Conserved Protein Domain Family
clpC

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CHL00095: clpC 
Clp protease ATP binding subunit
Statistics
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PSSM-Id: 214361
Aligned: 21 rows
Threshold Bit Score: 758.051
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
189095390    1 MFERFTEKALRVILLAQEESRRTGHNFVGTEQIVL--------------GLIGEGTGIGSRALRN---ADVKLSDARREV 63  
215400791    1 MFDRFTEKALQAIILGQEESRRLGHNFVGTEQILL--------------GLIGENTGVAYRALKS---FRVTLKDARLEV 63  
31442384     5 TINYSFLNCTKEVIYCLEEAKKIAILTNSKSELIIikpihlclslifnsKLIQKILNINYSILNQkiiXNIIFNYNFIDI 84  
269101123    1 MFERFTERALQVIMMSQEESRRLGHNFVGTEQILL--------------GLLGEGCGVTINAVRE---YGINIRKVRIEV 63  
242624367    1 MFERFTEKAIKVVMLSQEESRRLGHNFVGTEQILL--------------GLIGENGGVAYKVLRS---LGVTLREARTEV 63  
299830628    1 MFEKFTEGAIKVIMLSQEEARRMGHNFVGTEQLLL--------------GVIGQRHGIGARALKK---LKVTLKKARKEI 63  
299830407    1 MFEKFTEGAIKVIMLSQEEARRMGHNFVGTEQLLL--------------GVIGQRHGIGARALKK---LKVTLKKARKEI 63  
118411088    1 MFEKFTEGAIKVIMLSQEEARRMGHNFVGTEQLLL--------------GVIGQRHGIGAKALKK---LKVTLKKARKEI 63  
11467441     1 MFEKFTEGAIKVIMLSQEEARRMGHNFVGTEQLLL--------------GIIGQRHGIGARALKK---QKVTLKKARREI 63  
118411220    1 MFEKFTEGAIKVIMLAQEESRRMGHNFVGTEQVLL--------------GILGQRHGIAGRALAQ---LNVTLKKTRKEV 63  
189095390   64 DRLIGRGTG--FVSVEIPFTPRAKSILEQSLQQARAFTHSYIGTEHLLLALLEDEEGVAAQLLLNL---KVDLGKVRRIL 138 
215400791   64 ERMLGRGRGttFPAGEIPFTPRAKKILEMSMEQGRKYNHSYINTEHLLLAIIEDTNGAANNILIQL---GVNLLRLKTKV 140 
31442384    85 SNLNKKLDKvyYLDKNLLLIFNILNILEYPF-----------NTLLLFYYLCKQNIKLYSYIFSILninNINFILIKNYI 153 
269101123   64 ERLIGKGTG--FVAIEIPFTPRAKKILEMSIKQSKDLNHSYINTEHIFLALLNDTDGICAKVLQNL---GANIPRIKSYI 138 
242624367   64 ERIIGRGSG--FVAVEIPFTPRAKRVLEIAIEEARDLGHGYIGTEHILLALLEEEVGVGVRVLQQL---GLEVSQIRTEV 138 
299830628   64 ELYIGRGTG--FVASEIPFTPRAKRVLEMAVHEGKDLGQNFVGTEHILLALIAESDGVAMRTLDKL---NVDIQKLRNLI 138 
299830407   64 ELYIGRGTG--FVASEIPFTPRAKRVLEMAVHEGKDLGQNFVGTEHILLALIAESDGVAMRTLDKL---NVDIQKLRNLI 138 
118411088   64 ELYIGRGTG--FVASEIPFTPRAKRVLEMAVHEGKDLGQNFVGTEHILLALIAESDGVAMRTLDKL---NVDIHKLRNLI 138 
11467441    64 ELYIGRGTG--FVASEIPFTPRAKRVLEMAVHEGKDLGQNFVGTEHILLALISESDGVAMRTLDKL---GVNIPKLRNLI 138 
118411220   64 EKYIGRGTG--FVASEIPFTPRAKRVLEMSIHEAQDLGVNYVGTEHILLSLLNEADGIALRTLDRL---RVNIPKLRHLI 138 
