Conserved Protein Domain Family
PRP40

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COG5104: PRP40 
Splicing factor [RNA processing and modification]
Statistics
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PSSM-Id: 227435
Aligned: 3 rows
Threshold Bit Score: 504.614
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
19115878  20 NQEGPSAAPSKTVASDWHEVKTEDSRVYYYNSVTRKSVWEKPEELMNDFEKKLSKLAWKEYATADGKKYWYNVNTRESVW 99  fission yeast
19173192   1 MQAALLGMASGEARVEYEVLAAPDGRIYYYNKRTGESSFSKP-DVLKGSDEDFDVDPWIECRSKRGRVFYHNSITRESRW 79  Encephalitozoon cun...
465672     1 -------------MSIWKEAKDASGRIYYYNTLTKKSTWEKPKELISQEELLLRENGWKAAKTADGKVYYYNPTTRETSW 67  baker's yeast
19115878 100 DIPDEYKAalVDEPEQQKKALSSKIKSNDNKPAVQSIQRHgpdvaapssQPAKDQSQQISQGSHKRTINFVQQKdkrqkr 179 fission yeast
19173192  80 KRPPERKK------------ERTMIGGVGMDMRITDHETS-----------KYLLGRLMEQYGITSTKDAFYRL------ 130 Encephalitozoon cun...
465672    68 TIPAFEKK--VEPIAEQKHDTVSHAQVNGNRIALTAGEKQ---------EPGRTINEEESQYANNSKLLNVRRR------ 130 baker's yeast
19115878 180 sndyqhenydTYEAAERAFFKFLDSHNVNPSWTWEQTVREL--CDAKGYYVMKDPWHRKCAFDAYILNYLTDQSDAEKNR 257 fission yeast
19173192 131 -----------------------------STEPIFRAIEMG-----------T----RKDLMKKYFEEQEKSAREEDEQK 166 Encephalitozoon cun...
465672   131 ----------TKEEAEKEFITMLKENQVDSTWSFSRIISELgtRDPRYWMVDDDPLWKKEMFEKYLSNRSADQLLKEHNE 200 baker's yeast
19115878 258 VTKIRKEFIEMLKSSDKIHSYTLWRTVKNEFSSHPAFN-ATSSETEQQQLFFEYKQKLLEDEKQLEKDRRKEALDDFCSL 336 fission yeast
19173192 167 QRYYINEVCKVDAG------VSDFFGFNSIFSKHPYYS--------------KIKDKFGCYEVYVGRHMGGTTPGRLEEV 226 Encephalitozoon cun...
465672   201 TSKFKEAFQKMLQNNSHIKYYTRWPTAKRLIADEPIYKhSVVNEKTKRQTFQDYIDTLIDTQKESKKKLKTQALKELREY 280 baker's yeast
19115878 337 LRNMN----FEPYTRWS--VAQAKFDQDPRYTRNSNMKYLSKLDALVAFEDHVKHLEREYILDKQKQKKEKHRIERKNRD 410 fission yeast
19173192 227 FRSLG---------IGL-------SSSVVDVLKMKEMEPFDRKAILFSFIRYFRRLEKELLSAIEERKAAAAQNAQHHKN 290 Encephalitozoon cun...
465672   281 LNGIIttssSETFITWQqlLNHYVFDKSKRYMANRHFKVLTHEDVLNEYLKIVNTIENDLQNKLNELRLRNYTRDRIARD 360 baker's yeast
19115878 411 AFRALLQDLRVQKKITLRTKWKELYPIIKDDPRYLNLLGQSGSTPLDLFWDTIVDLENMYREKRNLVLDCLEVLQISVDD 490 fission yeast
19173192 291 EFRTLLRKLYSEGLIYYRMKFKNAFHLFKDSESFLNLLG-TTESPKEVYFDFINDLENRLG--R--YERE-RTGKISPTD 364 Encephalitozoon cun...
465672   361 NFKSLLREVPIKIKANTR--WSDIYPHIKSDPRFLHMLGRNGSSCLDLFLD-FVDEQRMYIFAQRSIAQQTLIDQNFEWN 437 baker's yeast
19115878 491 TSNIPEIIARLSEKLkdrEESEAVTEDLIEEVVNRLRDKAIHKKAEEkraderrIRRKIDNLRSAIKYLKppisadasyd 570 fission yeast
19173192 365 RRAVDRYFEAIAEEK---EEGEI--------------------------------------------------------- 384 Encephalitozoon cun...
465672   438 DADSDEITKQNIEKV---LENDRKFDKVDKEDISLIVDGLIKQRNEK-------IQQKLQNERRILEQKK---------- 497 baker's yeast
19115878 571 eirPLISILPEFAALHSEEHRMAAFDKYIRRLREKRELEKQYqnrrgyydvgkDEsylANSARphSGYEDGRLEYSADLA 650 fission yeast
19173192     --------------------------------------------------------------------------------     Encephalitozoon cun...
465672   498 ---HYFWLLLQRTYTKTGKPKPSTWDLASKELGESLEYKALG-----------DE---DNIRR--QIFEDFKPESSAPTA 558 baker's yeast
19115878 651 SKSNRNEINTMQDVQensisHVTatqPAVKNIV 683 fission yeast
19173192     ---------------------------------     Encephalitozoon cuniculi
465672   559 ESATANLTLTASKKR-----HLT---PAVELDY 583 baker's yeast
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