Conserved Protein Domain Family
PHA03368

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PHA03368: PHA03368 
DNA packaging terminase subunit 1; Provisional
Statistics
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PSSM-Id: 223060
Aligned: 20 rows
Threshold Bit Score: 1200.63
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
148753573   1 MFGRESADLAKKYFESLRKKAADKRFARYEGSAasetpsatgpllrggheelnrgcanaardgfELAAQPEPRRVTGFQF 80 
51557524    1 MFG--LGDATRRYYADLKRKR-------------------------------------------EASERDCAEEARFFNF 35 
9625919     5 MFGRTLGEESVRYFERLKRRRDERFGTLESPTPcs----------------------------tRQGSLGNATQIPFLNF 56 
9629858     1 MFGGAVGEQSARYFQRLLRERQRRAAERGARPDg-----------------------------gGGARGEDDARVPFLDF 51 
10834884    1 MFGGALGESAKKHFERLLRDRNERLGASRKNE--------------------------------CLARGGSLVDAPFLNF 48 
13242438    1 MFGNKVGEQCIKYFQRLKRQQDEKFGAVESNISa------------------------------DSVLIQNVTRVSFLNF 50 
12084843    1 MFGGQLGSETRRHFEKLLRERNNRLGAAGRPE--------------------------------KNLRNGDIIDAPFLNF 48 
125745066   1 MFGGLLGEETKRHFERLMKTKNDRLGASHRNE--------------------------------RSIRDGDMVDAPFLNF 48 
255683197   1 MFGATFGRESRKYFEELRRKYEERNGSGDTSSS-------------------------------TANLDDSDIAVPFLNF 49 
270339484   1 MFGRSLNEQTVGYFESLKRERQARLGSLREITE-------------------------------GSTDVDDDTRVPFFNF 49 
148753573  81 AVDVSQRFQACIPPVGSLHSCCAASCMFAFAASEALYETLVADSLeaarlkvgaeyknlandsgasdGEMAPPRP----- 155
51557524   36 AIAAPQCHQTVVPAVGTLHNCCESARIFAGLARAALFGGARGRAA----------------------------------- 80 
9625919    57 AIDVTRRHQAVIPGIGTLHNCCEYIPLFSATARRAMFGAFLSSTGy--------------------nCTPNVVLKpwrys 116
9629858    52 AVAAPKRHQTVVPGVGTLHGYCELAPLFAATASRLLLTSMARAEA-----------------------------Glntgt 102
10834884   49 AISVPRRHQTVMPAVGTLHDCCDGTGIYSAIATRLLYAGIVSSEFge------------------vrRESLSNGHiskrn 110
13242438   51 AIEVAQRHQTVIPGVGTLHGCCEYVPIFTSLARQLMYTNVNRKKAnkd----------------gtgKNLHEREEnidvn 114
12084843   49 AIPIPRRHQTVIPAIGILHDSCDSAGIYSDVAARMLYTNMVYSEFdr------------------anNESPSSGRslvke 110
125745066  49 AIPVPRRHQTVMPAIGILHNCCDSLGIYSAITTRMLYSSIACSEFde------------------lrRDSVPRCYpritn 110
255683197  50 ATCVPRRHQTVIPAIGTLHDCCEHAPIFSGVARYLRFSSLLSDSS----------------------SESGETASfkrpv 107
