6OJB


Conserved Protein Domain Family
Glyco_hydro_114

?
pfam03537: Glyco_hydro_114 
Glycoside-hydrolase family GH114
This family is recognized as a glycosyl-hydrolase family, number 114. It is endo-alpha-1,4-polygalactosaminidase, a rare enzyme. It is proposed to be TIM-barrel, the most common structure amongst the catalytic domains of glycosyl-hydrolases.
Statistics
?
PSSM-Id: 460963
Aligned: 152 rows
Threshold Bit Score: 75.7877
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
6OJB_A           59 WQ--IELLyalndtsVD-AEIYD---IDLF----IND-----KSTIAG--LQRAG--RKVICYFSAGSYENWRP-----D 114  Aspergillus...
WP_013236174     57 FY--YGVnp-----pLAdLQAFDvavVEPEfvrnPAArtraaADGMH-----------QLFAYVSLGEVQPSRPyyk-ql 117  Herbaspiril...
CAS:CtCNB1_0691  29 iY--YGAka-----sLSeLGLYDiavVEPD-------------HGYDPqrLRDQApgSELYAYASVAEVLPERAyfk-kl 87  
Q1LFQ4           40 FH--YGArp-----pVDmLQAFDvavVEPD-------------SGFDP--RSARTpnTAWFAYVSVGEVLPSRAyfk-di 96   Cupriavidus...
ACR31560         88 LY--YGAhp-----pVElLSAYDaavVEPD-------------SGFDP--LAHPLphTTWFAYASVGEVLPSRAyyp-ai 144 
jgi:Bphy_5290    52 LY--YGKtp-----pVEmLSAFDaavVEPD-------------SGFDP--LAHRLphTTWFAYASVGEVLPSRSyya-dl 108 
WP_015868072     27 FAvyYGtg------nFEkLKNFDltiVAPGty---------sADQLDE--MVKAG--KYPVVYISVGELAPGDPayfsiN 87   Kosmotoga
WP_015852560     22 WAc-YYGSed----rTDeLSGFDllvADPGg-----------QDP-TP--LRAKG--VKVLTYISLGEVAAKGPyyeeaK 80   Maridesulfo...
Q2G7W2           34 WAvdYGAKtd----pALaRQ-FDllvLEPDh-----------ARPIEA--LRGPG--AKLLGYLSLGEVEQARPyvgrlR 93   Novosphingo...
CBS88497         61 WAv-YYADaa----pLSaFQPYRllvLDSRt-----------HPPLQP--LADRG--KTLFGYLSVGEVETHRPwfgrvK 120 
6OJB_A          115 KDKF-----KDsdlghdlddWPGEKWLNIS-----SanvrqIMLDRLDMARDKGCDGVDPDNVDGYdndngldLTQADSI 184  Aspergillus...
WP_013236174    118 PPGLlrgdnAA---------WGSRV-IDQNapgwrDf----FLDKIIAPLWAQGWRGFFLDTLDSYql---faKTDAERA 180  Herbaspiril...
CAS:CtCNB1_0691  88 PAAWqmarnGA---------WRSIV-IDQTpaqwpEf----FAQQVIAPLWEKGYRGFFLDTLDSYrl---aaHFDE--A 148 
Q1LFQ4           97 PQAWlsgsnDA---------WNARV-VDQAadgwpAf----YVDKVITPLWERGYRGFFLDTLDSYhl---vaKTDADRA 159  Cupriavidus...
ACR31560        145 PKSWfagsnAT---------WASRV-IDQSqpqwpAf----FVDQVIRPLWEKGYRGFFLDTLDSYql---aaTTDEARA 207 
jgi:Bphy_5290   109 PKSWlagrnES---------WASRV-VDQSqpewpAf----FVEHVIKPLWDRGYRGFFLDTMDSWql---vaQTDDARA 171 
WP_015868072     88 PKDLgtv----------neiWGSTR-VAASsra-----wrdIVIRRIRSQLERGFTGIFMDTVDSNp------------- 138  Kosmotoga
WP_015852560     81 HLNLlvrynEN---------W-DSWVVDVRrpewsEl----LFARIIPDALSSGYDGLFFDTLDSPidm--qrRDPDTYK 144  Maridesulfo...
