1S5L


Conserved Protein Domain Family
PS_II_psbM
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TIGR03038: PS_II_psbM 
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photosystem II reaction center protein PsbM
Members of this protein family are the photosystem II reaction center M protein, product of the psbM gene, in Cyanobacteria and their derived organelles in plants. This model resembles pfam05151 but has cutoffs set to avoid false-positive matches to similar (not necessarily homologous) sequences in species that are not photosynthetic. [Energy metabolism, Photosynthesis]
Links
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Statistics
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PSSM-Id: 274403
Aligned: 28 rows
Threshold Bit Score: 40.7089
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
1S5L_M         1 MEVNQLGLIATALFVLVPSVFLIILYVQTESQQ 33  Thermosynechococcus elongatus
AAO43193      66 LEVQYGAYLAVALGTLLPCLFLINLFIQTESRK 98  Phaeodactylum tricornutum
ZP_01123310    1 METNDLGFVASLLFVLVPTVFLIILFIQTNSRE 33  Synechococcus sp. WH 7805
WP_019477098   1 METTNFGFIASLLFVGVPTIFLIGLFISTSDGE 33  Prochlorococcus
WP_017317247   1 MQVNDLGFVASILFVLVPSVFLIILYIQTASRE 33  Mastigocladopsis repens
WP_025914166   1 METTNFGFIASLLFVGVPTIFLIGLFISTQDGE 33  Prochlorococcus sp. scB245a_520K10
WP_006195024   1 MQVNELGFVASILFVLVPAVFLIVLYIQTASRE 33  Nodularia spumigena
WP_011294327   1 METTSFGFAASLLFVGVPTIFLIGLFVSTSDGE 33  Prochlorococcus marinus
WP_010871338   1 MQVNNLGFIASILFVLVPTVFLLILFIQTGKQS 33  Synechocystis sp. PCC 6803
WP_011128838   1 METNDLGFVASLLFILVPAIFLIVLYIGTNRSE 33  Synechococcus sp. WH 8102
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