2CCZ,3K8A,3EN2,3FHW


Conserved Protein Domain Family
PriB_gamma

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TIGR04418: PriB_gamma 
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primosomal replication protein PriB
Members of this protein family are primosomal replication protein N (PriB), virtually always encoded between rpsF (ribosomal protein S6) and rpsR (ribosomal protein S18). Note that only this short form, as found primarily in the gamma-Proteobacteria, of the single-stranded DNA binding protein family (see model TIGR00621) may partner with PriA and be involved in priming for re-initiation of replication. [DNA metabolism, DNA replication, recombination, and repair]
Statistics
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PSSM-Id: 275211
Aligned: 40 rows
Threshold Bit Score: 91.1096
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2CCZ_A         9 NRLVLSGTVCRAPLRKVSPSGIPHCQFVLEHRSVQEEAGFHRQAWCQMPVIVSGhE-NQA-ITHSITVGSRITVQGFISC 86  Escherichia col...
WP_005598106  14 NCLILSGSVASTVKQSQNPLGVPNYRFWLEHRSIQTEVNLERQAWCKIQVILNG-NqFSL-ITQQIKLGDKIRVYGFIHT 91  Actinobacillus ...
WP_011329090   2 NQLVLSGVVCKTPKLSQSPAGIPHCIFVIEHKSMQTEADLNRNSYVRLQVVASGkQ-MQQ-QTQHLHVGQALQVSGFLNR 79  Pseudoalteromon...
WP_011041277   7 NCLVLIGEVVRTPKQSTSPAGISHSQFSIDHKSIQNEAGMNRQAFVRIQVVATG-D-LSH-LTRELIAGNVVKVTGFINR 83  Colwellia psych...
WP_011235167   2 NRLHLTGTLGKVPKLETSPSGIEHLQLVIEHRSMQPEAGMNRQSYVRIQVVLSG-EgLQH-WLEKLTVGCEVLAEGFLHR 79  Idiomarina loih...
WP_001905464   8 NRIELSGVVAKALVRSQSPSGVKHCHFWLEHRSTMVEADLPRQVFCRLPVVVSG-A-RSEaLTQNLVQGSSILVSGFLAY 85  Vibrio cholerae
WP_011628332   8 NRVIFTGVLVDRVSLRESPAGIPIARFALDHQSAQSEAGVPRSQMLRVGVRAAGkA-LCQ-GLDRLPAGTPLEVRGYLAR 85  Alkalilimnicola...
WP_011073673   4 NNLVLSGTITRSRRFK-SPAGIAHSVIMLEHKSQRYEADMLRNVYVQIQVILSG-PrFES-VADNLKAGVEVQVQGFMTL 80  Shewanella
WP_011589467   4 NHCELTGVIVTLEKVALTPAGVPRQRIWLEHRSRQLEDGHPREVQARIAVILAG-G-MTQ-QAAGLKEGQRIKVIGCLSR 80  Alcanivorax bor...
WP_011714080  12 NEVVLSGVVVETPELRYTPAGTAVLTWVLEHRSQVEDLPPLTETTVQMHVVVLG-A-LAD-QWQGVQQGERVRVRGKLNR 88  Magnetococcus m...
2CCZ_A        87 HKA-KNGLs---KMVLHAEQIELI 106 Escherichia coli K-12
WP_005598106  92 HKD-YNGLs---QLVVHAEHIEFI 111 Actinobacillus pleuropneumoniae
WP_011329090  80 HEG-RNGLs---QLVLHAQHIERI 99  Pseudoalteromonas haloplanktis
WP_011041277  84 HES-RNGNp---LLALHAQQIEMI 103 Colwellia psychrerythraea
WP_011235167  80 HED-SNGSp---RLVLHAQHLELI 99  Idiomarina loihiensis
WP_001905464  86 QTS-RNGVg---KLVLHADKISQI 105 Vibrio cholerae
WP_011628332  86 SDQ-REDY----KLILCAKRITRL 104 Alkalilimnicola ehrlichii
WP_011073673  81 QQG-RNGQn---RLVIHAENVELK 100 Shewanella
WP_011589467  81 AGY-KGDAr--dRLQLLAQTLQSL 101 Alcanivorax borkumensis
WP_011714080  89 KRHqRNDQirwgRLELVARQVKME 112 Magnetococcus marinus
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