1IRU


Conserved Protein Domain Family
proteasome_beta_type_7

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cd03763: proteasome_beta_type_7 
Click on image for an interactive view with Cn3D
proteasome beta type-7 subunit. The 20S proteasome, multisubunit proteolytic complex, is the central enzyme of nonlysosomal protein degradation in both the cytosol and nucleus. It is composed of 28 subunits arranged as four homoheptameric rings that stack on top of one another forming an elongated alpha-beta-beta-alpha cylinder with a central cavity. The proteasome alpha and beta subunits are members of the N-terminal nucleophile (Ntn)-hydrolase superfamily. Their N-terminal threonine residues are exposed as a nucleophile in peptide bond hydrolysis. Mammals have 7 alpha and 7 beta proteasome subunits while archaea have one of each.
Statistics
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PSSM-Id: 239732
Aligned: 43 rows
Threshold Bit Score: 274.074
Created: 26-Apr-2006
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
active sitebeta subunit
Conserved site includes 8 residues -Click on image for an interactive view with Cn3D
Feature 1:active site [active site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1     #               # #             #                                               
1IRU_I      1 TTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLISSNLELHSLSTg-RLPRVVTA 79  cow
CAB96046   33 TTIMGLTFKGGVILAADTRSTGGPVVMNKNKKKLVCINEQMYMAGAGTAADTAAVGRMAASSLRLHAYKTg-RKPLVQSA 111 Giardia intestinalis
NP_113181  35 TTIIGICIKNHIVLAADTRSTRGKITNDSSCKKIHFIGNNIGICGAGTSADIQNIINYLKININFLNLEKl-KETNLEEC 113 Guillardia theta
NP_493271  47 TTIVAVAFKGGLVMGADSRATAGNIIADKHCEKVHKLTESIYACGAGTAADLDQVTKMLSGNLRLLELNTg-RKARVITA 125 Caenorhabditis ele...
AAF52066   50 TTVVGIVFDGGVIIGAESRATSGGIVFSKTCRKIIELQANIFAAGAGTARDTKALVELTRAQLELHRMNTgfRKVPVCCA 129 fruit fly
CAE63471   47 TTIVAVAYKGGLVMGADSRATAGNIIADKHCEKVHKLTESIYACGAGTAADLDQVTKMLSGNLRLLELNTg-RKARVITA 125 Caenorhabditis bri...
YP_054141  40 TTIVGVLFDGGVVMAADTRATAGSIVADKNCEKLHTLAPNIWAAGAGTAADLHHQCAHFNAKLKLQRLNLn-RQSRVNEV 118 Paramecium tetraur...
XP_626814  42 TTIVGVACNDCVVLGADTRATNGPIVADKDCEKIHRLSDNIFAAGAGTAADLDHVTSLIEGNLELQKLQMn-RKPRVAHA 120 Cryptosporidium pa...
XP_648026  28 ICGLVCDKGQTVVLACDSRATVGPIVADKACMKLHKLAPNIYCGGAGTAADLTHATNFIATKLGVHRFTIg-QMPRVDTA 106 Entamoeba histolyt...
XP_955626   7 TTIVGMKYKTGVILAADTRSTQGPVVSDKNCVKIHQITDKIMCCGAGTAADASRVARMASRELRLFQNKYl-RLPLVSHF 85  Encephalitozoon cu...
Feature 1                                                      #                              
1IRU_I     80 NRMLKQMLFRYRGYIGAALVLGGVDVTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPdMEEEEAKNLVSEAI 159 cow
CAB96046  112 VKLISDHLFRYMGYVSAYVIIAGVDYKGAHLCSIDAHGSITAQPFVTDGSGRLAAQSMLEKHWKPdMEENDAVECACKAV 191 Giardia intestinalis
NP_113181 114 TKIIQNFLFNYKGMISAALIIGGFDYYGLNLYSIYPDGSMDKNFFISMGSGSFAAMTILEKNYNEiMSLESAINISKQAI 193 Guillardia theta
NP_493271 126 LRQAKQHLFNYQGYIGAYLLIGGVDPTGPHLYMCSANGTTMAFPFTAQGSGSYAAITILERDFKVdMTKDEAEKLVQRAL 205 Caenorhabditis ele...
AAF52066  130 NQMIRQLLFRFNGNIDADMIIGGADNTGAHLFCTRSDGSTDTAPFTSIGSGYQVSMSILESRWSEdLSEESACALACDAV 209 fruit fly
CAE63471  126 LRQAKQHLFNYQGYIGAYLLIGGVDPTGPHLYMCSANGTTMAFPFTAQGSGSYAAITILERDFKTdMTKEEAEKLVQRAL 205 Caenorhabditis bri...
YP_054141 119 ITKLTSKLFPYRGHIGVALIIGGIDCNGPQLASVSPHGNYVYHPFQSMGSGSLAALGILEAKFQDgLTKQQAIDLAIEAI 198 Paramecium tetraur...
XP_626814 121 VSMLSDHLYKYQGYIGAHLIVAGSDSTGNFVFQVSANGCIMQLPFTSMGSGSLCARSILEARYRDgLTESECVELVSDAI 200 Cryptosporidium pa...
XP_648026 107 VTMLKRHLFPYGGHIGAYLVVGGYDYTGAHLWGVYADGSTSQHNYYSLGSGSIAATTMLDDQWNEnLTREEGVKLATQAI 186 Entamoeba histolyt...
XP_955626  86 RKVCTQHLHKYGGGIGAALIVGGIDSEGCHLYEIHPHGSENSALFVSLGSGSLGAIATLESRYRA-MDKDEAIDLACDAV 164 Encephalitozoon cu...
Feature 1           #  ##                   
1IRU_I    160 AAGIFNDLGSGSNIDLCVISKNKLDFLRPY 189 cow
CAB96046  192 EAGVFNDLGSGSGVDLVILRLDGTSELKHC 221 Giardia intestinalis
NP_113181 194 LAGVYNDLGSGGSVDLYVISKSKNLMYRGI 223 Guillardia theta
NP_493271 206 EAGMHGDNASGNSLNLVIIEPSETVFKGPI 235 Caenorhabditis elegans
AAF52066  210 AAGMKNDLCSGGKVSLCVVRCDFSVQWPEQ 239 fruit fly
CAE63471  206 EAGMHGDNASGNSLNLVIIEPNETVFKGPI 235 Caenorhabditis briggsae
YP_054141 199 EAGIFHDMGSGSNVDVVAITKDGVDYKRNI 228 Paramecium tetraurelia
XP_626814 201 RAGIYNDLYSGSNVNILIIKNNYVKHFRHF 230 Cryptosporidium parvum Iowa II
XP_648026 187 LAGIFNDMGSGGRVNVCVIDKNGVEEKLNI 216 Entamoeba histolytica HM-1:IMSS
XP_955626 165 KAGILNDLYSGSNIDVCVIDYSGVEFLRNY 194 Encephalitozoon cuniculi GB-M1

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