2RIF


Conserved Protein Domain Family
CBS_pair_arch

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cd09836: CBS_pair_arch 
Click on image for an interactive view with Cn3D
Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains
The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic generalized epilepsy, hypercalciuric nephrolithiasis, and classic Bartter syndrome (CLC chloride channel family members), Wolff-Parkinson-White syndrome (gamma 2 subunit of AMP-activated protein kinase), retinitis pigmentosa (IMP dehydrogenase-1), and homocystinuria (cystathionine beta-synthase).
Statistics
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PSSM-Id: 341405
Aligned: 58 rows
Threshold Bit Score: 109.92
Created: 6-Dec-2010
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 41 residues -Click on image for an interactive view with Cn3D
Feature 1:CBS repeat [structural motif]
Evidence:
  • None

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1         #########   #########     ######     ######  ######            #####           
2RIF_A        11 LKRPPVSLPEtATIREVATELAKnRVGLAVLTArdnpkRPVAVVSERDILRAVAqrld---ldgPAMPIANSPITVLDTD 87  Pyrobaculum aer...
ADJ15400      10 MTSPVRTTSPeTPVTEAARVLTDhGIGSLVVGEe----RIEGIVTESDVVAGVAegval-aetpVSALMSDPVVTIDPTA 84  Halalkalicoccus...
AAV47846      11 MRTPVKTISPsAPVIEAAQRLRDeDIGSLVVEDd---gSCVGIITESDIVAVTAaegdt-ralsVGDVMAETLVTVAPDA 86  Haloarcula mari...
BAA79182      20 STPPVTIEVG-RSIAEAARLMAErGVGSLIVVDkq--gLVKGILTERDIINSLAsgkac-aegkVEDIMSRNPIVASPDD 95  Aeropyrum perni...
ACL10578      10 SAPPITIKET-ESVEKAAKLMFEnNTSSVIVVNsd--gLLTGIVTAKDVVAAVAlgkig-qdipVARFMKENPLTISPDA 85  Desulfurococcus...
WP_011822300  19 TPNVITCKPD-DTVVDAARKMAKySIGSVVVVDdk--gTILGILTEGDIVRRVVargldpsrtlVRDVMTTNPVTIYSDA 95  Hyperthermus bu...
AEM39243      17 STPPVTVHRD-VSIEEAARKMYEnRIGSVLVVDee--gKLVGIVTERDILYAVVkgkvg-rglpVWDIMTDNPITAKPDE 92  Pyrolobus fumar...
BAJ48677      26 SYPPVVVSED-ATVEEAAKTMWDnGVGSILVLDkd--gTLVGIITERDILYAAShlllg-kdlkARSLMSKNLVTASPDE 101 Candidatus Cald...
BAA81505      20 ITEVVTVKPD-DPVTRAAKLMVEnLIGSVLVVDde--gRLRGIVTERDIVYVVSeawdp-tkhrVWEIMTENPIVVRPDD 95  Aeropyrum perni...
YP_004038069  11 MTDSVETTTPeTTAREAAVKLFEkEVGSLVVCRn---gSPVGIITEYDLTKLLAagtdl-dttsVSEFMSDPLITIEHDA 86  Halogeometricum...
Feature 1                                                
2RIF_A        88 PVHVAAEKMRRhNIRHVVVVNKngELVGVLSIRDLCFERA 127 Pyrobaculum aerophilum
ADJ15400      85 SVRVAGERMGRnNVKKLPVARNg-EAIGIVTTTDLARLVP 123 Halalkalicoccus jeotgali B3
AAV47846      87 DMQAAVDRLQTnNIKKLPVVEDg-SLVGIVTTTDLSDYIP 125 Haloarcula marismortui ATCC 43049
BAA79182      96 DLEIIIEKMRDmNIRHIPVIDEdgRPLGMISVRDIIDLGV 135 Aeropyrum pernix K1
ACL10578      86 HITEALEKMREfNVRHLPVVDKnnKPVGMVSVRDIMDILL 125 Desulfurococcus kamchatkensis 1221n
WP_011822300  96 TLAAAAEYMKRkGIGHLPVVNEqgRLVGIITKTDIVRLAP 135 Hyperthermus butylicus
AEM39243      93 PLIEAIERMREaNVRHLPVVDEegKPVGMLSLRDVVDYLL 132 Pyrolobus fumarii 1A
BAJ48677     102 DVASVLEKMKDfNIRHIPVVDQegKPLGVLSSRDILDFGV 141 Candidatus Caldiarchaeum subterraneum
BAA81505      96 DLLTVVRKMSEtNVRHLPVVDEkgAPVGIISFRDVLDFLM 135 Aeropyrum pernix K1
YP_004038069  87 DISEAAKMLRAkQIEHLPVTDGd-ELVGVLAAVDLSYYLP 125 Halogeometricum borinquense DSM 11551

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