270339484  50 SISTPQRHQTVVPAVGALHDCCESAPIFSCIARQLLFTSMVRKRI-------------------------SNDDTgeeav 104
148753573 156 --DSMLGGLRGALDELAFAQYSNADAEAHERVYDGVMAGYSDMICSDEFAQLSDFVFRFAALLKTSFKGTtgagr----- 228
51557524   81 ----VDPALARAAEALDFAAYDGERLAFHRNAYTSAMAAVDAMRTSGAFRQLRRFVNRFALLSRRSFRDAataalgtaaa 156
9625919   117 vnANVSPELKKAVSSVQFYEYSPEEAAPHRNAYSGVMNTFRAFSLSDSFCQLSTFTQRFSYLVETSFESIe--------- 187
9629858   103 geAHVSRELAGVLSALRFAAHPPAEAAAHCNAYHSVMAALESMRASGAFAQVAAFVARFSRLVGTSFSHLggg------- 175
10834884  111 reALLAPTLTRVANSITFHEYDDAQCAAHRNAYYSTMNTFGSMRTSDAFQQLASFIDRFSKLLAASFKDVni-------- 182
13242438  115 rnLIFTRELTSSVHSLHFYEYTPEEAAPHRNAYSGVMNTLNAFYTSERFTQLNMFINRFSYLLRTSFEDIef-------- 186
12084843  111 agAFLSPKMIDCASALKFKEYDDTECASHRNAYYSVMNSFVVMRTSDAFKQLVSFMDRFARLLSASFRDVkd-------- 182
125745066 111 aqAFLSPMMMRVANSIIFQEYDEMECAAHRNAYYSTMNSFISMRTSDAFKQLTVFISRFSKLLIASFRDVnk-------- 182
255683197 108 reAFLVPDMIKTFESLRFAEYGEEETIAHKNAYYSVLNAFKAMRDSDEFGQLNGFINSFARLLDTSFQDAgt-------- 179
270339484 105 sgSVLTADMLQTIQGLTFTKNDNTSSSAYRNAYYSVMNTFEALRTSDAFEQILAFVRRFNHLVDTSFRDAnfd------- 177
148753573 229 --------gayyvSPGSNKRRRLNRGNSSRNgyr-------------------prEGRLELFQKMILMHATYFAACITLD 281
51557524  157 aagpgdddgdeedGGEEEKDERARGGAKGAPgpapedaaeeghdggggegkggggRGTLELFQKMILMHAVYFLATVLLG 236
9625919   188 ------------eCGSHGKRAKVDVPIYGRY------------------------KGTLELFQKMILMHTTHFISSVLLG 231
9629858   176 ----------ddaDPPRAKRARVEPPS-GQT------------------------RGALELFQKMILMPATYFVAATLLG 220
10834884  183 -----------ldRNNAPKRARITAPSYDKP------------------------HGTLELFQKMILMHATYFLTSVLLE 227
13242438  187 ------------rENGVCKRAKIDVPVYGRH------------------------RGTLELFQKMMLMHATYFIASVLLG 230
12084843  183 -----------ldGKPTDKRMKIDIPPYGKT------------------------HGTLELFQKMILMHATYFVTSVLLG 227
125745066 183 -----------ldDHTVKKRARIDAPSYDKL------------------------HGTLELFQKMILMHATYFVTSVLLG 227
255683197 180 -----------daNTIKAKRSKVDVPTYGKM------------------------RGTLELFQKMILMHATYFLASVILG 224
270339484 178 ----------gglTRHPPKRAKVDVACYGKT------------------------RGTLELFQKMILMHATYFIASVLLG 223
148753573 282 DeSTERMDRYLAEVFNTPLFSSPALHHFKQRTSVFLVPRRHGKTWFLVPLISLLVSCFEGLRIGYTAHLRKATKPVFEEI 361
