Conserved Protein Domain Family
Complex1_LYR_SDHAF1_LYRM8

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cd20268: Complex1_LYR_SDHAF1_LYRM8 
LYR (leucine-tyrosine-arginine) motif found in mitochondrial succinate dehydrogenase assembly factor 1 (SDHAF1) and similar proteins
SDHAF1, also called SDH assembly factor 1, or LYR motif-containing protein 8 (LYRM8), is a LYR complex-II specific assembly factor that plays an essential role in the assembly of succinate dehydrogenase (SDH), an enzyme complex (also referred to as respiratory complex II) that is a component of both the tricarboxylic acid (TCA) cycle and the mitochondrial electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. It promotes maturation of the iron-sulfur protein subunit SDHB of the SDH catalytic dimer, protecting it from the deleterious effects of oxidants. SDHAF1 may act together with SDHAF3. It is mutated in SDH-defective infantile leukoencephalopathy. SDHAF1 belongs to the Complex1_LYR-like superfamily that consists of proteins of diverse functions that are exclusively found in eukaryotes and contain the conserved tripeptide 'LYR' close to the N-terminus.
Statistics
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PSSM-Id: 380763
Aligned: 37 rows
Threshold Bit Score: 61.8434
Created: 4-Apr-2019
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
A6NFY7         5 SRLQRQVLSLYRDLLRA--------------GRGKPGAEARVRAEFRQHag-lpRSDVLRIEYLYRRGRRQLQL 63   human
Q54HG5         9 SGLQKAVLSLYRSFLRVsnk--------kemDNPSSSISNYIKTQFRLKattiqKRDINKIESLLVKGKRQLEQ 74   Dictyostelium discoi...
PVD26243       5 SKIQLQVLSLYKEFLRV--------------TKNQSGFQEYVKKEFRKNas-ipRTDFVQVEYLLHRGRRQLSM 63   Pomacea canaliculata
KNH06478      86 SGIQRSILSMYRSFLRIayr--------kedQKSKENLLSLIRAEFRKHia-vsKRDFTRIESLVHKGNRQLDS 150  Perkinsela sp. CCAP ...
RMX60450       4 SRLQKEVLSLYRRFLRA--------------SQDKPGFTEHIKYEFRKNsg-ipKTDGLRIEYLLRRAQNQLKQ 62   Pocillopora damicornis
PIK44698       5 SKLQLQVLALYKNFLRV--------------SADKPGVRHHIQTEFRKWss-lqRTDVLRIEHLIRRGQRQLTM 63   Japanese sea cucumber
XP_007909005   5 SKLQKHVLNLYREFLRA--------------ARGKSGFLPRIREEFRRNsq-ipKTDVMQIEYLLRRGQRQLQM 63   elephant shark
XP_006002677   5 SKLQKQVLGLYRQFLRA--------------GKEKPGFLPRIREEFRTNar-ipKSEVMYIEYLFRRAQRQLEL 63   coelacanth
RJW60190     314 SKLQREVLRLYRDLLRSvtprpvcgdaepesRPELTSLRQSIRNEFRRQaslykRTDILQIEAALRRGHRRLED 387  Clonorchis sinensis
OZF99338     459 SKLQKLVLSTYRDFLRAs-------------RGRDPSIRAHIQQEFRAAatrfqPSEVLLIEHHLRRSQRQLDS 519  Caenorhabditis remanei
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