189095390  139 LQEIGELADAASViikrreeeierkiqeiiendrkraaqaAEDESERkakiedfkrrmsakmpdldleaifrdtevkkqe 218 
215400791  141 LELMGEIVEATATlltsppksndknkkvgeifvlhgqnqtDEDGVIK--------------------------------- 187 
31442384   154 NNFLPNINI----------------------------------------------------------------------- 162 
269101123  139 LNELDQNHEGSPKvlanvasgeqssnpnikqtkdlflfddLDPSSLT--------------------------------- 185 
242624367  139 LMQIGETLEVVLGgd------------------------rSEFFEMS--------------------------------- 161 
299830628  139 LTYIEETQEEILRpltqaekfl---------------------------------------------------------- 160 
299830407  139 LTYIEETQEEILRpltqaekfl---------------------------------------------------------- 160 
118411088  139 LTYIEETQEEILRpltqaekfl---------------------------------------------------------- 160 
11467441   139 LMYIEENQEEILRpltqaekfl---------------------------------------------------------- 160 
118411220  139 FTYIEEQQEDILKpplsdqe--------------kwllsrEKGNKWT--------------------------------- 171 
189095390  219 ireeireqlrarfdtedfrdffvkelddifeeekseevmivvdTPVLNEFSTNLSAMVEDGSVDPVIGREKEVERVTQIL 298 
215400791  188 -------------------------------------------RPTLEEFTTNLTDAALKGNLDPVIGREKEIERVIQIL 224 
31442384   163 -------------------------------------------PEVLKDFLNILNKR------NNLIGRDKEIKNIIEIL 193 
269101123  186 -------------------------------------------APNLMEYTTDLTESAERAKIDPVVGRENEIERVIQII 222 
242624367  162 -------------------------------------------GVSIEEFTTNLTEAAFNGKLDPVVGRDEEIERVIQIL 198 
299830628  161 ----------------------------------lerekkgspTPTLDEYAENITKEAIDGNLDPVIGREKEIDDVIAVL 206 
299830407  161 ----------------------------------lerekkgspTPTLDEYAENITKEAIDGNLDPVIGREKEIDDVIAVL 206 
118411088  161 ----------------------------------lerekkgspTPTLDEYAENITKEAIDGNLDPVIGREKEIDDVIAVL 206 
11467441   161 ----------------------------------lerekkgssTPTLDEYSENISKEAVDGKLDPVIGRDKEIHEVIKVL 206 
118411220  172 -------------------------------------------TSTLENYSENITQEALDKRLDPVIGRNEEINALVKVL 208 
189095390  299 SRRRKNNPILIGEPGVGKTAVAEGLALRIANQEITQGLANREVAVLDVGLLIAGTKYRGEFEERIKRIMEEIKRKKTMIL 378 
215400791  225 SRRRKNNPILIGEPGVGKTAVAEGLAQRIVQKEAPATLHDKKIIVLDVGLLLAGTKYRGEFEERLKRIVEEIQSSDDIII 304 
31442384   194 XRKLNRNIILLGNIGIGKLSIVEKLVYLIPN---------KIFLELNITNLISQSNNIN----IIKNLFNFLKKYNNIIL 260 
