3PMI


Conserved Protein Domain Family
PWWP_MUM1-like

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cd06080: PWWP_MUM1-like 
Click on image for an interactive view with Cn3D
PWWP domain found in mutated melanoma-associated antigen 1 (MUM-1) and similar proteins
MUM-1, also called PWWP domain-containing DNA repair factor 3A (PWWP3A), or protein expandere (EXPAND1), is a melanoma-associated antigen (MAA) that belongs to the mutated or aberrantly expressed type of MAAs, along with antigens such as CDK4, beta-catenin, gp100-in4, p15, and N-acetylglucosaminyltransferase V. It is highly expressed in several types of human cancers and involved in the DNA damage response pathway by contributing to the maintenance of chromatin architecture. MUM-1 is recruited to the vicinity of DNA breaks by TP53BP1 and plays an accessory role to facilitate damage-induced chromatin changes and promoting chromatin relaxation. It is required for efficient DNA repair and cell survival following DNA damage. This subfamily also includes mutated melanoma-associated antigen 1-like protein 1 (MUM1L1), also called MUM1-like protein 1, or PWWP domain-containing DNA repair factor 3B (PWWP3B). Its biological function remains unclear. The PWWP domain specifically recognizes DNA and histone methylated lysines.
Statistics
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PSSM-Id: 438967
Aligned: 40 rows
Threshold Bit Score: 73.8272
Created: 8-Feb-2008
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 3 residues -Click on image for an interactive view with Cn3D
Feature 1:putative methyl-histone binding site [polypeptide binding site]
Evidence:
  • Comment:the aromatic residues form the three-walled methyl-lysine cage that directly participate in histone methylated lysine binding and recognition.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                      #  #                                    #                          
3PMI_A          5 FEVGXLVWHKHkkYPFWPAVVKSVrq-------------------rdKKASVLYIegh--xnpKXKGFTVSLKSLKHFdc 63   human
KFM83549       31 IYKGAIVWAEFr-KIYWPALVRSVnk-------------------knRKACVWYLd------sPKKCFKLPFKKILSFhd 84   Stegodyphus m...
NP_492332      12 ISKGDVIWVPYrkDPMWPALVNNAy---------------------pKKVSYSFFpl----apGVDETKRSRFSCAPKlt 66   Caenorhabditi...
VDK74719       28 LKAGDVVWAPYrrFPEWPALVRCVy---------------------pKKVTYTFLpi-----dETSNLKSSIFSCPPQkl 81   Onchocerca oc...
KHN83466       18 IGAGDIVWAPYrrTPEWPSIVRGIy---------------------pKKITYVFLpl-----pEDKEAKVPVFNCPAN-- 69   dog roundworm
CDJ95779        8 IRKGDVIWAPYrrDPLWPALVRNSy---------------------pKKVTYIFFplprseasENSSKKTPTFSCQPK-- 64   barber pole worm
VDN50059       33 FKSGDIVWAPYrrIPEWPAIVRYFlsicpqlswssmllflsvrciypRKVTYSFLpd----avDKTAMKSASFSCPPS-- 106  Guinea worm
XP_015781659 1260 FEPNEIVWTAWs-DVHWPALVLSIdd-------------------tgENVTLQMIdn----psNRKSLTVTIDKVYSFnd 1315 two-spotted s...
OQR79634      175 FRKHDIVWADLgkGVHWPALVLNIrnrglqg----------karantMQVKVYLVh-------DGETRSLPLTKVDGFds 237  Tropilaelaps ...
XP_015922927 1195 YKEKAVVWVQIk-DRYWPAVIWRFs---------------------rRKAHVFLIts----slTYEKLKVTIDRLHSFdd 1248 common house ...
Feature 1                                               
3PMI_A         64 ---keKQTLLNQAREd---fNQDIGWCVSLITDYRVRL 95   human
KFM83549       85 k--kiNDRIKEEAKNsp--mKEHHDKVLNRTLTYLHRK 118  Stegodyphus mimosarum
NP_492332      67 ----yALVTTEPLPEn---aNSDLKKAHRAACEYLSSN 97   Caenorhabditis elegans
VDK74719       82 rlltgNEPLPAGAKNd---mKEAYKAALEILKKSGLLS 116  Onchocerca ochengi
KHN83466       70 -----KVHLFSPEDTlphdaDDAMKEAFQAAMKLVKEK 102  dog roundworm
CDJ95779       65 -----AVRALSIDDVlpshsTTDLIEAFEAAIEYLNKK 97   barber pole worm
VDN50059      107 -----KLRHISIIDTipnnaSDELKEAFEVAVDLLKNN 139  Guinea worm
XP_015781659 1316 a--erNKKYLSEGKSi---tGDSIVRAVQKAEDYSRKR 1348 two-spotted spider mite
OQR79634      238 ---prRQSYLEIGRGgrgalAVDHARAAQKANKFLRER 272  Tropilaelaps mercedesae
XP_015922927 1249 a--kyNNKLLKEAGSfp--dKDNFLKAVQKCQSYLNKV 1282 common house spider

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