Conserved Protein Domain Family
VirD4

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COG3505: VirD4 
Type IV secretory pathway, VirD4 component, TraG/TraD family ATPase [Intracellular trafficking, secretion, and vesicular transport]
Statistics
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PSSM-Id: 442728
Aligned: 573 rows
Threshold Bit Score: 107.378
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
YP_003610949 188 HMLVIGTTRVGKTRLAELL---Itq---dI-Rr--T-----NaageheVVIVFDPK-G---Da-dLLRRMYAES---HRA 245
WP_012863996 201 HILVFGASGSGKS-VLLSQf--Lnq---iN-Ty--SqkyndKr-----HYIITDVK-P---E---FVG---KFA---Ep- 252
WP_041464718  47 HVLYLGGIGTGKTVGISAL---VasvrasM-Ta--D-----D------VMVVFDTK-G---D---YHE---TFH---RP- 95 
WP_013157048 162 GTLVVGKPGGGKTTGYYQPn--Ll-----L-DardG-----W------SAVVFDLKwP---DeggLM-EAVRYY---RHF 215
WP_013159889 175 HSITYAGTGGGKTVGSFRPr--Ia-----L-DaaeG-----N------IAVVLDTKyP---NpndSYvDMRDYF---RAF 229
WP_013449770 171 HVLVEAGTGEGKTSTYVMSl--A------IsAahhR-----Q------GMIAWDQKyG---EpsgLVDVLP-IF---RHF 224
WP_008413574  37 SLLTLGASGAGKSETLKHF---Vdq---lQ-Ne-pN-----E------PVVVYDHK-T---D---YQ----EFL---EEr 83 
WP_008413574  37 SLLTLGASGAGKSETLKHF---Vdq---lQ-Ne-pN-----E------PVVVYDHK-T---D---YQ----EFL---EEr 83 
WP_079239499  47 HVLYLGGIGTGKTVGMSAL---IrsvresM-Ta--N-----D------VMVVFDTK-G---D---YHG---EFA---RQ- 95 
WP_010037025  21 GIRFIGSPGSGKSVMLKALratLat---iI-KnrpD-----Y------DILAVDf-dGgkrD---LYE---IFRlfpQw- 77 
YP_003610949 246 GrqDNFWVFHLG---WP----DISARYNAVG---------RfsR-ISEVASRVAG-QLSGE---GNsaAFREFAWRFVNI 304
WP_012863996 253 ---DDY-IFCPF---DK-----RSISWSIFNdi------dDisD-YDTFASILFE-Qe-----gAKdpFWGLAAGAIFAD 307
WP_041464718  96 G---DAVIAATLa--DEf---AGQVSWNLFEefralppgrlpeDeIFEMCSGLFS-RLIADa--GDnaYFANAARDVFTA 164
WP_013157048 216 G--RAVYAYTPF---TA-----DSARIALLEga------eNpqE-ASNIADILVP-----RgadGGaeFYANLERMLLAG 273
WP_013159889 230 G--RQVTVINPF---EL----GDGIQIPVLTev------kGygQ-ALDVARLIYPpDLEAge-dPGakVYISNARLLLAG 292
WP_013449770 225 E--RPVYTYAPY---D-----PDTPRIPLLDmv------vDymT-ATKLAEALIA-PAKEEsv----dFYRDIDREMFAV 282
WP_008413574  84 G--VDMIRLSSG---GStggdGSEIAWNIFEei------eHeeD-ADELARALFP-EQn-----Gd--FWNAAGRQLFAA 143
WP_008413574  84 G--VDMIRLSSG---GStggdGSEIAWNIFEei------eHeeD-ADELARALFP-EQn-----Gd--FWNAAGRQLFAA 143
WP_079239499  96 G---DVVVAGADa--ESy---PEHRFWNLFQefaglpaghaaeDeIFEMCNGLFA-NLLETg--GDnvFFVQAARDVFTA 164
WP_010037025  78 ---APVFDLNPFlwgDR---------YDFMGdl------eDprD-IAQMAANIIE-VREKD----SqpYFPQAAQHVFRA 133
YP_003610949 305 ITRALvaL-----G-QrpD-YGLILRYV---TnigelyetyvdnllsekapqlmntTEAmMqsgISdkdlprhlqgrpng 374
WP_012863996 308 GLKYL--Dl---qG-Rk-T-NRDILEFF---Kqst-------------------eyLTE-A---IN-------------- 339
WP_041464718 165 LVTAM--Yre--sE-Er-Sn-cDIRMIVggmGts---------------------eMHA-L---LD-------------- 198
WP_013157048 274 LIWVEgq-----eG-Ry-S-LRHILEVL---Rqgk-------------------eeLKA-Y----A-------------- 304
WP_013159889 293 IIYG---LslgprE-Ar-N-FREVYQVA---Nlgm-------------------egVRQ-W---FN-------------- 326
WP_013449770 283 AALAValIar-aeG-Ra-ArMSEIVELF---Ntgdpkqv-----------advlqeASR-Y---AT-------------- 327
