6R99


Conserved Protein Domain Family
CLN5

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pfam15014: CLN5 
Ceroid-lipofuscinosis neuronal protein 5
Statistics
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PSSM-Id: 464446
Aligned: 10 rows
Threshold Bit Score: 511.974
Created: 26-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6R99_A       107 KRFDFRPKPDPYCQA-KYTFCPTGSP---IPVXEGDDDIEVFRLQAPVWEFKYGDLLGHLKIXHDAIGFRSTLTGKNYTX 182
EKC19641      32 RRYKSRPISNSYCKAgVIPFCPTGQIansMPKFKPDDKVQLYALKKPVWQFKFGDTLGKFHIMHDALGISNLNTGMNYTM 111
XP_005668529  56 KRFSFRPEPDPYCQA-KYTFCPTGSP---IPVMKDDDVIEVFRLQAPVWEFKYGDLLGHLKIMHDAIGFRSTLTDKNYTM 131
NP_001269123  39 RRFDFRPKSDPYCQA-RYTFCPTGSA---IPVMKEEDIIEVYRLQAPVWEFKYGDLLGHLKIMHDAVGFKSSLTGKNYTM 114
XP_003218725  25 RRFDYRPKTDPYCQA-QYTFCPTGFP---IPLMSDKDVLEVYRLQAPVWEFKVGDLFGRMKIMHDAVGFRSTLLGKNYTM 100
XP_006639091  40 RRFDHRPKPDPYCRA-LYTFCPTGLPdgtIPTMKDSDTIQVFRLQAPVWEFKYGDLLGKFDIMHDAIGFRSTLTGRNYTM 118
XP_007251755  42 KRFDRRPVTDPYCQA-LYPFCPTGDPdgrIPYMRDSDVISVFRLQTPVWEFKYGDLLGKFHIMHDAIGFSSSETGRNYTM 120
EEN56967       6 RRFDSRPKTDDFCEA-QFAFCPTGHPdgsMPKMMDSDVVEVYSMKAPVWEFKVGDLLAHFNIIHDAIGFRNKRTGLNYTM 84 
XP_023806289  82 rRFDHRPTADSYCEA-LYPFCPTGDRdgrIPYMREDDVISVYRLQTPVWEFKYGDLLGKVHIMHDAIGFSSSHTGANYTM 160 Japanese medaka
XP_005991311   1 --------------------------------MKEEDTIEVFRLQAPVWEFKYGDLLGHFKIMHDAVGFRSSLTHRNYTM 48  coelacanth
6R99_A       183 EWYELFQLGNCTFPHLRPExdAPFWCNQGAACFFEGIDDVHWKENGTLVQVATISGNXFNQXAKWVKQDNETGIYYETWN 262
EKC19641     112 EWYELFQLFNCTFPHVVND--SLLWCNQGAACIYGGIEDRLWKENGTLQLVATTNGDVFNQFAEWVLWDNTTGLYYETWT 189
XP_005668529 132 EWYELFQLGNCTFPHLRPEmnAPFWCNQGAACFFEGIDDNHWKENGTLVLVATISGNMFNKMAQWVKQDNETGIYYETWT 211
NP_001269123 115 EWYELFQLGNCTFPHLRPGmdAPFWCNQGAACFYEGIDDAHWKENGTLVLITKISGTMFNEMAKWVKYDNETGIYYETWT 194
XP_003218725 101 EWYELFQLGNCTFPHLRANlsAPFWCNQGAACFYEGIDDAHWKENGTMVQVTTISGAVFNEMAKWVKYDNDTGIYYETWA 180
XP_006639091 119 EWYELFQLGNCTFPHLRPElsAPFWCNHGAACFYEGIDDLHWKQYGTLEKVAEITGTQFNKMSEWVKQDNETGIYYETWT 198
XP_007251755 121 EWYELFQLGNCTFPHLRKDtaAPFWCNQGAACFYEGIDDEHWRQNGTLEKVGEMSGEQFNNLARWVQEDNETGIYYETWT 200
EEN56967      85 EWYELFQLFNCTFGHVLTDmdPPLWCNQGAACLYDGIDDLHWSQNGSLVKVAEVSGKIFNEMADWVHTDNNTGIYYETWM 164
