Conserved Protein Domain Family
AP3_sigma

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cd14834: AP3_sigma 
AP-3 complex subunit sigma
AP-3 complex sigma subunit is part of the heterotetrameric adaptor protein (AP)-1 complex which consists of one large delta-, one beta-, one mu-, and one sigma-subunit. AP complexes link the cytosolic domains of the cargo proteins to the protein coat that induces vesicle budding in the donor compartment during vesicle transport. AP-3 binds the coat protein clathrin and the phospholipid PI(3)P and it is localized in the endosome. The sigma subunit is comprised of a single longin domain and plays a role in binding dileucine-based sorting signals.
Statistics
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PSSM-Id: 341438
Aligned: 34 rows
Threshold Bit Score: 235.2
Created: 9-Jan-2014
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Feature 1:dileucine motif interface [polypeptide binding site]
Evidence:
  • Comment:based on the homology to AP2 complex
  • Comment:dileucine motif (D/E)xxxL(L/I) is one of the two sorting signals recognized by the AP complexes

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1             ##    #                                                      ####       
EFZ12827    1 MIKAILVFNNHGKPRLSKFYQYFn-eDMQQQIIKETFQLVSKRd-dNVCNFLEGGsliggsDYKLIYRHYATLYFVFCVD 78  red fire ant
EPR60087    1 MIKAVIVVNNHGKPRLLRFYDGTp-hEKQQHILRRTYQVVSQRpgdSSCCFAEDKelf-gpETKIVYRHFATLYFIFITD 78  Toxoplasma gondii GT1
ADE76100    1 MIRAVIVINTQGKPRITKFYDPQp-vEKQQELIRDIFGVLCSRa-eNVSNFIQADaif-gpGTKLVYKHFATLYFVFVFD 77  Sitka spruce
Q8VZ37      1 MIKAVMMMNTQGKPRLAKFYDYLp-vEKQQELIRGVFSVLCSRp-eNVSNFLEIEslf-gpDSRLVYKHYATLYFVLVFD 77  thale cress
EDQ64496    1 MILAALIMNTQGKPRITKFYDHVs-vERQQEILRVVYSVLSSRs-gNLCSFVEADdif-gpDTKLVYKHFATLYFVFVID 77  Physcomitrella patens
EFJ36156    1 MIDAVLVMNTQGKPRLAKFYKSLs-pVKQQEIVRKVYTGLSSRa-eHFCNFVEADeif-gaGTKLVYKHFATLYFVFVID 77  Selaginella moelle...
GAB69321    1 MIKAVLIINNNGKPRFLRFYDDSs-hERQQMVTKRIHETIKKRitnECCCFLEDEelf-spDVKIVYRHFATLYFIFIID 78  Plasmodium cynomol...
ACI64617    1 MIKGIIIVNNSGKPRLVKFYQNVfgeQRQQSVIRRVFQQVSTRp-dSFCNYLEGSvpewgeNIKLIYRHYATLYFVFAVD 79  Thalassiosira pseu...
EME27548   36 MIRFLLIINNHGKARLTKFYSFYs-eEQQQKLVRECYALVTRRg-eEMCNFLEASfpflenDLRIIYRHYATLYFVCGVD 113 Galdieria sulphuraria
EMR10558    1 MINAIFIFNNHGKPRLTKFYTQIs-vFQQKKVVDDIYKLVSSRp-pTVCNFLEGSsliggkNLKIVYRNYATLYFVFIID 78  Pneumocystis murin...
Feature 1                    ##  #    #####                                       
EFZ12827   79 sSESELGILDLIQVFVETLDKCFENVCELDLIFHVDKVHYILNELVMGGMVLETNMTEILTRIEDQNK 146 red fire ant
EPR60087   79 eMESELGVLDLIQVFVQVLDSCFENVCELDLIYHFDKANFILDEIIVGGLVIETNVDNILQSISSVKK 146 Toxoplasma gondii GT1
ADE76100   78 sCENELAILDLIQVFVETLDKCFKNVCELDIVFNFNKLHTVLDEIIMGGQVVETNSAEVMKTVQEILK 145 Sitka spruce
Q8VZ37     78 gSENELAMLDLIQVLVETLDKCFSNVCELDIVFNYSKMHAVLDEIVFGGQVLETSSAEVMKAVEEISK 145 thale cress
EDQ64496   78 sAESELGILDLIQVFVETLDRCFKNVCELDIVYNFGKVHTILDEIVMGGQVVETSSAEVMKAVQDIWK 145 Physcomitrella patens
EFJ36156   78 sGESELGILDLIQVFVETLDSIFKNVCELDIVFNFNKVNTVLDEIVMGGQVVETNSTEIVKSVQEIFK 145 Selaginella moellendorffii
GAB69321   79 sMESELGILDLIQVFVQVLDANFENVCELDLIYNYEQINYILDEIIMGGIVLETNIDAIVSSINGAKK 146 Plasmodium cynomolgi strain B
ACI64617   80 sQESDLGILDLIQVFVEALDKRFENVCELDLIFHSDRVHYILDEIVMGGMVLETNINSILQAINDQER 147 Thalassiosira pseudonana CCMP1335
EME27548  114 aVESELGILDLIQVFVETLDRCFENVCELDIIFHPDKVHYVLDEIIVGGLVMETNVTEIYNAVQLANN 181 Galdieria sulphuraria
EMR10558   79 eTESELVILDLIQVFVEVLDKCYENVCELDLIFNFENIHVILSEIVCGGMILETNIENIVSSINYFNK 146 Pneumocystis murina B123

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