Conserved Protein Domain Family
Rho4_like

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cd04132: Rho4_like 
Ras homology family 4 (Rho4) of small guanosine triphosphatases (GTPases)-like
Rho4 is a GTPase that controls septum degradation by regulating secretion of Eng1 or Agn1 during cytokinesis. Rho4 also plays a role in cell morphogenesis. Rho4 regulates septation and cell morphology by controlling the actin cytoskeleton and cytoplasmic microtubules. The localization of Rho4 is modulated by Rdi1, which may function as a GDI, and by Rga9, which is believed to function as a GAP. In S. pombe, both Rho4 deletion and Rho4 overexpression result in a defective cell wall, suggesting a role for Rho4 in maintaining cell wall integrity. Most Rho proteins contain a lipid modification site at the C-terminus, with a typical sequence motif CaaX, where a = an aliphatic amino acid and X = any amino acid. Lipid binding is essential for membrane attachment, a key feature of most Rho proteins.
Statistics
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PSSM-Id: 206704
Aligned: 12 rows
Threshold Bit Score: 308.116
Created: 6-Dec-2005
Updated: 2-Oct-2020
Structure
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Aligned Rows:
  next features
Feature 1:GTP/Mg2+ binding site [chemical binding site]
Evidence:
  • Comment:Rho molecules assume an active conformation when bound to GTP and inactive when GTP is hydrolyzed to GDP
  • Comment:Mg2+ ion plays a key role in bringing together the functional regions of the phosphate-binding, switches I and II
  • Citation:PMID 9545299

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                    ######                                         ## #                 
Q00246        70 DYHLKIVVVGDGAVGKTCLLISYVQGTFPTDYIPTIFENYVTNIEgpn--gqIIELALWDTAGQEEYSRLRPLSYTNADV 147 baker's yeast
NP_055393     15 VRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQvk---gkPVHLHIWDTAGQDDYDRLRPLFYPDASV 91  human
XP_718422     73 NYNMKIVVVGDGGCGKTCLLLAYTQNKFPSIYVPTVFENYVTAVQspn--gkTVELALWDTAGQEEYDRLRPLSYPDVDI 150 Candida albican...
T37769        14 ETSKKLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITygp-nskVIELALWDTAGQEEYDRLRPLSYPNSNV 92  fission yeast
BAA91034      17 RKELKIVIVGDGGCGKTSLLMVYSQGSFPEHYAPSVFEKYTASVTvg---skEVTLNLYDTAGQEDYDRLRPLSYQNTHL 93  human
XP_759916     30 DLKKKLVVVGDGGCGKTCLLIVYSQNKFPQEYVPTVFENYVPIIQfe---gkTIELALWDTAGQEEYDRLRPLSYPESDV 106 Ustilago maydis...
AAW44798      35 DIKKKLVVVGDGGCGKTCLLTVYAENRFPEEYVPTVFENLMTTVPsptdpskIIELALWDTAGQEDFDRLRPLSYNDTDV 114 Cryptococcus ne...
AAH78131      23 RREVKIVIVGDGGCGKTSLLMVYAKGSFPEQYAPSVFEKYTTTITig---nkEYFLHLYDTAGQEDYDRLRPLSYQDVNL 99  African clawed ...
NP_001027944  16 QPKIKCVIVGDGGCGKTSMLVVYTEGEFPEVYTPTVFENYSREVEln---rkKAVLTLWDTAGQEDYDRLRPLSYNNADI 92  Ciona intestinalis
XP_500848     33 DVHIKVVVVGDGGCGKTCLLVSYSQGVFPERYIPTVFENYITTLKgpk--geIIELALWDTAGQEEYDRLRPLSYPDVDV 110 Yarrowia lipoly...
EFW94581      29 DLQFKIVIVGDSGCGKTSLLSSYIRGSFPSEYEPTIFENHRAFLQdss-qqhILTVDLWDTAGQEDYERLRRLSYQDSNL 107 Pichia angusta ...
XP_002492824  36 PIPVKVVIVGDGGCGKTCLLNVFATGTFPEAYVPTIIENVVITLVtpt--gqIAAVTLWDTAGQEEYDRLRPLSYSDVDV 113 Pichia pastoris...
