Conserved Protein Domain Family
holA

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PRK06585: holA 
DNA polymerase III subunit delta; Reviewed
Statistics
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PSSM-Id: 235834
Aligned: 84 rows
Threshold Bit Score: 316.83
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
197106980   2 ILSRRPDIERFLAK-ADAAVRAALIYGRDLGVVRDRGHQLAAKtvpnpddpFDVAILTEVDVADDPPRLEGELAAQSLMG 80 
91205921    1 MKFYFSQINRLFELiANGKVKALLLYGPDKGYIDKICRHLVKK--------FNMLQTSIEYSDLNISSLEILLNSPNFFN 72 
157826718   1 MKFYFSQINRLFELiANGKVKALLLYGPDKGYIDKICRHLVKK--------FNMLQTSIEYSDLNISSLEILLNSPNFFN 72 
51473388    1 MKFYFSQIGKLFELiAAGKIKALLLYGPDKGYIEKICTRLVKN--------LNMLLSSIEYEDLNILSFEILLNSHNFFG 72 
157825377   1 MKFYFSQIGRLFALiKAGKIRALLLYGPDKGYIEKICKHLVKS--------LNMLQTCIEYADLNISSVEILLNSPNFFG 72 
157803359   1 MKFYFSQIKRLFALiTAGKIRALLLYGPDKGYIEKICKHLVKS--------LNMLQTSIEYTELNIASLEILLNSPNFFG 72 
67459470    1 MKFYFSQIGRLFELiKAGKIRALLLYGPDKGYIEKIYKHLVKS--------LNMLQTSIEYSELNISSLEILLNSPNFFG 72 
15604063    1 MQFYFSQIGRLFELiAAGKIRALLLYGPDKGYIEKICTYLIKN--------LNMLQSSIEYEDLNILSLDILLNSPNFFG 72 
165932819   1 MKFYFSQIGRLFELiTSGKIRALLLYGPDKGYIEKICKHLVKS--------LNMLQTSIEYADLNISSLEILLNSSNFFG 72 
189183151   1 MKFTSYNIAALWSYiKKGDIRAIAVYGNDHGLIDYRCQEIIKL--------FNANLRIYDYRELTEADFIFILNSNNLFS 72 
197106980  81 GRRLVRLRlssekpAVDKAVAEALERHAKGelNPDAFFLIEAGNLGRDSALRKVGEKQPACATIPCYEDEPGDVARLVKE 160
91205921   73 QKELIRIK------GVGNSIDKNLKVILND--NYINFPVFIGEDITSSSSFRKFFETEESLASLACYHDDEAKIEKIVLE 144
157826718  73 QKELIRIK------GVGNSIDKNLKVILND--NYINFPVFIGEDITSSSSFRKFFETEESLASLACYHDDEAKIEKIVLE 144
51473388   73 QKELIKIR------SIGNSLDKNLKTILSS--DYINFPVFIGEDMNSSGSVKKFFETEEYLAAVACYHDDEAKIERIILA 144
157825377  73 QKELIKIR------SIGNSLDNNLKTILSS--DYINFPVFIGEEITASGSIRKFFETEEYLAAVACYHDDEAKIERIILD 144
157803359  73 QKELIKVR------SVGNSIDQNLKIILSR--DYINFPVFIGEEMTSSSSFRKFFETEEYLAATACYHDDEVKIERIILD 144
67459470   73 QKELIKIR------SVGNSIDKNLKTILSS--DYINFPVFIGEEITSSGSFKKFFETEEYLAAVACYHDDEAKIERIILG 144
15604063   73 QKELIKVR------SIGNSLDKNLKTILSS--DYINFPVFIGEDMNSSGSVKKFFETEEYLAVVACYHDDEAKIERIILG 144
165932819  73 QKELIKIR------SVGNSIDQNLKTILNS--DYINFPVFIGEELTSSGSIRKFFETEEYLAAVACYHDDEAKIERIILG 144
189183151  73 QREIVKIY------NTPGNINAALKKALTF--NNKNFLIMLGSEFSASSTTRQWFETQKYLAALGCYTESSQDIKKLLSQ 144
197106980 161 TLARDNVGLNADALALFVARMPKERGVARQEIERLALFLGPGSGtiAAPAQLEDFLGVEPEASLFDAAADAFGGRLAEAQ 240
