5CAJ


Conserved Protein Domain Family
YaaA

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COG3022: YaaA 
DNA-binding protein YaaA associated with the oxidative stress response [Replication, recombination and repair]
Statistics
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PSSM-Id: 442258
Aligned: 450 rows
Threshold Bit Score: 134.904
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5CAJ_A        22 LILISPAKTLDYQ----SPLtT------TRYT-LPELLDNSQQLIHEARKLTP----Pq--ISTLXRISDKLAGInAARf 84 
YP_002344379   2 KILFSPSESKNENcv-kNPInE------NSFI-FKELFPYRMEALKHYEEFIKnaslQn--LQELFGIKNE--NE-IDKf 68 
WP_011979815   2 KILLAPSETKISGg--eAPFrL------DTLF-FPELLPYRTKLLHSYTNILQkgdmQv--LSKMFGLKKE--AD-IRSh 67 
WP_012842897   5 AILLPPAEGKKPGgnplAPd-MfdyrasNTFNyFSELNPERRRLIDAVQQAIQa--gDd--LEKIFGVKGPALEEaIQV- 78 
WP_011403302   5 TVLLSPADQKQPGgnpfAPd-MfdyrtsGTFNyFDDLNPDRRELIDTLQAVVDe--eDeeaLGEVFGVEGYELEEaIRV- 80 
WP_013136850   2 KVLLAPAETKNSGge-eKPFsK------KNFF-LEKNFSLRQEAFEAYEKHVQslslEe--LSSWFGIKKL--DD-VKKy 68 
WP_013326114   3 KILFSPSEGKKSGsd-eKP----------KEL-FGAL-DARKEILDTYNNIVLsgdeEk--IKQLFGFKKF--SE-CQPy 64 
WP_013554901   3 KILLAPSEGKRQGg--sGTFdP------CALL-FEELCPLRKRLLSVYRDILQsgdpHr--LQTLFGLKKE--EE-IKYy 68 
WP_081454342  12 KILLAPSESKIFPt--hQASrA------LEFI-FQGG-GARGRTLEAYEEWMRqgs--eaeILRLWGQKRL--ELeALGf 77 
WP_014768579   2 KILFSPSETKSNTit-sGPLsD------ESFI-FPHLYEKRLDILNAYQSYIEksplLl--LQKLFGYKDE--EK-TRLh 68 
5CAJ_A        85 hdwQPDFTPANARQAILAFK-GDVYTGLQAETFSEDDFDFAQQHLRXLSGLYGVLRPLDLXQPYRLEXGIRLENarGkDL 163
YP_002344379  69 k---hDLKQAPTQEAILLYT-GVSYEYLNFKALDKKSQAYILENTLIFSNLFGIVRANDTLPFYKFKQGAKIGNf---AI 141
WP_011979815  68 i---rDIVHEPAMKAIERYT-GVAFDHLSYTALDTKAQKYIDEHVILNSNLFGYLRADDLIPEYRLKQGEPVGEi---RV 140
WP_012842897  79 ---NLEIYKAPRMAALDRYSpGVMYQALDFPGLPTGAQRRFLENTIIFSGMFGLLRPDDLIPNYRLRMDAVVPGi-G-KV 153
WP_011403302  81 ---NDEIYDAPLMSALDRFSpGVMYAAMDFANLPTGAQRRLLENGVILSGLFGLLRPDDLIPNYQLGMEASLPDv-G-PV 155
WP_013136850  69 q---eSLRNKPSMKAIQRYN-GVAFDALEYNSLTKEEQNYIDENVILFSNLFGPIKASDKIPDYKFKQGAKLSSm---SI 141