269101123  223 SRRRKNNPILIGEPGVGKTAVAEGLAQRIVQREVPSELHDYKIFVLDITLLLAGTKYRGEFEERLKRIVQELKEQKNIII 302 
242624367  199 ARRRKNNPVLIGEPGVGKTAVAEGLAQRIVKRDVPDLLDEKQVISLDIGLLLAGTKYRGEFEERLKRIIDEVRSSNNIIL 278 
299830628  207 ARRTKNNPVLIGEPGVGKTAVAEGLAQLILTEKVPDFLDGSLIMALDLGSILAGTKYRGEFEERLKRIVEEAQNDSAVII 286 
299830407  207 ARRTKNNPVLIGEPGVGKTAVAEGLAQLILTEKVPDFLDGSLIMALDLGSILAGTKYRGEFEERLKRIVEEAQNDSAVII 286 
118411088  207 ARRTKNNPVLIGEPGVGKTAVAEGLAQLILTEKVPDFLDGSLIMALDLGSILAGTKYRGEFEERLKRIVEEAQNDSAVII 286 
11467441   207 ARRRKNNPVLIGEPGVGKTAVAEGLAQLIIAEKAPDFLDGNLLMALDLGSILAGTKYRGEFEERIKRIVEEVQNDSAIIL 286 
118411220  209 GRRRKNNPVLVGEAGVGKTACAEGLALLMVSGECPEFLDNHAVLCLDLGSVLAGTKYRGEFEERMKTIIEDVQKNGKIIL 288 
189095390  379 VIDEIHTIIGAGSAEGSL-DAANILKPALSRGELQCIGATTLDEYRT-IEKDPALARRFQPVYVDEPSPAETLTILQGLR 456 
215400791  305 VIDEVHTLIGAGASEGAL-DAANILKPVLARGELQCIGATTLDEYRQhIEKDAALERRFQPVQVDEPSITETIEILKGLR 383 
31442384   261 YCKDFHLLFNNSNTTTDLtYIKNIIYELLFLNKIQIIATSSENYYDKiLKNEEKLKFLFAKINILELNK----NILFLIM 336 
269101123  303 VIDEVHTLVGAGAAEGAL-DAANILKPALARGELQCIGATTIDEYRQhIEKDPALERRFQPVWVNEPSIEETIAILKGLR 381 
242624367  279 VIDEVHTLIGAGAAEGAV-DAANILKPALARGELQCIGATTIDEYRKhIERDSALERRFQPVQIDEPSVSDTVQILRCLR 357 
299830628  287 VIDEIHTLVGAGAAEGAV-DAANILKPALARGKFRCIGATTNDEYRKyIERDPALERRFQPVHVEEPSVGTTIEILRGLR 365 
299830407  287 VIDEIHTLVGAGAAEGAV-DAANILKPALARGKFRCIGATTNDEYRKyIERDPALERRFQPVHVEEPSVGTTIEILRGLR 365 
118411088  287 VIDEIHTLVGAGAAEGAV-DAANILKPALARGKFRCIGATTNDEYRKyIERDPALERRFQPVHVEEPSVGTTIEILRGLR 365 
11467441   287 VIDEIHTLVGAGAAEGAV-DAANILKPALARGKFRCIGATTIDEYRKyIERDPALERRFQPVHVKEPTVGVTIEILLGLR 365 
118411220  289 VIDEIHTIVGAGAAEGAV-DAANLLKPALARGTLRLIGATTLDEYRKyIEKDPALERRFHSIVVEEPTVEVTIDILNGLR 367 
189095390  457 TSYEGFHNVR-IPDFTLKRSIELSTGYIKDRFLPDKAIDLVDEASARVKIIRvSSDDPEVKVHEKDLQRILADKDRALRG 535 
215400791  384 QRYEHHHQLT-ISTAALVAAANLGAQYIADRFLPDKAIDLIDEAGSRVRLNN-YYVPESARELDKELREILQAKDDAVRA 461 
31442384   337 KQYLIKNNINwINDNILEIIIDLSKKYIKDYAFPKIGFLILDSIINKYIKIK---------------------------- 388 
269101123  382 LRYEQHHRLE-ITNEALVAAANLGAQYIADRFLPDKAIDLIDEGSARVRLVN-YRLPPAVQILDKELRRILEDKDLAVRE 459 
242624367  358 PSYERHHGLK-ISDEALEAAASMGAQYIADRFLPDKAIDLIDEAGSRVRLKA-VRMPDAASDLDRELRDIIKEKDTAIAD 435 
299830628  366 SKFEQHHTLS-YHDKALEQAAILSDKYVADRYLPDKAIDVLDEAGARVRLEN-RRLPLGLRSLMHELQETIKDKEECIKE 443 
299830407  366 SKFEQHHTLS-YHDKALEQAAILSDKYVADRYLPDKAIDVLDEAGARVRLEN-RRLPLGLRSLMHELQETIKDKEECIKE 443 