51557524  237 D-HAERATAYLLAAFDTPLFSEDAVRHFRQRVTVFLVPRRHGKTWFLVPLIALALATFRGIRVGYTAHIRKATEPVFEEI 315
9625919   232 D-HADRVDCFLRTVFNTPSVSDSVLEHFKQKSTVFLVPRRHGKTWFLVPLIALVMATFRGIKVGYTAHIRKATEPVFEGI 310
9629858   221 E-HAERIGAFLRVAFNTPDFSDAAVAHFRQRATVFLVPRRHGKTWFLVPLIALALATFKGIKIGYTAHIRKATEPVFEEI 299
10834884  228 D-HAERAERLLRVIFDIPDFSDAATRHFRQRATVFLVPRRHGKTWFLVPLIALAMSSFEGIRIGYTSHIRKAIEPVFEEI 306
13242438  231 D-HIERVEGFLSTVFDIPICSSEIALQFKQRSTVFLVPRRHGKTWFIVSLIALLMSTFRGIKVGYTAHIRKATEPVFEEI 309
12084843  228 D-HTERAERLLRIAFDTPNFSDAATRHFRQRVSVFLVPRRHGKTWFLVPLIALAMASFEGIRIGYTSHIRKAIEPVFEEI 306
125745066 228 D-HAERAERLLRVAFDTPHFSDIVTRHFRQRATVFLVPRRHGKTWFLVPLIALAMSSFEGIRIGYTSHIRKAIEPVFEDI 306
255683197 225 D-HADKADNFLRIVFDIPLFSETSLRHFRQRATVFLVPRRHGKTWFIVPLIALALTKFRGIKIGYTAHIRKATEPVFDEI 303
270339484 224 D-HAERISIFLKMVFNTPTFSDACINHFRQRATVFLVPRRHGKTWFLVPLIAVTLATIKGIKVGYTAHIRKATEPVFEEI 302
148753573 362 YARLCRWYGEDRVHQIKGETIAFSFKNGARSSIVFASSQNTNGLRGQDFNFLFVDEANFIKPGAMHTIMGFLNQTNCKLF 441
51557524  316 HARLRRWCRDARVDHVKGENITVTFPDGARSTIVFASSHNTNGIRGQDFNLLFVDEANFIRPDAVQTILGFMNQASCKII 395
9625919   311 KSRLEQWFGANYVDHVKGESITFSFTDGSYSTAVFASSHNTNGIRGQDFNLLFVDEANFIRPDAVQTIVGFLNQTNCKII 390
9629858   300 VARLRQWFGGERVDHVKGEVISFSFPDGARSTIVFASSHNTNGIRGQDFNLLFVDEANFIRPEAVQTIVGFLNQASCKII 379
10834884  307 GDRLRRWFGTQCVDHVKGETITFSFPSGSRSTVTFASSHNTNSIRGQDFNLLFVDEANFIRPDAVQTIIGFLNQANCKII 386
13242438  310 KARLEQWFGTERIEHVKGESITFSFSDGCCSTAVFSSSHNTNGIRGQTFNLLFVDEANFIRPDAVQTIVGFLNQTNCKII 389
12084843  307 GDRLRKWFGGHRVDHVKGETITFSFPSGSRSTVTFASSHNTNSIRGQDFNLLFVDEANFIRPDAVQTIIGFLNQSNCKII 386
125745066 307 GDRLRRWFGAHRVDHVKGETITFSFPSGLKSTVTFASSHNTNSIRGQDFNLLFVDEANFIRPDAVQTIIGFLNQATCKII 386
255683197 304 DARIRRWFGNGRVEHIKGETISFSFQDGSKSTVTFASSHNTNSLRGQDFNLLFVDEANFIRSDAVQTIVGFLNQTNCKII 383
270339484 303 GARLRQWFGVSRVDHVKGETISFSFPDGAKSTIVFASSHNTNGIRGQDFNLLFVDEANFIRPEAVQTIIGFLNQTNCKII 382
148753573 442 FVSSTNTGQSSTSLLYNLKGSSNSLLNVVTYICDDHLPEVQQRQNVTTCSCYVLQKPVYVTMDHSVRNTAELFVKDSFMN 521
51557524  396 FVSSTNTGKASTSFLTNLRGT--DMLNVVTYVCDEHMRRVVAHTDATACSCYVLNKPVFITMDAATRTTAERLLPDSFMQ 473
9625919   391 FVSSTNTGKASTSFLYNLRGSSDQLLNVVTYVCDDHMPRVLAHSDVTACSCYVLNKPVFITMDGAMRRTADLFMADSFVQ 470
