7E2Z,6G79,7CKZ,7BU7,6OS9,5ZBQ,2LNL,6KNM,6KPF,6IIV


Conserved Protein Domain Family
7tm_1

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pfam00001: 7tm_1 
7 transmembrane receptor (rhodopsin family)
This family contains, amongst other G-protein-coupled receptors (GCPRs), members of the opsin family, which have been considered to be typical members of the rhodopsin superfamily. They share several motifs, mainly the seven transmembrane helices, GCPRs of the rhodopsin superfamily. All opsins bind a chromophore, such as 11-cis-retinal. The function of most opsins other than the photoisomerases is split into two steps: light absorption and G-protein activation. Photoisomerases, on the other hand, are not coupled to G-proteins - they are thought to generate and supply the chromophore that is used by visual opsins.
Statistics
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PSSM-Id: 459624
Aligned: 63 rows
Threshold Bit Score: 106.613
Created: 28-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
7E2Z_R 174 GNACVVAAIALERSLQN-VANYLIGSLAVTDLMVsVLVLPmAALYQVl-NKWTLGQVTCDLFIALDVLCCTSSIWHLCAI 251 synthetic construct
P32246  51 GNILVVLVLVQYKRLKN-MTSIYLLNLAISDLLF-LFTLPfWIDYKLk-DDWVFGDAMCKILSGFYYTGLYSEIFFIILL 127 human
P35411  49 GNLLVVLALTNSRKSKS-ITDIYLLNLALSDLLF-VATLPfWTHYLI--SHEGLHNAMCKLTTAFFFIGFFGGIFFITVI 124 Norway rat
F5HDK1  49 lNMLVITTILYYRRKKKsPSDTYICNLAVADLLI-VVGLPfFLEYAKhhPKLS-REVVCSGLNACFYICLFAGVCFLINL 126 Human herpesvirus 5 s...
F5HF62  50 GNFLVIFTITWRRRIQC-SGDVYFINLAAADLLF-VCTLPlWMQYLL--DHNSLASVPCTLLTACFYVAMFASLCFITEI 125 Human herpesvirus 5 s...
2LNL_A  37 GNSLVMLVILYSRVGRS-VTDVYLLNLALADLLF-ALTLPiWAASKV--NGWIFGTFLCKVVSLLKEVNFYSGILLLACI 112 human
P35350  58 GNSTVVAIYAYYKKRRT-KTDVYILNLAVADLFL-LFTLPfWAVNAV--HGWVLGKIMCKVTSALYTVNFVSGMQFLACI 133 cattle
P32248  75 GNGLVVLTYIYFKRLKT-MTDTYLLNLAVADILF-LLTLPfWAYSAA--KSWVFGVHFCKLIFAIYKMSFFSGMLLLLCI 150 human
P32302  68 GNVLVLVILERHRQTRS-STETFLFHLAVADLLL-VFILPfAVAEGS--VGWVLGTFLCKTVIALHKVNFYCSSLLLACI 143 human
P35374  61 VNIVVVSLFCCQKGPKK-VSSIYIFNLALADLLL-LATLPlWATYYSyrYDWLFGPVMCKVFGSFLTLNMFASIFFITCM 138 house mouse
7E2Z_R 252 ALDRywaitdpidyvnkrtprR--AAALISLTWLIGFLISIPPM-LGWR----TPEDRsdpdaCTISKDHg--------Y 316 synthetic construct
P32246 128 TIDRylaivhavfalrartvtF--GVITSIIIWALAILASMPGLyFSKT----QWEFThh--tCSLHFPHeslrewklfQ 199 human
P35411 125 SIDRylaivlaansmnnrtvqH--GVTISLGVWAAAILVASPQFmFTKRk------DNe----CLGDYPEvlqeiwpvlR 192 Norway rat
F5HDK1 127 SMDRycvivwgvelnrvrnnkR--ATCWVVIFWILAALMGMPHYlMYSHt------NNe----CVGEFANetsgwfpvfL 194 Human herpesvirus 5 s...
F5HF62 126 ALDRyyaivym------ryrpvkqACLFSIFWWIFAVIIAIPHFmVVTKk------DNq----CMTDYDYlevs-ypiiL 188 Human herpesvirus 5 s...
