2LJP,1A6F


Conserved Protein Domain Family
rnpA
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TIGR00188: rnpA 
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ribonuclease P protein component, eubacterial
This peptide is the protein component of a ribonucleoprotein that cleaves the leader sequence from each tRNA precursor to leave the mature 5'-terminus. The catalytic site is in the RNA component, M1 RNA. The yeast mitochondrial RNase P protein component gene RPM2 has no obvious sequence similarity to rnpA, but resembles eukaryotic nuclear RNase P instead. [Transcription, RNA processing]
Links
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Statistics
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PSSM-Id: 211560
Aligned: 11 rows
Threshold Bit Score: 97.7696
Created: 7-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
2LJP_A   4 LAFPRELRLLtpS--QFTFVFQQP--QRAGTPQITILGR---------------------LNSLGHPRIGLTVAKKNVRR 58  Escherichia coli BW2952
P06277   4 LAFPRELRLL--TpsQFTFVFQQP--QRAGTPQITILGR---------------------LNSLGHPRIGLTVAKKNVRR 58  Escherichia coli
P44306   4 LNFSRELRLL--TpiQFKNVFEQP--FRASTPEITILAR---------------------KNNLEHPRLGLTVAKKHLKR 58  Haemophilus influenza...
P25814   1 MKKRNRLKKN--E--DFQKVFKHG--TSVANRQFVLYTLd--------------------QPENDELRVGLSVSKK-IGN 53  Bacillus subtilis sub...
P50069   1 MRK-RNISLK--SkiEIQKIFKEGklIRFSNLNLKMFYK---------------------SNHLVYSRILVTFSKG-FRG 55  Borrelia burgdorferi B31
P47703  10 VKKSHSLRER--K--VFTTILQSK--TRFFGTFINAYFI---------------------KNNHSTWRVAISIAKTKYKL 62  Mycoplasma genitalium...
P75111   3 AKTKHHLRDR--K--VFAALLRSK--RRFFSTFLMAYFM---------------------PNRVRTWRAAVSISKTKYKL 55  Mycoplasma pneumoniae...
P55997  13 SKPYDSLKNK--S--EFDRVYQKG--FKKHNPFFSLFVLdlsqeppkekagfkdplfcrlKDKKTLYLLGLSVSKK-VGN 85  Helicobacter pylori 2...
P46610   2 LSACNRMRRS--S--EFDATVKFG--LRAVQSDVIIHVWrg-----------------cnRDETKAPHVGLIIAKT-VGS 57  Mycobacterium leprae TN
Q55005   1 MGLPKTLRLK--HwqDFQTVYQQG--KRHRHSNLLMRVLg--------------------DRQADHSRFGITVSQKVSKK 56  Synechocystis sp. PCC...
1A6F_A   4 LKKRNRLKKN--E--DFQKVFKHG--TSVANRQFVLYTLd--------------------QPENDELRVGLSVSKK-IGN 56  Bacillus subtilis

2LJP_A  59 AHERNRIKRLTRESFRLRQHELp--AMDFVVVAKKGVADLDNRALSEALEKLWRRHCRLA 116 Escherichia coli BW2952
P06277  59 AHERNRIKRLTRESFRLRQHELp--AMDFVVVAKKGVADLDNRALSEALEKLWRRHCRLA 116 Escherichia coli
P44306  59 AHERNRIKRLVRESFRLSQHRLp--AYDFVFVAKNGIGKLDNNTFAQILEKLWQRHIRLA 116 Haemophilus influenzae Rd KW20
P25814  54 AVMRNRIKRLIRQAFLEEKERLk--EKDYIIIARKPASQLTYEETKKSLQHLFRKSSLYK 111 Bacillus subtilis subsp. subtilis str. 168
P50069  56 SVKRNRIRRLFKEAFRKRLELLegiALDIIFVVSYGKLTLTYFSIESLMKGLVLRCERGI 115 Borrelia burgdorferi B31
P47703  63 AVQRNLIKRQIRSIFQQISNNLe--PWDILVIVNKGFIELTFKEKQKLFLQLLKRIKEVD 120 Mycoplasma genitalium G37
P75111  56 AVERNLIRRQVKAIMREQFCNLn--AVDVLVIINQGFLELTFKEKQTIFLNLCQKLQELD 113 Mycoplasma pneumoniae M129
P55997  86 AVKRNLIKRRLRSLTLKHAALCq--GLALVFVPRSDCYHLDFWALEKHFLEMLTSIKNYM 143 Helicobacter pylori 26695
P46610  58 AVERHRVARRLRHVARTMLGELg--GADQVVIRALPSSRNVSSAWLAQQLRNGLRCA-LD 114 Mycobacterium leprae TN
Q55005  57 ATVRNRLKRQIRAVINHFQPQIk-pGFDVVIIVLPQGIGCNYERFLRELEQLFSQAGIID 115 Synechocystis sp. PCC 6803 substr. Kazusa
1A6F_A  57 AVMRNRIKRLIRQAFLEEKERLk--EKDYIIIARKPASQLTYEETKKSLQHLFRksslyk 114 Bacillus subtilis
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