9629858   380 FVSSTNTGKASTSFLYNLKGASDGLLNVVTYICNEHTPRVAAHGGATACSCYVLNKPVFITMDAAARNTAETFLPNSFMQ 459
10834884  387 FVSSTNSGKASTSFLYGLKGSADDLLNVVTYICDEHMKHVTNYTNATSCSCYVLNKPVFITMDGAMRRTAEMFLPDSFMK 466
13242438  390 FVSSTNTGKASTSFLYNLRNSSDRLLNVVTYVCDDHMSRVLTHNDITACSCYVLNKPVFITMDGSVRQTADLFMADSFMQ 469
12084843  387 FVSSTNSGKASTSFLYGLKGSADALLNVVTYICDEHIKHVTDYTNATSCSCYVLNKPVFITMDGTMRRTAEKFLPDSFMQ 466
125745066 387 FVSSTNSGKASTSFLYGLKGSADDLLNVVTYICDEHMKHVTDYTNATSCSCYVLNKPVFITMDGAMRRTAEMFLPDSFMQ 466
255683197 384 FVSSTNTGKSSTSFLYNLKGATDELLNVVTYICDDHMRRVANHTNATSCSCYVLNKPVFITMDGAMRRTAEMFMADSFMQ 463
270339484 383 FVSSTNTGKSSTSFLYNLRGAADELLNVVTYICDEHMQRVLTHTNATACSCYILNKPVFITMDSAMRNTAELFLQDSFLQ 462
148753573 522 EIAGGQVGN---TLSARSVIASRAMDQFLVYRPSTSNSPNVhnLSRVLTAYIDPAFTANRSASGTGIALVTELNGATVLL 598
51557524  474 EILGGAV-----AAREAPVLTRAAGERFLLYRPSSVANRRL--LAGTLHVYVDPAFTANARASGTGVAVVGSYRRSWIVL 546
9625919   471 EIVGGRKQNsggVGFDRPLFTKTARERFILYRPSTVANCAI--LSSVLYVYVDPAFTSNTRASGTGVAIVGRYKSDWIIF 548
9629858   460 EIIGGGEVAr--RAEPAAVFTRAAGEQFLLYRPSTAAARGP--WPERLYMYIDPAFTSNARASGSGIAVVGRHRGSWLVL 535
10834884  467 EIIGGITMDrntCQGDRGVFTASAVERLLLYRPSTVRNQDI--LSRDLYVYVDPAFTANTRASGTGIAVIGRYGADYIIF 544
13242438  470 ELVGGHKRDp-dSELPIPLFTKTAMDRFVLYRPSTVLNCER--LAPTLYIYIDPAFTTNVKASGTGVAIVGRYKLDFIIF 546
12084843  467 EIIGGGDIHkitCSGDRGIFTSSAIDRFLIYRPSTVHCQTN--TYPDLYVYVDPAFTANAKASGTGVAVIGRSGLDYILF 544
125745066 467 EIIGGGVVDrtiCQGDRSIFTASAIDRFLIYRPSTVNNQDP--FSQDLYVYVDPAFTANTKASGTGVAVIGKYGTDYIVF 544
255683197 464 EIIGGGEIAgneKSTNAQVFTYSSLDRFLIYRPSTVANMEI--MSQDLFVYVDPAFSANTRASGTGIAVIGRYKTDFVIY 541
270339484 463 EIIGGGPSH---KTNTELVFTKTAGERFMIYRPSTVANQSV--LSTDLYMYIDPAFTTNSRASGTGIAIVGRYNSDWIIF 537
148753573 599 GMEHFYLEALTGEAAAEIAQCANLCVAYTCLLHPGVFREVRVAVEGNSSQDSATAIALRLADLLAPLQKRLGF-----SL 673
51557524  547 GLEHFFLRALTGASADEIARCVVRCLARVLALHDGAFSAVRVAVEGNSSQDSAVAIVGAMRRELAELRAARVVad-paVV 625
9625919   549 GLEHFFLRALTGTSSSEIGRCVTQCLGHILALHPNTFTNVHVSIEGNSSQDSAVAISLAIAQQFAVLEKGNVLss-apVL 627
9629858   536 GLEHFFLPALTGSSAAEIARCAVRCFAQVMAVHRRRLDGLFVAVEGNSSQDSAVAIALGVRRELDSLAASGAVpm-paET 614
10834884  545 GLEHFFLRALTGESADAIGECAAQCIAQICAIHCERFGTIRVAVEGNSNQDSAVAIATRISIDLASYVQSGVApa-phDV 623
13242438  547 GLEHFYLRALTGTSSNEIGRCVVQCLAHVLALHPSTFSSVCIAVEGNSSQDSAVAIVTCIIQQYRDLEQSDVLqftlpSL 626
12084843  545 GLEHFFLRALTGDSVDAIGDCVAQCIIQICAIHTKRFRMIKIAVEGNSNQDSAVAIATRIALELTSYIKSGVApt-phDF 623
125745066 545 GLEHYFLRALTGESSDSIGYCVAQCLIQICAIHRKRFGVIKIAIEGNSNQDSAVAIATRIAIEMISYMKAAVApt-phNV 623
255683197 542 GLEHFFLRALTGDSATAIGLCTAICIAQICALHKRRFGTIRIAVEGNSNQDSAVAIAKCICKELTSFAKSGTApa-pkSV 620
270339484 538 GLEHFFLRALTGNSADDIGRCAAQSLAQVFALHSRPFTTVKIAVEGNSSQDSAVAIARCIQREIEELSSISIVpi-ppTI 616
148753573 674 VFAHTRQHGSSVAHPFYLLNKQKSRAFDLFISRFNSGNIMASQELVSNTVLLGNDPCEYLVEQIKNLEIVITSGD---AN 750
51557524  626 FYHHGAAGAGAVRYPFFLLQKQKTPAFDFFVKQFNSGAVMASQELVSVTVGARADPVEYLNAQLGNLVETASGAG---EH 702
9625919   628 LFYHSIPPGCSVAYPFFLLQKQKTPAVDYFVKRFNSGNIIASQELVSLTVKLGVDPVEYLCKQLDNLTEVIKGGMgnlDT 707
9629858   615 RFYHCRPPGSAVAYPFFLLQKQKTAAFDHFIRLFNSGRVVASQDLASLTVRLQTDPVEYLFEQLQNLTESTAGPG---GA 691
10834884  624 CFYHSKPAGSNVEYPFFLLQRQKTAAFDFFIARFNSGRVLASQDLVSTTISLSTDPVEYLTKQLTNLSEVVTGAT---GT 700
13242438  627 LFYHCIPPGSQVAYPFFLLQKQKTLAVDYFVKRFNSGNIIASQEIVSLTVRLGTDPVDYLCKQLNNLTELVKPGAp--DR 704
12084843  624 SFYHSSPAGTDVAYPFFLLQRQKTAAFDFFIAQFNSGRVLASQDIVSTTVSLNMDPVEYLTKQLVNLSEVVTGSA---CN 700
125745066 624 SFYHSKSNGTDVEYPYFLLQRQKTTAFDFFIAQFNSGRVLASQDLVSTTVSLTTDPVEYLTKQLTNISEVVTGPT---CT 700
255683197 621 LFYHCVPPNGDVAYPFFLLNKQKTDAFDLFIRKFNSGDVLASQELVSTTISLRTDPVEYLTRQMKNLSENISGAS---EQ 697
270339484 617 LFYHCSPPGSLVAYPFFLLQKQKTGAFDHFIRQFNSGHVLASQELVSVTVRLQTDPVEYLYSQMKNLTEVVTGPA---DT 693
148753573 751 RVYSGK--QGGkLADDVLVAVVMAAYLSFEGAPPAGYHTVSGAVC 793
51557524  703 RVFTGK--RGG-CADDLAVALVMAVHLSTLPDGLFA--------- 735
9625919   708 KTYTGKgtTGT-MSDDLMVALIMSVYIGSSCIPDSVFMPIK---- 747
9629858   692 RAFSGK--RRG-AADDLMVALVMAVFVGSLPPTDGAFCPLAPRPP 733
10834884  701 RTFSGK--KGG--YDDTVVALVMAVYISAHAS-DATFAPIRGVEA 740
13242438  705 RSYTGK--CNGsMSDDMMVALLMAVYIGGME--TSEFSPLYKPIK 745
12084843  701 RTFSGK--KGG--SDDTLVALTMAVYISTHAS-DGAFAHLTVG-- 738
125745066 701 RTFSGK--KGG--NDDTVVALTMAVYISAHIP-DMAFAPIRV--- 737
255683197 698 RTFTAK--TGG-CADDTLVALVMALYLAACFPNNETCFAHVGYVP 739
270339484 694 RTYTGK--KNG-ASDDMMVALVMAVYIGSLPPTDGSFAPLSRSL- 734
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