2L4X


Conserved Protein Domain Family
iscU

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TIGR01999: iscU 
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FeS cluster assembly scaffold IscU
This model represents IscU, a homolog of the N-terminal region of NifU, an Fe-S cluster assembly protein found mostly in nitrogen-fixing bacteria. IscU is considered part of the IscSUA-hscAB-fdx system of Fe-S assembly, whereas NifU is found in nitrogenase-containing (nitrogen-fixing) species. A NifU-type protein is also found in Helicobacter and Campylobacter. IscU and NifU are considered scaffold proteins on which Fe-S clusters are assembled before transfer to apoproteins. This model excludes true NifU proteins as in Klebsiella pneumoniae and Anabaena sp. as well as archaeal homologs. It includes largely proteobacterial and eukaryotic forms. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other]
Statistics
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PSSM-Id: 188192
Aligned: 10 rows
Threshold Bit Score: 226.168
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2L4X_A         3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDE-GIIEDARFKTYGCGSAIASSSLVTEWVKGKS 81  Escherichia col...
AAK85708      29 YSELAMQHYRTPVNIGTLDDDDEHVGSGLVGAPACGDVMRLQIKVGDD-GKISEAKFKTFGCGAAIASSSYATSLLQGKS 107 Giardia intesti...
AAL10761       3 YSESLLEHYKNPKNVGTLPKEDYNVGTGLVGAPSCGDVMKLQIKVDDN-GKIIDAKFKTFGCGAAIAASSLATELIKGKT 81  heartwater rick...
AAL83713      26 YSDTVHDHFRNPRNVGSLPSDDKNVGTAVVGKASCGDVVKLQVDIRD--GIIKDAKFKTFGCGSAIASTSYATELIIGKT 103 Cryptosporidium...
CAB61462      54 YHKNVLDHYNNPRNVGTLPKGDPDVGIGLVGAPACGDVMRLAIRVNKD-GVIEDVKFKTFGCGSAIASSSYVTTMVKGMT 132 fission yeast
Q9ZD61         3 YSKKVIDHYENPRNVGSLDKKKKNVGTGLVGAPACGDVMKLQIEVGDd-EIITDAKFKTFGCGSAIASSSLVTEWIKGKS 81  Rickettsia prow...
O51885         3 YSKKVMDHYENPRNVGSFSNSDSNVGSGLVGAPACGDVMKLQIKVNEq-GIIEDACFKTYGCGSAIASSSLVTEWIKGKS 81  Buchnera aphidi...
WP_007548853   3 YNEKILDHYENPRNVGSLDKNDPNVGTGLVGAPSCGDVMKLQIKVNDK-GVIEDAKFKTFGCGSAIASSSLLTEMIKGRT 81  Wolbachia
WP_002225139   3 YSDKVIDHYENPRNVGTFDKGDDSVGTGMVGAPACGDVMRLQIKVNDE-GIIEDAKFKTYGCGSAIASSSLITEWVKGKS 81  Neisseria menin...
CAA63189      27 YHPKVIDHYTNPRNVGSMDKSLANVGTGIVGAPACGDVIKLQIQVNDKsGIIENVKFKTFGCGSAIASSSYMTELVRGMS 106 baker's yeast
2L4X_A        82 LDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIADYKSKRE 126 Escherichia coli K-12
AAK85708     108 LEEASQIKNTDISDKLGLPPVKLHCSVLAEDAIRQAIDDYKRKRG 152 Giardia intestinalis
AAL10761      82 VDEAHELKNTVLAKELSLPPVKIHCSLLAEDAVKAAINDYHMKQA 126 heartwater rickettsia
AAL83713     104 TEEALKINNKTIADHLNLPPIKLHCSLLAEDAIKHAIKNYQDKQL 148 Cryptosporidium parvum
CAB61462     133 LEEASKIKNTQIAKELCLPPVKLHCSMLAEDAIKSAVKHYRSKQL 177 fission yeast
Q9ZD61        82 VEDAKEIKNTEIAKELSLPPVKLHCSLLAEDAIKAAIADYKQKRE 126 Rickettsia prowazekii str. Madrid E
O51885        82 ITEAEAIKNTSIVEELELPPVKIHCSILAEDAIKAAISDYKSKKN 126 Buchnera aphidicola str. Sg (Schizaphis graminum)
WP_007548853  82 ISDVTQIKNTQIVEELSLPPVKIHCSVLAEDAIKAAIHDYQSKQK 126 Wolbachia
WP_002225139  82 LDDALAIKNSEIAEELELPPVKIHCSILAEDAVKAAVADYRKRQE 126 Neisseria meningitidis
CAA63189     107 LDEAVKIKNTEIAKELSLPPVKLHCSMLAEDAIKAAIKDYKTKRN 151 baker's yeast
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