91205921  145 KLAKCNKIIDREALIYLKNHLKGDHELVSNEINKLIYFVHDKQE--VTLNDIKEVLSSEIIANGSDLAMYFSQKNYVSFL 222
157826718 145 KLAKCNKIIDREALIYLKNHLKGDHELVSNEINKLIYFVHDKQE--VTLNDIKEVLSSEIIANGSDLAMYFSQKNYVSFL 222
51473388  145 KLAKTNKVISKEAITYLKTHLKGDHALICSEINKLIYFVHDVHE--ITLNHVLEVISSEITANGSNLAIYFSKKDYSNFL 222
157825377 145 KVEKTNKVISKEAITYLKAHLKGDHDLICSEINKLIYFVHDARE--ITLNDVLKVISSEITANGSDLAMYFSKKDYSNFL 222
157803359 145 KVGKTNKIISKEANAYLKAHLKGDHNLVCNEINKLIYFVHDRKE--ITLNDVLEVISSEITANGSDLAIYFSKKDYSNFL 222
67459470  145 KVEKTNKIISKEAITYLKAHLKGDHDLICSEINKLIYFIHDRRE--ITLNDVLKVISSEITANGSDLAMYFSKKDYSNFL 222
15604063  145 KLAKTNKVISKEAITYLKTHLKGDHALICSEINKLIFFAHDVHE--ITLNHVLEVISSEITANGSNLAIYFSKKDYSNFL 222
165932819 145 KVEKNNKVISKEAITYLKAHLKGDHDLICSEINKLIYFVHDARE--ITLNDVLEVISSEITANGSDLAMYFSKKDYSNFL 222
189183151 145 IVNKAGKNITAEAAVYFSNTAYGDKYCYINEINKLILYCHDCDT--ISKQEVNKCISSEILGTADLMCIYFAKGLAINFF 222
197106980 241 AGLRRAAQEGESGPAAVRAIGMHLGKLRRTLTL--AKAGAGLQEAAKASGVFWKQEREFLRQARAWSLEELDRIQPEVLA 318
91205921  223 KELDILKKQNINEVLMIRALIRHYLNLYIVLAKvkNGERVDSAIKSLSPPIFYQYINDFTKIANSLNLAECLKTLRILQQ 302
157826718 223 KELDILKKQNINEVLMIRALIRHYLNLYIVLAKvkNGERVDSAIKSLSPPIFYQYINDFTKIANSLNLAECLKTLRILQQ 302
51473388  223 QELDILKKQNINEVLIIRALIRHYLNLYIVLSKvkNGECLELAIKSLSPPIFYHNINDFINIAHALSLTECLKTLKLLQQ 302
157825377 223 QELEILKKQNINEVLIIRALIRHYLNLYIVLLKvkNGVRLELAIKSLSPPIFYQYINDFTKIATSLSLTECLETLKLLQQ 302
157803359 223 QELDILKKQNINEVLMIRALIRHYLNLYIVLSKvkNGECLELAIKSLSPPIFYQYINDFTKIASSLSLAECLETLKLLQQ 302
67459470  223 QELEILKKQNINEVLIIRALIRHYLNLYIVLSKikNGESLELAIKSLSPPIFYQYINDFTKIANSLSLTECLQTLKLLQQ 302
15604063  223 QELDILKKQNINEVLIIRALIRHYLNLYIVLSKvkNGECLEIAIKSLSPPIFYHNINDFTKIVHALSLTECIKTLKLLQQ 302
165932819 223 QELDILKKQNINEVLIIRALIRHYLNLYIVLSKvkNGERLELAIKSLSPPIFYQYINDFTKIANGLSLTECLKTLKVLQQ 302
189183151 223 KEVEKIRNNNIPDVWILRALIRYYINLYIVLMKkeHGVSIEQAIKSIQPPIFFKYVQDFQLIAQTKTLNNVLHTLNELYM 302
197106980 319 ADKACKTAGSPDRLIAERLALTVAGRA 345
91205921  303 AEVDYKLNPAGFDLLQKIVDVIPAFSY 329
157826718 303 AEVDYKLNPAGFDLLQKIVDVIPAFSY 329
51473388  303 AEVDYKLNPASFDLFQSIL-------- 321
157825377 303 AEVDYKLNPAGFDLLQKVIDVIPA--- 326
157803359 303 AEVEYKLNPASFDLLQKIYTR------ 323
67459470  303 AEVDYKLNPAGFDLLQSIL-------- 321
15604063  303 AEVDYKLNPASFDLFQSIL-------- 321
165932819 303 AEVDYKLNPASFDLFQSILQSK----- 324
189183151 303 AELSVKTTHHYINNMIEVVFLKITHKL 329
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