XP_023806289 161 EWYELFQLGNCTFPHLRQEapAPFWCNQGAACFFEGIDDLHWSQNGTLEKIGEVTgsqFNHMAQWVQDDNRTGIYYETWT 240 Japanese medaka
XP_005991311  49 EWYELFQLGNCTFPHLRPEleTPFWCNQGAACFFEDIDDLHWKQNGSMIKVAEITGNVFNKMAKWVKEDNATGIYYETWT 128 coelacanth
6R99_A       263 VKASPekGAETWFDSYDCSKFVLRTFNKLAEFGAEFKN-IETNYTRIFLYSGEPTYLGNETSVFgptGNKTLGLAIKRFY 341
EKC19641     190 VRDKP--DGKMWFDSFDCASWVLRAFQEFGKLGVKFDQtVKLNYTRINLFSDMPKYLGNQSMVF---ANKTLGNDIMKFY 264
XP_005668529 212 VQASPekGAETWFESYDCSKFVLRTYEKLAELGAEFKk-TETNYTRIFLYSGEPTYLGNETSVFgptGNKTLALAIKRFY 290
NP_001269123 195 VQASPdkKSVVWFDSYECSKFILRTYQKLADLGATFNk-IQTNYTSIILFSGEPIYLGNETSIFgptGNKTLAAAIRDFY 273
XP_003218725 181 VKDSPerNARVWFESYECSKFVLRTYQKLAELGAIFKk-IQTNYTTVTLFSGEPTYLGNETTIFgphGNKTVAVAIRNFY 259
XP_006639091 199 VQADPspNTTVWFESYDCSKFVHRTYRKLADMGVTLKStLQTNYTRIFLYSGQPSFLGNDTTIFgdgGVKSLASDIRSFF 278
XP_007251755 201 VRSDPglNSTTWFESYDCSQFVHRTYRKIKELGAKLSSrSQTNYTKIYLYSGEPTYLGDDDSIFgqsSMKALATDIREFY 280
EEN56967     165 VRNSTgpDSKLWFEAFDCASFVIRTFDKLGELGAKFNTsVQTNYTKITLFSDQPVHLGNASTIYgpkGNKTLAAEIRTFY 244
XP_023806289 241 VRSDPapNSTVWFESYDCSQFVHRTYRKLKELGAKLSSrSPTYYTKIYLYSGEPTYLGNDSAIFgtpALQNLAADIRKFY 320 Japanese medaka
XP_005991311 129 VEAAPspNATVWFESYDCSRFVLRVYQKLAELGAAFNNkLQTNYTRIFLYSGEPTYLGNDTSIFgprGNKTLASDIKAFY 208 coelacanth
6R99_A       342 YPFKPHLPTKEFLLSLLQIFDAVIVHKQFYLFYNFEYWFLPXKFPFIKITYEEIPLP 398
EKC19641     265 SKFQAHVAGPLLIEHLISALEEILIQNKFYFFYNEEYWFLPMKSPHVKLTYNEIPLP 321
XP_005668529 291 YPFKPHLSTKEFLLSLLQIFDAVIIHRQFYLFYNFEYWFLPMKFPFIKITYEEIPLP 347
NP_001269123 274 YPFKPHKTVREFFVDLLKIIDRVILNHQFYLFYNLEYWFLPMKFPYLKVVYEEVPLP 330
XP_003218725 260 SPFKPFRSVKEFFVNLLRIVDEVVLGHQFYLFYNLEYWFLPMKYPYMRIAYEEIPLP 316
XP_006639091 279 HSFQPHQSIKDFLLSLLEVYDRVVLEKSFYLYYNFEYWHLPMKPPYIRVTYEEIPLP 335
XP_007251755 281 HSFQPHQSMIQFILSLMEAYKKVVLEKTFYLYYNFEYWHLPMKAPYIQITYEEVPLP 337
EEN56967     245 EHFQAHQPFPSLLKSMLEAFDTIVLEKKWYFFYNFEYWFLPMKEPFIKLSYEEVPLP 301
XP_023806289 321 FTFRPHQSFVDFAFTLLEAYKKIVLDKTFYLYYNFEYWHLPMKYPYMQIVYEEVPLP 377 Japanese medaka
XP_005991311 209 YPFRPHQSLKEFLISLLEIYDEVILKKTFYLYYNFGYWLLPMKSPYIKILYEEIPLP 265 coelacanth
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