Conserved Protein Domain Family
ANTH_N_AP180_plant

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cd16987: ANTH_N_AP180_plant 
ANTH (AP180 N-Terminal Homology) domain, N-terminal region, of plant Clathrin coat assembly protein AP180 and similar proteins
This subfamily is composed of plant clathrin coat assembly protein AP180 and other ANTH domain containing proteins that are yet to be characterized. Arabidopsis thaliana AP180 (At-AP180) is a binding partner of plant alphaC-adaptin; it functions as a clathrin assembly protein that promotes the formation of cages with an almost uniform size distribution. In addition to At-AP180, Arabidopsis thaliana contains many ANTH domain containing proteins labelled as putative clathrin assembly proteins included in this subfamily such as At4g02650, At5g10410, At2g25430, and At1g33340, among others. ANTH domains bind both inositol phospholipids and proteins, and contribute to the nucleation and formation of clathrin coats on membranes. The ANTH domain is a unique module whose N-terminal half is structurally similar to the Epsin N-Terminal Homology (ENTH) and Vps27/Hrs/STAM (VHS) domains, containing a superhelix of eight alpha helices. In addition, it contains a coiled-coil C-terminal half with strutural similarity to spectrin repeats. It binds phosphoinositide PtdIns(4,5)P2 at a short conserved motif K[X]9[K/R][H/Y] between helices 1 and 2. This model describes the N-terminal region of ANTH domains of plant clathrin coat assembly protein AP180 and similar proteins.
Statistics
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PSSM-Id: 340784
Aligned: 39 rows
Threshold Bit Score: 110.021
Created: 6-Jan-2017
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative
Feature 1:putative PtdIns(4,5)P2-binding site [chemical binding site]
Evidence:
  • Comment:PtdIns(4,5)P2 = phosphatidylinositol-4,5- bisphosphate
  • Comment:partly based on the binding of Rattus norvegicus CALM N-terminal ANTH domain to inositol 1,4,5-triphosphate
  • Comment:ANTH domain containing proteins bind to PtdIns(4,5)P2 via a lysine-rich motif, which is only partially conserved in this subfamily

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1           #          # ##                                                           
Q9ZVN6     36 LEVAILKATShdeevPIDDRLVTEILGIISskksHAASCAAAIGRRIgrtrNWIVALKSLVLVLRIFQDGDpYFPREVLh 115 thale cress
EYU30218   33 IEKAVIRATShh-dsSFDRRSVDRVCEWLRlspfNLKPILWSISNRMentrSWVVALKGLHLMQTLTNCRTpAVKKIGRl 111 spotted monkey flower
KEH40728   36 LETLIIKATShd-eqCMDYKNVQRVFQWLRtsplYLKPLLCGLSMRIqrtrSWVVALKGLMLTHGVYSFDLpMVQSMGRl 114 barrel medic
EPS63139   33 IEKNVIRATAhn-glVIDPRAVDRVRRWLAispaNLKPLLWAISSRVdktaDWIVTLKSLYLIHILINTQLpSVARIGRl 111 Genlisea aurea
ACG25389   42 LEAAVIRATShe-drWMDYRSAARVFAWARssptFIRPVMWALARRArrtrCWVVALKSLMIAHGILLRSG-RAPRAGRv 119 Zea mays
BAJ96932   43 LDAAVIRATShd-drFVDRGAAARVLDLARa--sSPSPLVWALARRAgrtrCWAVALKALMLAHRLLLLAQ-PRAGGRV- 117 domesticated barley
Q9SHV5     29 FTAAVIKATShn-dvSMDIENVQFIYRYIQsnpsSFKPIIRAVSLRVehtrNWTVALKCLMLLHGLFFSGImTVDSIGRl 107 thale cress
Q9FRH3     33 LDSAIIHATShd-dsSVDYHNAHRVYKWIRsspaNLKPLVHALSSRVnrtrSWIVALKALMLVHGVLCCKVtSLQEIRRl 111 thale cress
Q9C9X5     34 LEAAIIKATShd-dsSVDYSNAHRVYKWIRssplNLKTLVYAISSRVnhtrSWIVALKSLMLLHGVLCCKVpSVVGEFRr 112 thale cress
Q9LQW4     24 LTAAVVKATShd-elSIDTESAQFIYRHVLsspsSLKPLVSLISSRVkrtrSWAVALKGLMLMHGFFLCKStVAESIGRl 102 thale cress
Feature 1                                                   
Q9ZVN6    116 amkrgakILNLSSFRDDsns---cpWDFTAFVRTFALYLDERLDCF 158 thale cress
EYU30218  112 -------PFDLSNFSDAhgra-aktWPLNAFVRAYYAFLDQKSTVV 149 spotted monkey flower
KEH40728  115 -------PFDLSHFSDGhlsp-ekgWVFNAFVRSYFAYLDQRSVIL 152 barrel medic
EPS63139  112 -------PFDLSGFRDGhipq-lkaWPFNGFIRAYYAFLDHKSVVV 149 Genlisea aurea
ACG25389  120 -------PFELADFRDRsssaaarsLAFSAFVRAYFRFLDYRSLFA 158 Zea mays
BAJ96932  118 -------PFDLADFRDRs------sAGFSVLVRAYFRFLDARSLFA 150 domesticated barley
Q9SHV5    108 -------PFDLSGFGRRksrf-srtGRFNIFVRAYFMFLDERSILY 145 thale cress
Q9FRH3    112 -------PFDLSDFSDGhsrp-sktWGFNAFIRAYFSFLDQYSFFL 149 thale cress
Q9C9X5    113 ------lPFDLSDFSDGhscl-sktWGFNVFVRTYFAFLHHYSSFL 151 thale cress
Q9LQW4    103 -------PFDLSSFGEGnsrimsksGGFNLFVRAYFAFLDRRSILF 141 thale cress

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