118411088  366 SKFEQHHTLS-YHDKALEQAAILSDKYVADRYLPDKAIDVLDEAGARVRLEN-RRLPLGLRSLMHELQETIKDKEDCIKE 443 
11467441   366 SKFEEHHTLS-YHDKAVEQAAILADKFIADRFLPDKAIDVLDEAGSRVRLEN-RRLPRGMKRLLKELQDTLRDKEESIKE 443 
118411220  368 PEFQRHHALT-YSSDSLTAAAQLASRFITDRNLPDKAIDVIDEAGSRVRLRN-RLLPIGIQKLLIELHDTLKDIDEAVRT 445 
189095390  536 QDFELAMEIRDAEMTLRTRITAMIKNLETTKEgelEYQKVlPAVHEEHIADIISSWTGIPLNKLGAAEADKLI--RMERE 613 
215400791  462 QNFEKAGELRDREMETRSMITAIIKSQKLIKKp--VNVEK-PTVEEEDIAHVVGAWTGIPVNKITKNETAKLL--DMENI 536 
31442384   389 -----------------------------------------KNISKKDIIAIISQYSKFPNTLLLKETNNTIIinNIDLK 427 
269101123  460 QRFETATEIRDDELSLRSQMGAIIKASNTPIPk--GVLER-LKVGSQDIASIVALWTGVPVTKITKDENTRLL--ELENV 534 
242624367  436 QNFEVAATALDRELELRAQLSAILATVDRIPGpaiKKMVD-PVVTEDDIANVVSAWTGIPVNKISKSESEKLL--HMEET 512 
299830628  444 HDFEAAKQLLDHEMEVRTHIRIMKQSALTNEArgfSRRDV-DMVTETDVSDVISNWTGIPVTKITGSESERLL--KMEDT 520 
299830407  444 HDFEAAKQLLDHEMEVRTHIRIMKQSALTNEArgfNRRDV-DMVTETDVSDVISNWTGIPVTKITGSESERLL--KMEDT 520 
118411088  444 HDFEAAKQLLDHEMEVRTHIRIMKQSALTSEArgfSRRDV-DMVTETDVSDVVSNWTGIPVTKITGSESARLL--KMEDT 520 
11467441   444 HDFDIAKQLVDHEMEVRTHIRIMKQSILTNETlglARKEI-DTVLEGDVAEVIAGWTGIPVNKISDSESKRLL--TMEET 520 
118411220  446 HDFNTAKLLLDHEVEVRTHLRIMKYALASKDEyrkKMVTF-DRVLEQDVTEVVSAWTGVPVTKINESENERLK--KMEDI 522 
189095390  614 LHQRVIGQEEAVTKISNAVKRSRVGISNPDRPIASFLFCGPTGVGKTELTKALGDYFFGSADTIVRLDMSEYMEKHTVAR 693 
215400791  537 LHQRVVGQSQAVTAVSRAIRRARVGLRNPNRPIASFLFAGPTGVGKTELTKALASYFFGSEDSMIRLDMSEYMEKHTVAK 616 
31442384   428 LKKYVYGQDIAITKISSSLKRAYTGLKEQNKPIGSWLLCGPSGTGKTELVKSLAYLLFGSEKELIRFDMSEFMEKHSISK 507 
269101123  535 LHQRVIGQKEAVSAVARAVRRARVGMRNMKRPIASFFFSGPTGVGKTELTKTLASFFFGAEDAMVRLDMSEFMERHTVAK 614 
242624367  513 LHSRIIGQEQAVSAVSRAIRRARVGLRNPNRPIASFLFSGPTGVGKTELTKALALYFFGAEDAMVRLDMSEFMERHTVAK 592 
299830628  521 IHERIIGQKHAVVAVSKAIRRARVGLRNPNRPIASFIFAGPTGVGKTELTKALSDYMFSSEDSMIRLDMSEYMEKHTVAK 600 
299830407  521 IHERIIGQKHAVVAVSKAIRRARVGLRNPNRPIASFIFAGPTGVGKTELTKALSDYMFSSEDSMIRLDMSEYMEKHTVAK 600 
118411088  521 IHERIIGQKHAVVAVSRAIRRARVGLRNPNRPIASFIFAGPTGVGKTELTKALSDYMFGSEESMIRLDMSEYMEKHTVAK 600 
11467441   521 LHERLIGQHHAIVSVSKAIRRARVGLRNPDRPIASFIFAGPTGVGKTELTKALSEYMFGNEDSMIRLDMSEYMEKHTVAK 600 
118411220  523 LHERLIGQHHAIVAVSKAVRRARVGIQDPKRPIASFIFAGPTGVGKTELTKALAEYIFDTEKNMIRFDMSEFMERHTVAK 602 
