Conserved Protein Domain Family
RPB9

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COG1594: RPB9 
DNA-directed RNA polymerase, subunit M/Transcription elongation factor TFIIS [Transcription]
DNA-directed RNA polymerase, subunit M/Transcription elongation factor TFIIS is part of the Pathway/BioSystem: RNA polymerase
Statistics
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PSSM-Id: 441202
Aligned: 122 rows
Threshold Bit Score: 77.6812
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
EHR77105       1 MF---------CPQCGTLAFPSp---SGDISCTnyKCGYNGPANlvikgtdgkdVDLSKAKSSTEAKSRKYEVIKDSdkL 68 
AOV94756       2 EF---------CDDCGGMLVSEkkdgETVMQCR--NCGKVQDVDs---------DDMKV-TEEKEEDPKDRLNVNEEgaD 60 
WP_011249488   2 KF---------CPKCGNLMLPDr--kRKVWVCR--SCGYEEPFDee------kdREKTKITKKVEHKPDEEIIVVEQ--D 60 
WP_012122998   2 RF---------CPKCGSLMVARrvggKTILKCM--RCGYEMEVTg--------aQSTLRTAKKIRHSVKEKTVVIDNniK 62 
WP_083757847   3 KL---------CPKCGGLMRPRkmdgKLYLICT--RCGYKVEADas-------eALGFKVSTRIDHKPGEKTLVLESg-G 63 
WP_083777663   6 KVkkedleekvDEENQSNQ--EteeeKVVFKCM--TCGYEKDPSe---------VDQDQYKVKETVESSDSVIMRGD--E 70 
WP_010868495   3 KF---------CPKCGSIMIPDk--kRGVFVCR--RCGYEEPINpe-------dAKAYKRTEEVKHKPDEGVIVVEQ--D 60 
WP_083829953   3 RF---------CPRCGGLMKPVneggTYYLVCS--RCGYKVKATer-------dLALYGLKVKIEHSEKEKTLVLKDs-G 63 
WP_052885516   5 EF---------CPKCGGIMVPTvlngKKVLKCT--HCGYIAEGNn---------PNTYKLSQKIERNPKDTVTLVDV--D 62 
WP_048164671   3 KF---------CSKCGSIMVPKvkdgVKILVCR--RCGHEEPLEee-------tAKAYQVKQKIKHAPDEGVIVVEQ--D 62 
EHR77105      69 QGVLTTGT-YMCPKCDKM-EVFSYLEQTRSSDEPETRMLTCKNCGHGWREY 117
AOV94756      61 DTARPTTQ-EECHKCGEEtEHEWWMKQTRASDEPATRFYKCTECGNVYKEY 110
WP_011249488  61 LKTLPTTK-VTCPKCGND-TAYWWEMQTRAGDEPSTIFYKCTKCGYTWRAY 109
WP_012122998  63 VETLPKTRdVICPKCGHD-EAYYWFVQTRAGDEPPTRFYKCTRCGHVWREY 112
WP_083757847  64 EVNLPVTReVTCPKCGWH-EAYYWVIQTRAADEPPTRFFKCTKCGYTWREY 113
WP_083777663  71 SGMRSTVR-EICPKCGHD-RASYELLQTRSADEAPTRFFTCEKCHHKWRGY 119
WP_010868495  61 FSTLPTAK-VTCPKCGYH-EAWYWELQTRAGDEPSTIFYKCKRCGYVWRSY 109
WP_083829953  64 EANLPVTReVTCPKCGYH-EAYYWFIQTRAADEPPTRFYKCRRCGHVWREY 113
WP_052885516  63 VSTLPVVE-FKCENCGND-KAYVYELQTRAGDEPATRFYICTRCRKVYREY 111
WP_048164671  63 VRTLPIAKgIKCPKCDNE-EAYWWELQTRAGDEPSTIFYKCTKCGHTWRSY 112
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