 243 -----NsqncvtgKGEAVLIETQMKACASLIRTRLLLQFTQSQQTSFALEKNLRTQQEIEDKMKSFSFKEDTLLWIAEVM 317
Q9D2X8       242 -----R-------RREEAQMEARRKACASLLRARLLLQLAQSQQTSFALEKNLRTQQEIAGKVKDFNFREDTLLLMEEAM 309 house mouse
XP_008254098 273 -----SirhcvagESDEALPETRMKACASFIRTRLLLQLTQSQQTSFALEKNLRTQQEIEDRVKGFGFKDDTLLLIAEVM 347
XP_003408222 243 hncmsE-------KRGALLRQTQIKACAAFVRTRLLLQLTQSQQTSFALERNLKTQQEIEDKMKGFCFKEESLLLISEVM 315 African savanna...
XP_001497644 319 GEDIIPEKLKDEVCTEVKCVGPAALSALVIASSEEFEDKWFRKIRDHLHAFENQFH 374
XP_006086393 312 GEDIVPEKIKDEVHSEVKCVGPAALAALVIASSEEFEDKWFRKIKDHFCSFENQFH 367
XP_005316243 318 GEDIVQEKIKEEVHSEVKNIGSAALTALVTASSKEFEDKWFRKIKDHFCPFENQFH 373
Q9D2X8       310 GEDIVPEKIKEELHSEVKCVGPGALTAMVVASSKEFEDKWFRKIKDHFCPLGNQFH 365 house mouse
XP_008254098 348 GEDIVPEKIKDEVHSEVKSVGHAALAALVTASSQEFEERWFRRIRDHFWPFGNQLG 403
XP_003408222 316 GEDIVPEKIKDEVHTEVRCVGSAALTASVIASSEEFEDKWFKKIKDHFCSIENQFQ 371 African savanna elephant
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