189095390  694 LIGSPPGYVGYNEGGQLTEAVRRRPFSLVLFDEVEKAHPDIFNLLLQVLDDGRLTDSQGKVIDFTNTIIVMTSNLGSKhl 773 
215400791  617 LIGSPPGYIGYNEGGQLTEAVRRKPYTVILFDEVEKGHPDIFNLLLQILEDGRLTDSKGRVINFKNTIIIMTSNLGSS-- 694 
31442384   508 LIGSPPGYVGCEEGGLLTEAVKKKPYSVILFDEIEKAHKDINNIMLQLLDEGTLTDSKGEHIDFTNTLIIYTSNLGCP-- 585 
269101123  615 LIGSPPGYIGYNEGGQLTEAVRRKPYTVILFDEVEKAHPDVFNLLLQILEDGRLTDSKGRIIDFKNTILIMTSNLGSK-- 692 
242624367  593 LIGSPPGYVGYSEGGQLTEAVRRKPYTVVLFDEVEKAHPDVFNLLLQILEDGRLTDSKGRTIDFKNTMLILTSNIGAK-- 670 
299830628  601 LIGSPPGYVGYNEGGQLTEAVRSKPYSVVLLDEVEKAHPDVFNLLLQILDDGRLTDSKGRVIDFTNTLIIMTTNLGAK-- 678 
299830407  601 LIGSPPGYVGYNEGGQLTEAVRSKPYSVVLLDEVEKAHPDVFNLLLQILDDGRLTDSKGRVIDFTNTLIIMTTNLGAK-- 678 
118411088  601 LIGSPPGYVGYNEGGQLTEAVRSKPYSVVLLDEVEKGHPDVFNLLLQILDDGRLTDSKGRVIDFTNTLIIMTTNLGSK-- 678 
11467441   601 LIGSPPGYVGYNEGGQLTEAVQTKPYSVVLLDEVEKAHPDVFNLLLQILDDGRLTDSKGRTIDFRNTMIIMTTNLGAK-- 678 
118411220  603 LIGSPPGYVGHEDGGQLTDAVRRKPYSIVLFDEVEKAHPDVFNLFLQILDDGHLSDSKGRLISFKNCIIVMTTNLGAR-- 680 
189095390  774 dshfnknvsiidneseksdsnTIDssfdeykaptffwedykefvkqdvkekeltlaeINSSDAEYDAEMKQqlekdIEKY 853 
215400791  695 ---------------------AIEqq------------------------------sRLEEDLGFDAITNI-----EETR 718 
31442384   586 -----------------------------------------------------------TSSVQFKSFQNGee--lSEKE 604 
269101123  693 ---------------------AIQdn------------------------------dLSSQGMGFGGEKADt----QKTK 717 
242624367  671 ---------------------VIQen------------------------------dSSSGDIGFGGNLVNg----NDSS 695 
299830628  679 ---------------------IIEresgiksks---------------dqgergfkiTPDAVLGWEPVPEPi---kDPEL 719 
299830407  679 ---------------------IIEresgikaks---------------dqgdrgfkiTPDAVLGWEPVPEPi---kDPEL 719 
118411088  679 ---------------------IIEresgikskt---------------eqgeggfkiTPDAVIGWEPAPEPi---kDPEV 719 
11467441   679 ---------------------IIEkesgikpkt---------------kqdkpafriDESGCLGWEPTPEPi---kDSAL 719 
118411220  681 ---------------------VIErespilpkskmgfnrryeetkeqresrkievmvNTDGTFLLKPPVKKevnadDEKK 739 
189095390  854 YqeyekqeledekfkeldakialddedeaedDEVRNLVLGEVKSFFRPEFVNRIDDIIVFHPLRKSDVTQILEILINQLS 933 
215400791  719 Y------------------------------SMLCNLVNEELKEFFRPEFLNRIDEMIVFQQLTKDEIEDIAKIMINDLV 768 
31442384   605 Y------------------------------KFLSKNVDIAVKKFFKPEFLNRLDSIIVFKPLSILCLINIINKFIFNLN 654 