WP_008413574 144 TLKYI--Rre-vvGpD--N--ADLVRYW---Ertv------------------pekMHEk----LT-------------- 177
WP_008413574 144 TLKYI--Rre-vvGpD--N--ADLVRYW---Ertv------------------pekMHEk----LT-------------- 177
WP_079239499 165 LVTAM--Fre--sD-Al-Tn-eDLRSRIgsmSvp---------------------eMQE-L---LD-------------- 198
WP_010037025 134 AMLRHw-Lvt--pG-Ra-T-TRDV--FL---Sgms------------------annIRR-V---IG-------------- 166
YP_003610949 375 vKIWvseqvlgSpeGkklwDPV-LDGLRSAv------QYDRTYFD--KI---VASLLPL---LEKL-TTG---KTAALL- 434
WP_012863996 340 ------------------------SLPPTLitskqylNAPDNTFT--SI---LATLASG---LKPFmHLKdstDN----- 382
WP_041464718 199 -RPE-------N---------AdLRGARHYi-------AKEG--Sn-ST---MATMAFMqqvIQE--------SFRSSF- 239
WP_013157048 305 -EVR---------------PHL-KERIGAVl------QTREDIIA--GV---VAGLAGR---LALF-END---HLDRSSl 349
WP_013159889 327 -GRP-------Q---------A-ADEIRSTl------ETDKKIFS--GA---INRLVED---LTIF-RLE---SAVETF- 369
WP_013449770 328 -SPA-------N---------D-PWKWGRVi------FGEESKIR--GVpeyMRSLRKK---IAVFlEDP---NVDRAT- 374
WP_008413574 178 -Rdg------hEd--------L-AAAASAi------nPETERQAG--SV---FATAQQQ---VTDL-------FVGDFA- 219
WP_008413574 178 -Rdg------hEd--------L-AAAASAi------nPETERQAG--SV---FATAQQQ---VTDL-------FVGDFA- 219
WP_079239499 199 -RPA-------N---------AdLRGARNYi-------AAEK--Sp-TA---QASVAYMqqvIQE--------SFRSAF- 239
WP_010037025 167 -SHP-------Q--SrhalPLV---------------N---RTESglSV---ISTLMNE---VGKYe------YVASLWd 206
YP_003610949 435 -ApdytDlDDprpiLDWHNIi--K--SR--G----VVY-VGLDALSDp-VvAAAVGNSM--FADL--VSEGgHIy--KfG 495
WP_012863996 383 ------N-TP----FSFKQYireEyqRT--DgtipNLY-LLVPANRQr-I-MAPLLSLV--MDIMi-NEAL-TLp-eS-- 439
WP_041464718 240 -G----RpGD----FSIRAFlraK--GA--R----ALF-LEYDIASGs-T-LAPVFTTM--LDVAm-KEAM-SR---R-- 290
WP_013157048 350 pG----A-GA----VPWPRLf--S--EP--S----LLY-IGIPQEHLe---GGKATALLwlVKRImdREIH-RAa-aRnG 404
WP_013159889 370 -Spg---pRE----VDLSRVl--L--TP--G----MIH-LVLPESYIrgSsGRAILRFF--KRYLd-GRML-SLa-eRlT 425
WP_013449770 375 -SrgapG-EN----LSLTTIf--E--KP--S----LLY-IGLPKTKVmsVsNKVLMRLL--KIWId-DGLY-QAaveNhG 433
WP_008413574 220 -K----S-GE----FSIREYm--Q--NPdgR----VLV-LDYPTRQSg-T-IAPVFRYL--IDQAi-MHGM-D----Dp- 269
WP_008413574 220 -K----S-GE----FSIREYm--Q--NPdgR----VLV-LDYPTRQSg-T-IAPVFRYL--IDQAi-MHGM-D----Dp- 269
WP_079239499 240 -G----RpGD----FSIRQFvraK--GA--R----ALF-LEYDVASGg-M-LAPVFKTM--LDVAm-KEAM-SR---Q-- 290
WP_010037025 207 -S------NDrgrtVTIRSFl--K--QRf------ALLsLPYDDKSVa-T-LAAVVRYL--LVVLq-QRAL-STv-vR-- 260
YP_003610949 496 lgdeeegKsaKVAINLHCDEFNEL---MgDEFIPLINKGGGAGFQVTAYTQTLSDIEARIGSTaK-ANQVVGNFNTLVML 571
WP_012863996 440 -------Q--NCRLYFIIDEIGSVn-kI-QLLPDLITKGRSYGISILALTQDPGLLREKYGPQ-V-MQSFLNNFGTQIVL 506
WP_041464718 291 -------Ra-GGRVFFVLDEFALLp-eL-THLSDGVNFGRSLGLRFIVGTQNVKQVQEMYGPE-M-AASVLSAFGSVFAF 358
WP_013157048 405 g------Tl-KTLTSVYLDEFTAFg-kL-PGIEDNLKTMRSRGAAFHVSVQNLANGRSVYGRD-V-WESIQGTFGQQVYL 473
WP_013159889 426 r------Pl-PVHINYYYDEFALFg-fL-PNLNDDLATLRSRNISLHMALQNRSQAINIYGEH-GwAATVDNNIGTTVIL 495