WP_013326114  65 i---nDLYNSPLMAAIQRYQ-GVAYDYLQYASLTPNAQTFLKSNTLIFSNLYGPILGGDIIANYKVKQGNSVGDi---SP 137
WP_013554901  69 a--alDPLKSPVLKAVERYS-GVAYQYLDYPSLPAEAKEYVDRQLIIFSNLFGPVRASDPLPEYRLKQGNPLGEl---RT 142
WP_081454342  78 ---CQNLAHSPREKAIRLYN-GVAFKALEYETLPLEAQEWVDHSTLIFSNLFGIILAKEEIPYYRLKQGSSWEGf---ET 150
WP_014768579  69 a--tiNLFTSFTCKAIERYT-GVAYQYLDFKTLDAPSQSFLENNVMIFSNLFGPLLGKDFIPEYKLKQGESFNGl---DI 142
5CAJ_A       164 YQFWGDIITNKLNEALaaqGDNVVINLASDEYFKSVKPKklN-AEIIKPVFLDEKNGKFKIIS-FYAKKARGLXSRFIIE 241
YP_002344379 142 EKFYKEHFSKALDEYL---ENEEILDLRAGFYDKFYTPKk----KFYTYKFVK--NG--KVIS-HFAKAYRGILLSISAK 209
WP_011979815 141 EKFYHEHGAAEMEKYL---SNEEILDLRAGFYDKFYKPAk----PYTTLKFIK--EG--KVVS-HWAKAYRGIVLKEIAK 208
WP_012842897 154 SRYWRPYISPILNELL---KDRFVWNLLPAAHQEAWEDAh-TyRQMVEIKFFQEEGGQRRPVS-HGVKPLRGRLVNFIVR 228
WP_011403302 156 ADYWRPIISPMLNESL---EDRWVWDLLPEVHRNAWTDEh-TyTARVEVQFERVEDGERVPITgEDLEVQRGQFVNFIVQ 231
WP_013136850 142 EKFYKDNFSQDLDEYI----GDEIIDLRAGFYEKFYTPKd---ATVITIKFLK--DG--KVVS-HWAKHYRGMVLNTLAK 209
WP_013326114 138 DKFYKERFSYQLDLYL---TGHDVLDLRAGYYDKFYKLSk----PYTTLKFLK--NG--KTVS-HWAKAYRGIVLREIAK 205
WP_013554901 143 EQEYKAAATPLLDRSL---DSVDILDLRAGYYDKFYKPSh----PHTTMKFLK--NG--KVVS-HWAKAYRGWVLRHLAL 210
WP_081454342 151 RR-YHQAFEAELLEWL---GDEVIVDLRAEFYHASFTPLs----PTYRPLFYQ--RG--KKVS-HYAKHYRGRFLRQLAL 217
WP_014768579 143 ETFYKKNFTDAIDAWC---GDELILDLRAGFYEKFYTLKq----PYITMKFLK--NG--KNVS-HFAKAYRGTVLRDIAY 210
5CAJ_A       242 nRLTKPEQLTGFNSEG---YFFDEDSSS------NGELVFKR 274
YP_002344379 210 nQVKNNKELLANLPSN---LKLKEIQIKgl--keEIVLEILD 246
WP_011979815 209 rGVESIDDFMKLPIQG---LAIQEIQTKkn--ktEIIYSIEA 245
WP_012842897 229 eGLEDIEGLKAWRDSEg--FVLDEEASEfdeatrRAVLVMVK 268
WP_011403302 232 eTAEEMEDLREWSEEEsdeLTFDEDASTydedtkTWEIVMVQ 273
WP_013136850 210 kNVQSIAEFMNTQIPG---LELVEIQEKkn--ikLLIMNIK- 245
WP_013326114 206 aGVNTLEDYMKLEIEN---LQIHEIIEQkl--krEIVYNIVE 242
WP_013554901 211 nRVESLEELLALPIPG---LELLEIREKki--rrEILYAIDE 247
WP_081454342 218 rGEEALYGRNILEEEG---VLLKGISVKqn--lhLMEFELLH 254
WP_014768579 211 hRPSTEKEFQKIPFAG---LKLKEILLFky--kqEYIFESID 247
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