Feature 1                                              # #                                       
Q00246       148 LMVCYSVGSKTSLKNVEdlWFPEVKHFCPSTPIMLVGLKSDLYeadnls------------------------------- 196 baker's yeast
NP_055393     92 LLLCFDVTSPNSFDNIFnrWYPEVNHFCKKVPIIVVGCKTDLRkdkslvnklr--------------------------- 144 human
XP_718422    151 LLVCFAVDNEVSLENVKdmWFPEVNHYCPGIPIILVGTKSDLSsdm---------------------------------- 196 Candida albican...
T37769        93 ILLCFSIDCPASLNNVTekWYPEVQHFCPRTPIVLVGLKADLRkdrnatevlr--------------------------- 145 fission yeast
BAA91034      94 VLICYDVMNPTSYDNVLikWFPEVTHFCRGIPMVLIGCKTDLRkdkeqprklr--------------------------- 146 human
XP_759916    107 ILICFAVDFPTSLANVQdkWFPEINHFCEGVPILLVGLKTDLRkdanslamlq--------------------------- 159 Ustilago maydis...
AAW44798     115 ILIVFACNHRPSLLNVQdkWYPEMAHFCENVPLILVCTKTDLRedqqtvslma--------------------------- 167 Cryptococcus ne...
AAH78131     100 VLICYDVTNPTSFDNVLikWYPEVNHFCRGVPIVLIGCKTDLRkdrerlrklr--------------------------- 152 African clawed ...
NP_001027944  93 IIICYDVTNLSSFQNVEirWSPEIRHFCPHTPTMLVACKTDLRsqvnsdsisnsmtrsasmattltttgvdltemtsstl 172 Ciona intestinalis
XP_500848    111 LLVCYSVDSPSSFENVAekWFPEVTHFCPDTPVVLVCLKTDLRadstsahylk--------------------------- 163 Yarrowia lipoly...
EFW94581     108 IILAYSLAAKDSLLNIPevWAPEILGFCDKTPIVLVGLKADVSkke---------------------------------- 153 Pichia angusta ...
XP_002492824 114 VLLCYSIDNLSTFHNVAdkWYPEVAHFCPNTPIILVGTKSDMRrhqksq------------------------------- 162 Pichia pastoris...
Feature 1                                                 ##                                     
Q00246       197 -----------------dlvepSSAESLAKRLGAfAHIQCSARLKENIDEVFETAIHTLLsdslyaprepthtiknpfkr 259 baker's yeast
NP_055393    145 -------------rnglepvtyHRGQEMARSVGAvAYLECSARLHDNVHAVFQEAAEVALssrgrn-------------- 197 human
XP_718422    197 --------------------nhDASIRVAKEIGAiGLIFTSAKTMFNVRTVFNFALNHFQrnmelqeqyektlgsrkris 256 Candida albican...
T37769       146 -------------tqgltpvtyQQAQSVALSMNA-PYVECSAKENTGVNEVFQLAVGLTIkks----------------- 194 fission yeast
BAA91034     147 -------------aaqlepityMQGLSACEQIRAaLYLECSAKFRENVEDVFREAAKVALsalkk--------------- 198 human
XP_759916    160 -------------aqgtkpvtpAQGQHVADEIGAaKYVECSAKTKDGVQNVFDTAIREACrkkgwarragvggaggakkn 226 Ustilago maydis...
AAW44798     168 -------------aqgttpisaSEGERIAKEIGArRYMECSAKAGMGVGEVFDAAIRESMkkgg---------------- 218 Cryptococcus ne...
AAH78131     153 -------------tlqqepvtyFQGEDTCKSIQAvEYLECSAKYQENIDNVFKEATLIALngmkke-------------- 205 African clawed ...
NP_001027944 173 svnsvraedgtdrhddqaivttEMGEKMSKHINVnHFVECSAKDGTNIEQVFKLAIECVIkre----------------- 235 Ciona intestinalis
XP_500848    164 -------------aqglshitpTQGKSMAQRLGVyKYMECSSKDMSGVREVFAVAMGAVLkekgrskrtkpvrsqskgaa 230 Yarrowia lipoly...
EFW94581     154 -------------------vhpEQAHNVAKSIGAvAHIECSAKQMYNVDQLFNACVNVVYnqhqaa-------------- 200 Pichia angusta ...
XP_002492824 163 ----------------phfvspQDSSQLARQMGAvMNIECSAKEVSNVNIVFDAAVSYCLsnsrpktrgdndnnrsnrrl 226 Pichia pastoris...
Feature 1                                                                                        
Q00246       260 nt------------------------------------------------------------------------------ 261 baker's yeast
NP_055393        --------------------------------------------------------------------------------     human
XP_718422    257 rvlggsnggsgnhsrhhsrnysnvsnnrrgh------------------------------------------------- 287 Candida albican...
T37769           --------------------------------------------------------------------------------     fission yeast
BAA91034         --------------------------------------------------------------------------------     human
XP_759916    227 ldptglqadahtgitivgpafshmhplsgpivaltryhyrsltdtsydhfrslvhvlvhvglpahtwacssssshplhql 306 Ustilago maydis...
AAW44798         --------------------------------------------------------------------------------     Cryptococcus ne...
AAH78131         --------------------------------------------------------------------------------     African clawed ...
NP_001027944     --------------------------------------------------------------------------------     Ciona intestinalis
XP_500848    231 aaa----------------------------------------------------------------------------- 233 Yarrowia lipoly...
EFW94581         --------------------------------------------------------------------------------     Pichia angusta ...
XP_002492824 227 srakrasmfi---------------------------------------------------------------------- 236 Pichia pastoris...
Feature 1                                                                                        
Q00246           --------------------------------------------------------------------------------     baker's yeast
NP_055393        --------------------------------------------------------------------------------     human
XP_718422        --------------------------------------------------------------------------------     Candida albican...
T37769           --------------------------------------------------------------------------------     fission yeast
BAA91034         --------------------------------------------------------------------------------     human
XP_759916    307 vflstslstlskhvsslqslshmvyfpyasttqschatprlhaqqrymsvmslmdssivrhsmqdgmwmfvlmtfenwld 386 Ustilago maydis...
AAW44798         --------------------------------------------------------------------------------     Cryptococcus ne...
AAH78131         --------------------------------------------------------------------------------     African clawed ...
NP_001027944     --------------------------------------------------------------------------------     Ciona intestinalis
XP_500848        --------------------------------------------------------------------------------     Yarrowia lipoly...
EFW94581         --------------------------------------------------------------------------------     Pichia angusta ...
XP_002492824     --------------------------------------------------------------------------------     Pichia pastoris...
Feature 1                                                                                        
Q00246           --------------------------------------------------------------------------------     baker's yeast
NP_055393        --------------------------------------------------------------------------------     human
XP_718422    288 ------------------------------------------------------lkntsydstalldqpltedtyvknpy 313 Candida albican...
T37769           --------------------------------------------------------------------------------     fission yeast
BAA91034         --------------------------------------------------------------------------------     human
XP_759916    387 lfiqvvcgsyrlcqiedrftrryrffvvildldiddmywsiqlgasaeqvladgieapffardddvgcifsflptlrcaf 466 Ustilago maydis...
AAW44798         --------------------------------------------------------------------------------     Cryptococcus ne...
AAH78131         --------------------------------------------------------------------------------     African clawed ...
NP_001027944     --------------------------------------------------------------------------------     Ciona intestinalis
XP_500848        --------------------------------------------------------------------------------     Yarrowia lipoly...
EFW94581         --------------------------------------------------------------------------------     Pichia angusta ...
XP_002492824 237 ---------------------------------------------------------------------------rgkdv 241 Pichia pastoris...
Feature 1                                         
Q00246       262 ---trsdidsstgdtsvsisgtkrlRKNKCIIM 291 baker's yeast
NP_055393    198 --------------------fwrriTQGFCVVT 210 human
XP_718422    314 gnfgykanvespynqdefaftrerkKKKKCVIL 346 Candida albicans SC5314
T37769       195 ----------------------fsfSKKSCVIL 205 fission yeast
BAA91034     199 --------------------aqrqkKRRPCLLL 211 human
XP_759916    467 dvfvsiqhghktvgpvqtrifriqiRDDVCMLG 499 Ustilago maydis 521
AAW44798     219 ---------------------lkkmKGRKCVVL 230 Cryptococcus neoformans var. neoformans JEC21
AAH78131     206 --------------------qklkrKQKNCSVL 218 African clawed frog
NP_001027944 236 ----------------------akvGPKNCCCC 246 Ciona intestinalis
XP_500848    234 --asatrpklqsrpasepiekkkkkKRHQCLVL 264 Yarrowia lipolytica CLIB99
EFW94581     201 --------------------areaaRDSKRFSK 213 Pichia angusta DL-1
XP_002492824 242 sstsgnsreelveydqdglaiipdrKKRKCSII 274 Pichia pastoris GS115

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