WP_013449770 434 g------El-PYLTHYVLDEFQNFg-eL-PHISEGLALFRSMNVAFHIIIQDRAAIESIYGPE-GlKELTGNNTGTKIFY 503
WP_008413574 270 ----------GRSAYYLLDEIEHLdatI-KRLGELINVGRGVNCQAILSLQSIAQLEDTYGKE-R-AHALLSGMVTVIGL 336
WP_008413574 270 ----------GRSAYYLLDEIEHLdatI-KRLGELINVGRGVNCQAILSLQSIAQLEDTYGKE-R-AHALLSGMVTVIGL 336
WP_079239499 291 -------Rt-AGRVFFVLDEFALLp-eL-THLTNGLNFGRSLGLRFIVGTQNIKQVEAMYGNE-M-AASVLSAFGTVFAF 358
WP_010037025 261 ----------NRYLLLLLDELALLpg--gINLDLTLVKGRETGICPLFAYQSHSHCRTVHGKE-K-FDAMTGLMKTTIVL 326
YP_003610949 572 --RVR-EKNTAMLLTDQLPE--VDVYQK-TLT-SGVtdvsrpgegtdfnS-----NVN-D--QVSLVK-VPMIRPADIIN 635
WP_012863996 507 --RIN-DATTAKELADNFGV--EEIIEY-KES-IQL-------------PqngspIPS-I--SQDTTT-KSLILPSQLQS 562
WP_041464718 359 --RLY-DGDSRRFVGDRFGA--NRKLTRfDASvRGS-------------G---------L--REEViT-GAVVEDWDLSS 408
WP_013157048 474 leRL--SEEDRKWLARTLGY--ETVVGY-SRS-SSRs------------Gfl-sgSEG-E--GEREEA-RFLLSAEEMRE 530
WP_013159889 496 p-G-SfTQNDAKYWSETLGE--VSIEQY-SIG-ETQvpe--------alGkk--iNRS-L--NVKEER-TALINIDELQR 555
WP_013449770 504 v-G-GlGDKAREDLEKAVGD--KVIVEE-ALM-RQLspv--------heV-----EAK-Q--TRRLGK-KPVYSREEMQR 560
WP_008413574 337 --RTA-DEESVDFLRETIGTsfEQYTRN------A--------------Gs----DRTpR--ENEEKE-EYQFAKGDLRN 386
WP_008413574 337 --RTA-DEESVDFLRETIGTsfEQYTRN------A--------------Gs----DRTpR--ENEEKE-EYQFAKGDLRN 386
WP_079239499 359 --RLY-DGDSRDFVRGRFGK--NKKVARfDSNvRSK-------------G---------I--NESIiD-GYVVEDWDLSS 408
WP_010037025 327 --NQP-SREDAEYCAKVFSD--QQGFMKf-NS--AQg------------Gk----NPS-TgwSEQLTTvEN-VTAAMIQS 380
YP_003610949 636 LP-K--GQAFALLEGGrlwkirMPL--PADN--------------------------N---------------------- 662
WP_012863996 563 LP-P--FKGYGKILGFn------PFnlVIPQlffs-------------------enpNikhfdpid------------rk 602
WP_041464718 409 LGv---GTCIAAIPDG------PPVsgsgsrrrrrrrrprrgrtagqssgephravgsiasrgarlsmrdaseqahdreg 479
WP_013157048 531 VK-K--GETVVILDGK------PPVrtylgg---------------------mwekrHplyglyekarkaarkestppvs 580
WP_013159889 556 ME-L--GELIAVVRGF------PPI--RLRSypvefpasqgnpiawiyeyvsawkkaHlrealqngw------------l 612
WP_013449770 561 AE-Q--GTVLAKMHYV------PFV--IYQAvlld-------------------dprHplhrnwasikqn----alayar 606
WP_008413574 387 FD-P--GEAVICRQGSgwv------------------------------------hgQiqllee---------------- 411
WP_008413574 387 FD-P--GEAVICRQGSgwv------------------------------------hgQiqllee---------------- 411
WP_079239499 409 LPv---GCCIAALPDH------APVrfqyapprkv--------------------------------------------- 434
WP_010037025 381 LPvPtpATPFI--EGFmv---tLPFrpfr-------------------------frvRipdll----------------- 413
YP_003610949 663 ------DPHMPASLKHLAdsmekNY 681
WP_012863996 603 tvnsfkPNIQPHRIKfne---ykEH 624
WP_041464718 480 gpmhvvplgyigefegkpnlalldp 504
WP_013157048 581 qpetvtGGAAPMQDEclavatggqr 605
WP_013159889 613 eeawrllsAAPPPeevqapppapep 637
WP_013449770 607 ewkahySERGDENANGRSeq--dAS 629
WP_008413574     -------------------------    
WP_008413574     -------------------------    
WP_079239499     -------------------------    
WP_010037025 414 --kalvPTVAPQAPPAPrdpkdfll 436
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