2LNL_A 113 SVDRylaivhat-rtltqkrhL--VKFVCLGCWGLSMNLSLPFFlFRQAy---HPNNSsp--vCYEVLGNdtak-wrmvL 183 human
P35350 134 STDRywavtkap----sqsgvgkpCWVICFCVWVAAILLSIPQLvFYTVn--hKAr-------CVPIFPYhlgtsmkasI 200 cattle
P32248 151 SIDRyvaivqavsahrhrarvLliSKLSCVGIWILATVLSIPELlYSDLqrssSEQAMr----CSLITEHvea---fitI 223 human
P32302 144 AVDRylaivhavhayrhrrllS--IHITCGTIWLVGFLLALPEIlFAKVs--qGHHNNsl-prCTFSQENqaethawftS 218 human
P35374 139 SVDRyqsviypf-lsqrrnpwQ--ASYVVPLVWCMACLSSLPTFyFRDVr--tIEYLGvn--aCIMAFPPekyaqwsagI 211 house mouse
7E2Z_R 317 TIYSTFGAFYIPLLLMLVLYGRIFRAARFRIRKTVKkvektgadtrhgaspapqpkksvngesgsrnwrlgveskaggal 396 synthetic construct
P32246 200 ALKLNLFGLVLPLLVMIICYTGIIKILLRRPNEKKS-------------------------------------------- 235 human
P35411 193 NSEVNILGFVLPLLIMSFCYFRIVRTLFSCKNRKKA-------------------------------------------- 228 Norway rat
F5HDK1 195 NTKVNICGYLAPIVLMAYTYNRMVRFIINYVGKWHM-------------------------------------------- 230 Human herpesvirus 5 s...
F5HF62 189 NVELMLGAFVIPLSVISYCYYRISRIVAVSQSRHKG-------------------------------------------- 224 Human herpesvirus 5 s...
2LNL_A 184 RILPHTFGFIVPLFVMLFCYGFTLRTLFKAHMGQKH-------------------------------------------- 219 human
P35350 201 QILEICIGFIIPFLIMAVCYFITAKTLIKMPNIKKS-------------------------------------------- 236 cattle
P32248 224 QVAQMVIGFLVPLLAMSFCYLVIIRTLLQARNFERN-------------------------------------------- 259 human
P32302 219 RFLYHVAGFLLPMLVMGWCYVGVVHRLRQAQRRPQR-------------------------------------------- 254 human
P35374 212 ALMKNILGFIIPLIFIATCYFGIRKHLLKTNSYGKNri------------------------------------------ 249 house mouse
7E2Z_R 397 cangavrqgddgaalevievhrvgnskehlplpseagptpcapasferknernaeakrkmalareRKTVKTLGIIMGTFI 476 synthetic construct
P32246 236 ------------------------------------------------------------------KAVRLIFVIMIIFF 249 human
P35411 229 ------------------------------------------------------------------RAIRLILLVVVVFF 242 Norway rat
F5HDK1 231 ------------------------------------------------------------------QTLHVLLVVVVSFA 244 Human herpesvirus 5 s...
F5HF62 225 ------------------------------------------------------------------RIVRVLIAVVLVFI 238 Human herpesvirus 5 s...
2LNL_A 220 ------------------------------------------------------------------RAMRVIFAVVLIFL 233 human
P35350 237 ------------------------------------------------------------------QPLKVLFTVVIVFI 250 cattle
P32248 260 ------------------------------------------------------------------KAIKVIIAVVVVFI 273 human
P32302 255 -----------------------------------------------------------------QKAVRVAILVTSIFF 269 human
P35374 250 ---------------------------------------------------------------trDQVLKMAAAVVLAFI 266 house mouse
7E2Z_R 477 LCWLPFFIVALVLPF---------CESSCHMPTLLGaiinWLGYSNSLLNPVIY 521 synthetic construct
P32246 250 LFWTPYNLTILISVFqdfl-ftheCEQSRHLDLAVQvt-eVIAYTHCCVNPVIY 301 human
P35411 243 LFWTPYNIVIFLETLkfyn-ffpsCGMKRDLRWALSvt-eTVAFSHCCLNPFIY 294 Norway rat
F5HDK1 245 SFWFPFNLALFLESIrlls-gtqnETLQTVITFCLYvg-qFLAYVRACLNPGIY 296 Human herpesvirus 5 strain Merlin
F5HF62 239 IFWLPYHLTLFVDTLkllkwisssCEFERSLKRALIlt-eSLAFCHCCLNPLLY 291 Human herpesvirus 5 strain Merlin
2LNL_A 234 LCWLPYNLVLLADTLmrtqviqesCERRNNIGRALDat-eILGFLHSCLNPIIY 286 human
P35350 251 VTQLPYNIVKFCQAIdiiyslitdCDMSKRMDVAIQit-eSIALFHSCLNPVLY 303 cattle
P32248 274 VFQLPYNGVVLAQTVanfnitsstCELSKQLNIAYDvt-ySLACVRCCVNPFLY 326 human
P32302 270 LCWSPYHIVIFLDTLarlkavdntCKLNGSLPVAITmc-eFLGLAHCCLNPMLY 322 human
P35374 267 ICWLPFHVLTFLDALtwmg-iinsCEVIAVIDLALPfa-iLLGFTNSCVNPFLY 318 house mouse
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