Conserved Protein Domain Family
TrmR

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COG4122: TrmR 
tRNA 5-hydroxyU34 O-methylase TrmR/YrrM [Translation, ribosomal structure and biogenesis]
tRNA 5-hydroxyU34 O-methylase TrmR/YrrM is part of the Pathway/BioSystem: tRNA modification
Statistics
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PSSM-Id: 443298
Aligned: 759 rows
Threshold Bit Score: 65.2056
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_012178614  31 TAg-----iFAKLLDELKPA---KIVEVGTWKGASAIHMAklCAEAGietDILCIDTFLGAsglwlrpgyaeemlktkng 102
NP_600347     39 EMtg---qlLTTLAATTNGNgstGAIAITPAAGLVGLYILngLADNT---TLTCIDPESEH------------------- 93 
WP_013349508  42 PAgr---smLQMLCTLRQPR---NIVEIGSGVGVASLAMLevMGSSV---TLTAIESDLEH------------------- 93 
WP_043578017  15 AM-------LRFLASVLRAK----AVVEVAGSASTALALCggMVPEG---TLTCITLDTEA------------------- 61 
WP_104913964  38 RTlg---stIFAIARGMDAR---NIIEVGTGVGVTTMRLAeaAPQ-A---HITSIDSEPDH------------------- 88 
WP_053961547  35 PIas---eaVTMVTLLTGVK---TAAVVSYSGAVAALSIAhgMPGGG---VVTLVNPQPEL------------------- 86 
WP_065247511  45 AGsa---ahARSVVALLGAR---AIVQVGAGAGALSLYLAsaMGSDA---TLTAIDSEPEN------------------- 96 
WP_006289949  50 CAsagqcafIANQALASQAT---SVIIISTNPLLETLHLVkvLSDEA---VVTVVNPSGHA------------------- 104
WP_011096148  37 PAig---ahIKTQVAALPAP---QVLEIGTGIGLSALKMVs-vNRKA---HITTIEVNPDF------------------- 87 
WP_003850980  54 SItg---qlLTTLAGVSRAH---GAIAVTPAASVVGLHLLagLGEKG---ILTCIDPEPEH------------------- 105
WP_012178614 103 mptiFPTFLRNVID-AGL-Td-VITPLPLPSREAATVLVkrrIRADLIYIDGDHS-YegcLEDLRNYRPALAPEGLMLAD 178
NP_600347     94 ----QRQAKALFRE-AGYsPs-RVRFLLSRPLDVMSRLAn--DSYQLVFGQVSPMdL---KALVDAAWPLLRRGGALVLA 162
WP_013349508  94 ----ANAMRQGLRD-SGIpSa-RARIINERAENVLSRLAd--HAYDMVLIDAGAEqL---LEYVAEAKRLAGTGGVIIVN 162
WP_043578017  62 ----QRATRDAVTE-AGLsAs-RLRMITGVGSEVLPRLAe--DSYDLVHIVVGTSrL---AELLELAAPLLRPGATLILN 130
WP_104913964  89 ----HVTLRELMPQ-VGL-EtsSLRLITERAQDVLPKMn--eNSYDLVVLDVPADdV---EACFGDAVTLCRPGGSILIA 157
WP_053961547  87 ----VEHARQRYGE-EKPaGv-LLRPITGLPLDVMSRLAd--GAYDLVFVEDVADqL---GLFVETSARLLRSGGILLLP 155
WP_065247511  97 ----VRLVREACTE-AKIpEa-RVRTINAQPLEVFTRLTr--GAYDMIVVNASEPkL---DALVEGALNILRSGGALVVM 165
WP_006289949 105 ----NEETRRELTRiQNEtAl-TLRMVNAAVENYLPRLNe--NDYDLVILGKGVSdW---DQAITMSSRLLRSGGVLIIN 174
WP_011096148  88 ----YNRAKNNLTN-Y---Fs-CLRFINSNALEVIPRMNr--NMYDLVLIDANPRdV---LNYFELALGVVKSGGAILVP 153
WP_003850980 106 ----QKRAKKAFRD-AGYgSs-RIRFLPSRPLDVMGRLAr--GQYQVIFGEVAPLdL---RAFIDASLPLLASGGVLVLP 174
WP_012178614 179 DYTfdgvnr----------------aitefVDE---TG-----CEMlDTgnkvvlsfgrditglrdwqaemaekRAAMEA 234
NP_600347    163 DALldgtiadqtr-------kdrdtqaardADEyirSIegahvARL-PLg------------------------AGLTVV 210
WP_013349508 163 NAFdehrlakpai-------rrnstvmtrdALRmlrEDprlqtHLF-PTe------------------------QGLFVA 210
WP_043578017 131 GAFthqpgggrfe-------sqgepripsdILHavhEDprlvpVAL-PIg------------------------SGLLAI 178
WP_104913964 158 RVLaggaiadpaa-------rehkvaamraVLKtvaEDdrvshTLL-PMa------------------------EGLLWA 205
WP_053961547 156 NSLaggrflesmdpaeatnadddaavaaatLADmlaETedfdaFRI-PLd------------------------AGMTVA 210
WP_065247511 166 NVMhhdrlgnpta-------ndpqtirireVVAglnERedlvvSMS-PAg------------------------DGVLTA 213
WP_006289949 175 DLMalsnpgnkggvvn-padrtsqtvamrdLVAqlpEDedfssVLL-PIg------------------------TGLFFS 228
WP_011096148 154 HALwqgkvaspvy-------kdepeisfraLIHevvNSetfvsCLS-PIg------------------------DGILTV 201
WP_003850980 175 DTLldgtvadstr-------kdretvaareADDyvrNLdqvvvCRL-PLg------------------------GGTTLI 222
WP_012178614 235 --------RK-AA 238
NP_600347    211 --------TK-A- 213
WP_013349508 211 tvlpakagVKr-- 221
WP_043578017 179 --------AR-T- 181
WP_104913964 206 q-------VHtEN 211
WP_053961547 211 --------RR-K- 213
WP_065247511 214 --------VK-AR 217
WP_006289949 229 --------VR-R- 231
WP_011096148 202 --------TKpK- 205
WP_003850980 223 --------TK-L- 225
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