269101123  718 Y------------------------------AQLCNTVGESLKAFFKPEFLNRIDEIIVFEQLTKTNITEIAVIMVNDLI 767 
242624367  696 Y------------------------------DRMASLVNEELKRFFRPEFLNRLDEIIVFRQLTRNDLSQIADIMLKQLC 745 
299830628  720 F------------------------------ERVSKLVNEELKNFFRPEFLNRIDEIIVFNHLTRIDIWEICELQIKSVQ 769 
299830407  720 F------------------------------ERVAKLVNEELKNFFRPEFLNRIDEIIVFNHLTRIDIWEICELQIKSVQ 769 
118411088  720 F------------------------------ERVTKLVNDELKNFFRPEFLNRIDEIIVFNHLTRIDIWEICELMIKSVQ 769 
11467441   720 F------------------------------EKVTELVNEELKEFFRPEFLNRIDEIIVFNHLTKYDIWEICGLMVKQLQ 769 
118411220  740 F------------------------------ATISALVQEELKKFFRPEFLNRIDDIIVFNHLSKHDIWEICGILLKGLG 789 
189095390  934 KRL-RKK-NVVLHIDDDAKQILIDEGFDPAMGARPLRRSIQQNIENQAAQAVLETPVKTIRSLLLAVrhpyy-------- 1003
215400791  769 KRS-EQQ-KLELEVSDKVKNKLIEEGYNPAYGARPLRRAVMRLIEDNIASKFLEESPEDQVRIFVDV------------- 833 
31442384   655 KNLqNNNiLLQVELEEDIKILLAKLAYNPLYGARPLKRIIQQFIEKPISEIIINFNFKLPHLFSIFN------------- 721 
269101123  768 ERVkKEK-DITLSLTPRMMELLVEEGFNPTYGARPLRRALVKLVEDKVSLEYLRYKNENDDEDPVDIlvdvdlnkvkvsi 846 
242624367  746 DRA-EDK-SFTLKVTQRAKLVLINEGFNPTYGARPLRRAIMKLLEDRLATQLLSESIEPGSMILVDS------------- 810 
299830628  770 KRL-KEK-GINLIVDLAVQAFLTDEGYDPIYGARPLRRAIMKYLEDTLAEQCLSKTLYPNTKIIVTRkkveg-------- 839 
299830407  770 KRL-KEK-GINLIVDLAVQAFLTDEGYDPIYGARPLRRAIMKYLEDTLAEQCLSKTLYPNTKIIVTRkkveg-------- 839 
118411088  770 NRL-KDK-GINLIVELSVQAFLTDEGYDPIYGARPLRRAIMKYLEDTLAEQCLSKTLYPNTKIHVRRkkveg-------- 839 
11467441   770 KRL-EEK-ELTLEVDVSVRNLLTEEGYDPVYGARPLRRAVMRLLEDTLAQQCLSKPLYPGTILRVSRvkeeg-------- 839 
118411220  790 KRL-GEQ-GATLSVDNAVQYYLTEEGYDPVYGARPLRRAITKLLEDRLAMACLDNPIQPGTHINITQqikpytt------ 861 
189095390 1004 --------------ldikPGQSKIKLYVFPLPSFILNK 1027
215400791  834 ------------------NEFGEIVVTLGPLQNTKSNA 853 
31442384   722 ------------------NKEKNIISYLIQKINNIKNK 741 
269101123  847 sktiikeevkpaqeikpaQEKRSYKIIVPRLEKIRKEE 884 
242624367  811 ------------------PDQKELVINISKVDIDVDQP 830 
299830628  840 -------------tlltyTNELEVEIDFSDVDPSLLEN 864 
299830407  840 -------------tlltyTNELEVEIDFSDVDPSLREN 864 
118411088  840 -------------tlmtyTNELEVEVDFSDVDPSLLDE 864 
11467441   840 -------------tlasyTNDVKVEIDYRRVDPRLLEQ 864 
118411220  862 ------------tystvfEDLYTTEILIEFDNSNVKRP 887 
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