Q2G7W2           94 KAGAliaanPN---------WPDARMVDLRhalwtSl----VVEEIIPAILAKGYDGIFFDTLDNAeam--qhADPVKMA 158  Novosphingo...
CBS88497        121 GWGIldqenPN---------WPGSFYVDVRdrrwvKl----VVEELVPAILREGFHGVFLDTLDNPphl--erTEPKRWR 185 
6OJB_A          185 SFVNFLANAAHA------R-------NMSIGLKNAgdiipsviKNMQWSVNEQCAqynecd------------------- 232  Aspergillus...
WP_013236174    181 VQTQAMIATLREfkrrypEaklilnrGFELLPEIA--------PLTYAVAAESLYrgydagrrsygpvkd-ndrawlmgq 251  Herbaspiril...
CAS:CtCNB1_0691 149 AQQDGLVRVIDTlhsrfpGiklilnrGFEIVPRVR--------DKIQMVAAESLYrgwdanlkryvevpa-kdrdwllqq 219 
Q1LFQ4          160 RQEAGMVRVLQAikarypDakllfnrGFEILPQVH--------SLAYGVVFESLFrgwnqaqgtytevsq-qdrdwllnq 230  Cupriavidus...
ACR31560        208 RQQAGLVAVIRAirarypQaklilnrGFEIMPQVH--------DQIYAVAFESLYhgwnqaqrryvavpq-adrdwllgq 278 
jgi:Bphy_5290   172 RQMEGLANVIRAikahypDaklifnrGFEILPEVH--------DLVYAVAFESLYrgwdqtrqrytqvpe-qdrtwllaq 242 
WP_015868072    139 DGVGAMADFIREirdtfpDmiiiqngAFDRLEKTG--------KYIDFVLWESFAttfnfntaryekafi---ddllikr 207  Kosmotoga
WP_015852560    145 GTERSCVALVRAirekfpKmllcqnrGFEIVRRTA--------PYINYLLIEGLSssmdletstrkdvseadrsflvgka 216  Maridesulfo...
Q2G7W2          159 GMVDAAAALVRAirarfpPitlmmnrGYALLPAVA--------PHVDVVLGEAMAskwdfakkayvrttpsdwewqaarl 230  Novosphingo...
CBS88497        186 GMTDAAAALVRAirrnwpDigltqnrAYEILPQTA--------PLLTHVLGESVYagwdfaarrphrqsaedyrfqveal 257 
6OJB_A          233 tyavfPQNGKPVFHIEYpkgdktnndlsvTASQK---NAACD----FAGSANFSTVIKNM 285  Aspergillus fumigatus Af293
WP_013236174    252 mqtareRYHLPVIAIDY------------VDPQQsgaRALARetaqKISADGFIPWVADG 299  Herbaspirillum seropedicae
CAS:CtCNB1_0691 220 lqtireRDKLPVLAIDY------------VAPHD---RDTTRataqRIAQLGIIAWVSDA 264 
Q1LFQ4          231 arivreQYGLPVISIDY------------CPPTD---AQCRRdtarRIGALGITPYVTDS 275  Cupriavidus metallidurans CH34
ACR31560        279 artiraQYGLPVISIDY------------CAPGD---SACSRdaieRIRADGLVPFVTDG 323 
jgi:Bphy_5290   243 aktireQYHLPVISIDY------------CAPAD---RACRQdtvaKIRAQDIVPYVTDG 287 
WP_015868072    208 vqqlskkdGFGVLSLSY------------AAPED---KELRTfarnFARKCGFIPYVSTL 252  Kosmotoga
WP_015852560    217 nsalkANPKLVVLTLDY------------VPAGE---KLEISkaydFSRSLGFIPYVSTP 261  Maridesulfovibrio salexigens
Q2G7W2          231 reaklANPALRLTVLDY------------WDEAD---RDTVAalyhCEREAGFHPYVATL 275  Novosphingobium aromaticivorans...
CBS88497        258 kaagaSNPRLGLLTLDY------------WDPAD---TAGVRaiydLQRANGFSPYVSTV 302 
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap