Conserved Protein Domain Family
DUF5641

?
pfam18701: DUF5641 
Family of unknown function (DUF5641)
This presumed domain is found in a range of retrotransposon polyproteins.
Statistics
?
PSSM-Id: 465838
Aligned: 108 rows
Threshold Bit Score: 111.813
Created: 27-Mar-2022
Updated: 17-Oct-2022
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
XP_030835101 1732 KWWRRVQYAANEFWARWRREYLQELQSRQKWVLKRRN-LEVGDIVISKENEDARGRWPLARVVDVYPS-K-DGCVRKVKI 1808
EFA13346     1488 SRFQRLQRIVQHFWSRWTREYICELQNRSKWRNNSLNaLKKGSLVIVRDDQTSPQQWRLGRVLDLHPG-H-DGIVRVVTI 1565
1_pfamImport    1 RQWRQVQHLSNTFWDRWRKQYLPTLQARKKWHSAHPN-ISPGSVVILKDSQAPRNEWPLGLVTQAFPS-E-DGKVRKVEI 77  
VDP95275      214 KRWEEGQHLTDLFWHRWLSEYLPMLQTRSKWLDIKCK-LQPGDLVLVNS------LWPKATVKQVYYD-Q-SGRVRTVRL 284 
VDP38738      498 RQWRQAQLLATTFWRRWIKEYLPLLQTRTKWTQKRRD-LQVGDLVLVIGDSYARNNWPKGLVISIDPG-E-DGLVRQAKI 574 
KZR99370      104 RRFRQSQFIVNQYWRRWMQEYVPELIERKKWNLVTPP-LRVGNRVLIMDKNTRCGQWLTGTVSKLFPG-D-DGRIRRVSV 180 
KZS10230      947 KQFLQSQAILQHFWNRWFREYVPHLTERRKWTENRPN-VTVGDLVLVIEPNTLRGQWSLRKVIEVLPSeS-DNVVRVVKV 1024
XP_001997064  373 ERFDVITAAKQQFWRRWSSDYIHELRARTKWTSSSSN-LAIGTMVIIHDDNLPAQQWKLGRIEALVPG-K-DGHVRVVHL 449 
XP_008180126  138 NRWKLLQQQQQQFWRQWSSDYLHTLQQRLKWRTPRCN-LQVDDLVAVKDDHTSPLQWPLARVIALHPN-ThDDLVRVVTI 215 
KMQ89120      910 TRWQLLRQAVEHFWTRWSSECLQRYQAISKWHHPANE-IKEGSVVLITDERYPPGKWPLARVIQLHPG-P-DGLTRVVTL 986 
XP_030835101 1809 LIADG-TldnegkrkrppveLDRPIQKLVLL 1838
EFA13346     1566 KFATQ-I-------------AKRPVAKLCVL 1582
1_pfamImport   78 KVARTgVtk----------lFLRPVSEIVLL 98  
VDP95275      285 KTATE-E-------------VKRNIRSICLL 301 
VDP38738      575 RTSKG-I-------------IIRDIRKICLL 591 
KZR99370      181 KTATS-E-------------LIRPVVKLCLF 197 
KZS10230     1025 QISNH-Kn-----------pCIRPVSKLCVM 1043
XP_001997064  450 RTANG-I-------------CWRPVHKLATL 466 
XP_008180126  216 RTAHS-T-------------YKRPITKLIKL 232 
KMQ89120      987 RISTS-I-------------YKRPIAKLCVS 1003
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap