Conserved Protein Domain Family
TNFRSF13B

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cd13415: TNFRSF13B 
Tumor necrosis factor receptor superfamily member 13B (TNFRSF13B), also known as transmembrane activator and calcium modulator and cyclophilin ligand interactor (TACI)
TNFRSF13B (also known as transmembrane activator and calcium modulator and cyclophilin ligand interactor (TACI), CVID, RYZN, CD267, CVID2, TNFRSF14B) is mainly expressed on B cells and binds strongly to B cell activating factor (BAFF) and weakly to a proliferation-inducing ligand (APRIL). TACI-APRIL interactions induce B-cell differentiation, whereas TACI-BAFF ligation negatively regulates B-cell functions. In humans, TACI is expressed on memory B cells and TACI mutations are detected in 8-10% of common variable immunodeficiency (CVID) patients, making it the most frequently mutated gene for the disease. Coexisting morbidities in CVID include bronchiectasis, autoimmunity, and malignancies. However, TNFRSF13B/TACI defects alone do not result in CVID but may also be found frequently in distinct clinical phenotypes, including benign lymphoproliferation and IgG subclass deficiencies. Over-expression of TACI has been detected in multiple myeloma and thyroid carcinoma; correlative analyses suggest that TACI expression is a useful prognostic marker for lymphoma.
Statistics
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PSSM-Id: 276920
Aligned: 12 rows
Threshold Bit Score: 246.99
Created: 10-Oct-2012
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Feature 1:CRD1 [structural motif]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1        ########    ############# ###########################                           
NP_067324      6 CPKDQYWDssrkSCVSCALTCSQRSqRTCTDFCKFINCRKEQGRYYDHLLGACVSCDSTCTQHPQQCAHFCE-----KRP 80  house mouse
XP_003420728   8 CPKEHDWDplltACISCKLICSRRSqNICADFCKSLSCHKEPGSYYDHLLNTCISCATICGQHPKQCAHFCE-----NKF 82  African savanna...
EHB15945     119 CPEEQYWDnllsSCISCKSACSNRSqHTCAAFCKSLSCRKEQGKYYDHLLRDCISCISICGQHPKQCAHFCE-----NKL 193 naked mole-rat
EDM04675       4 CPKKQYWDslkrTCVSCVLTCSQRSqRTCTDFCKFINCRKEQGKYYDHLLGTCVSCDSTCTQHPQQCAQFCE-----KRP 78  Norway rat
XP_003800780   6 CPEEQYWDplvrTCISCKPTCSHRN-QHTCTAFCKSLCHKEQGKYYDLLLRDCISCISICGQHPKQCSYFCE-----GKL 79  small-eared galago
AES08531       8 CPEEQYWDsllnICFSCKPICSHQFpRTCAAFCKSLSCRKEEGRYYDQLLKDCISCASVCGRHPKQCTYFCE-----NKF 82  domestic ferret
EOB01441       5 CTDQQYWDalvcQCIPCSLICGRSAvRRCAALCESMVCNRKAGFYYDKLLKKCINCATVCGQHPKQCDPSCGf----NKG 80  mallard
EMC88474      14 CTDQQYWDtlvcQCIPCSLACGRHSvRRCAALCESMDCNRKPGFYYDELLKHCISCSTVCGQHPKQCATSCEkg-vfKFL 92  domestic pigeon
XP_005339533  22 CPEEKYWDsllnGCMSCRPICAQRRpSTCTAFCKSLSCLKEQGKYYDRLLKDCVSCTPICGQHPKPCEYFCE-----NKL 96  thirteen-lined ...
KFV13185       5 CTDQEYWDtlvyQCIPCSLVCSRPTvRRCAALCESMDCNRRAGSYYDELLKKCINCTTVCGQHPKQCAPSCEskavwGGW 84  red-crested turaco
KFP92449       4 CTDQQYWDtlvgQCIPCSLVCGSSTvRRCAVLCESMDCNKRAGFYYDELVRNCVNCSRVCGQHPKQCAPTCE-----SEA 78  Apaloderma vitt...
EAW55728      34 CPEEQYWDpllgTCMSCKTICNHQSqRTCAAFCRSLSCRKEQGKFYDHLLRDCISCASICGQHPKQCAYFCE-----NKL 108 human
Feature 1                                                                                        
NP_067324     81 RSqanlqp--------------------elgrpQAGEVEVRSDNSGRHQGSEHGpgl--------rlsSDQLTLYCTLGV 132 house mouse
XP_003420728  83 KErsllnlppq-------------lqrqrteegEAKPNNSGSYQGPEPRGSEAGsapqg----lklsgGQLVLVYTTLGL 145 African savanna...
EHB15945     194 RNrgnlppev---------------wrqqagevDTRSDNLGRSQGSEHRGSETGpaplg----pklsnDQLALVYCTLGL 254 naked mole-rat
EDM04675      79 RSqvnlqs--------------------elrrpETREVEARPDNLGRYQGSEHSpgl--------rmnSDQLTLYCTLGV 130 Norway rat
XP_003800780  80 RGrvnllpel---------------rrqqseeaETSSDISRRYQGSEHRGSKAGpaapg----plpsaEQLALVYSALGL 140 small-eared galago
AES08531      83 RShvnlppel---------------krqrsgeaETRSDDLGRYQGTEHRGSEAGpglk-------lsaDQLALVYSTLGL 140 domestic ferret
EOB01441      81 ELcagggsk-----------------lsfvsawPPAGALATTPPPPAALVTALPpaaaleq-kacaeqEPWLVVYLLLGL 142 mallard
EMC88474      93 PSrvllatpfpyqkvnsvkqvpegflstpvsawPTAGALLATPPAPAALGTSPApaamleq-kvcgeqEPWLVVYLLLGL 171 domestic pigeon
XP_005339533  97 RSrvnlppql---------------rrpqmgetETRSDNSGRYQGLEHRGSEAGpvlvg----pklsaDQLVLIYSTLGL 157 thirteen-lined ...
KFV13185      85 SGdagqdppgl--------------gaaaapstSNSPASIQRPKGSRAVGRRSCknptlf--qmnhlpKEEPGLSWQLQQ 148 red-crested turaco
KFP92449      79 AGeg---------------------------grGHVGNCSGLYPEAKLWGRKVPkanpfpnqtsqpreSQGFHGNCSNWG 131 Apaloderma vitt...
EAW55728     109 RSpvnlppel---------------rrqrsgevENNSDNSGRYQGLEHRGSEASpalpg----lklsaDQVALVYSTLGL 169 human
Feature 1                                                                                        
NP_067324    133 CLCAIFCCFLVAl--------------ASFLRRRGEPLPSQPAGPRGSQANSphah----------rpvtEACDEVTa-- 186 house mouse
XP_003420728 146 CLCAVVCCFLVAm--------------ACFLKRKGGQCSCQLPPRPNPAQAEssqd-----------hlmEVGSGGAg-- 198 African savanna...
EHB15945     255 CLCAIICCFLVVv--------------ACFLKRRGDVLSSQPPTELGRAQDKsshn-----------pvtKTGGALGa-- 307 naked mole-rat
EDM04675     131 CLCAIFCCFLVAl--------------ASFLRRRGEPLPSQPAGQRGSQANSphg------------pmtEARNEVAm-- 182 Norway rat
XP_003800780 141 CLCALLCCVLVVa--------------ARVLRRRGERASCQPPAGPCAVPAMssqg-----------pskEADSPGGa-- 193 small-eared galago
AES08531     141 CLCAIVCCFLLAv--------------ACFLKRRGDQFSCQPSAAPCRTQAKsskd-----------hwmEAGSAAGt-- 193 domestic ferret
EOB01441     143 CLCALICSLVLG---------------WTHLRRKGEVGSCQAGTGTCHRREDsskd-----------rlvEAGSVGDgst 196 mallard
EMC88474     172 CLCALVCSLLLG---------------WTHLRRKGEVVTCPASAGTCHRREDsckd-----------hlvEAGSVGDgct 225 domestic pigeon
XP_005339533 158 CLCTILCCFLVAv--------------GCFLKRRGGGLSSQPTAGRCRTRNKss---------------hVIVNETSh-- 206 thirteen-lined ...
KFV13185     149 WGCFGVKHCLAR---------------TTVTQTPGNPNSFKQANAAADLTSQggrtsl------fadrlvEAGSVGDgst 207 red-crested turaco
KFP92449     132 CSGATCCLLTRAvcsfqevttrpvgsiISQHRTPKFQVWRQRGFTSLCLRRKdkerkispprvagqdrlvEAGSVGDgst 211 Apaloderma vitt...
EAW55728     170 CLCAVLCCFLVAv--------------ACFLKKRGDPCSCQPRSRPRQSPAKssqd-----------hamEAGSPVSt-- 222 human
Feature 1                                    
NP_067324    187 ---sPQPVETCSFCFPE--RSSPTQESA 209 house mouse
XP_003420728 199 ---tPEPVETCSFCFPE--QRAPTEESA 221 African savanna elephant
EHB15945     308 ---sPEPVETCSFCFPE--RRAPTQESA 330 naked mole-rat
EDM04675     183 ---pPQPVETCSFCFPE--RSSPTQESA 205 Norway rat
XP_003800780 194 ---lPEPVETCSFCFPE--RRTPTQESA 216 small-eared galago
AES08531     194 ---pPEPVETCSFCFPE--RRQPTQESA 216 domestic ferret
EOB01441     197 gskvPEPVETCGFCFPG--HGSAVQESK 222 mallard
EMC88474     226 girvPEPVETCGFCFPG--HGSAVHCHS 251 domestic pigeon
XP_005339533 207 ----FELSKELRFYTSQsiHTKPKHKST 230 thirteen-lined ground squirrel
KFV13185     208 gskvPEPVETCGFCFPG--HSSAVRETK 233 red-crested turaco
KFP92449     212 gsrvPEPVETCGFCFPG--HASAVPETK 237 Apaloderma vittatum
EAW55728     223 ---sPEPVETCSFCFPE--CRAPTQESA 245 human

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